RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 HELZP42694 1942 aaKnown RBP5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 TRAV25A0A0B4J276 109 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 COX7A2LO14548 114 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 NXPH4O95158 308 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 LHBP01229 141 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 NDUFC2-KCTD14E9PQ53 114 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 HOXD3P31249 432 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 TMEM61Q8N0U2 210 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 OPRPNQ99935 248 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 AHCTF1Q8WYP5 2266 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 XGP55808 180 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 NPBQ8NG41 125 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 FAM110AQ9BQ89 295 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 TP73-AS1Q9UF72 201 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 MED12Q93074 2177 aa5.68□□□□□ -1.5
UBE2D3-224ENST00000508474 IGLV11-55A0A075B6I3 123 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 IGHV3-16A0A0C4DH30 117 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 A0A0G2JNJ9 132 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 E7EQL1 145 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 NEXN-AS1Q8NBZ9 246 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 MDFICQ9P1T7 246 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 Q9UFV3 132 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 OBSL1O75147 1896 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 SHANK1Q9Y566 2161 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 G3V318 75 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 CCDC179H3BU77 68 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 TMEM256-PLSCR3K7ERE1 68 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 C11orf44Q8N8P7 122 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 UBE2E2Q96LR5 201 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 C16orf54Q6UWD8 224 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 Q8N976 141 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 RNF114Q9Y508 228 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 BRWD3Q6RI45 1802 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 TRAV12-2A0A075B6T6 113 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 FAM240AA0A1B0GVK7 77 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 ZNF561-AS1K7EIQ3 104 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 COX7CP15954 63 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 PRR30Q53SZ7 412 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 RNF152Q8N8N0 203 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 PLXNB3Q9ULL4 1909 aa5.67□□□□□ -1.5
UBE2D3-224ENST00000508474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 IGKV2-29A2NJV5 120 aaPredicted RBP5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 BUB3O43684 328 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 CXCL5P42830 114 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 MP68P56378 58 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 RPL39P62891 51 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 LINC00322Q6ZN03 302 aaPredicted RBP5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 NKAPP1Q8N9T2 125 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 A0A0J9YY99 117 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 A0A1W2PRX2 142 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 FUSP35637 526 aaKnown RBP eCLIP5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 PI4KAP42356 2102 aa5.66□□□□□ -1.5
UBE2D3-224ENST00000508474 TRAV4A0A0B4J268 109 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 A0A0J9YXY3 114 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 CENPVL3A0A0U1RRI6 287 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 LECT2O14960 151 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 IGHV3-30-3P0DP02 117 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 COX7B2Q8TF08 81 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 IGKV2D-26A0A0A0MRZ7 120 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 B4DSR2 109 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 NDUFC1O43677 76 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 IGLV2-23P01705 113 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 C20orf203Q8NBC4 194 aa5.65□□□□□ -1.5
UBE2D3-224ENST00000508474 TEX22C9J3V5 150 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 CTSGP08311 255 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 ALPK3Q96L96 1907 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 IGKV1D-37A0A075B6S9 117 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 IGHV3-33P01772 117 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 HIST2H2BCQ6DN03 193 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 HIST2H2BDQ6DRA6 164 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 MAPKAPK5-AS1Q8N8E1 139 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 TMEM105Q8N8V8 129 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 ICE1Q9Y2F5 2266 aa5.65□□□□□ -1.51
UBE2D3-224ENST00000508474 YLPM1P49750 1951 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 LINC00310P59036 64 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 WFDC9Q8NEX5 89 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 COL4A3Q01955 1670 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 DAZ2Q13117 558 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 NREPQ16612 68 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 BRD3OSQ6XYD6 125 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 DAZ4Q86SG3 579 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 NFE4Q86UQ8 179 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 C20orf197Q8N268 126 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 UPK3BQ9BT76 320 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 DAZ3Q9NR90 486 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 XCL2Q9UBD3 114 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 EML6Q6ZMW3 1958 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 SMIM9A6NGZ8 99 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 M0QXV9 152 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 FRMPD3Q5JV73 1810 aa5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 MRPS12O15235 138 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 RPL18AQ02543 176 aaKnown RBP5.64□□□□□ -1.51
UBE2D3-224ENST00000508474 ABCA7Q8IZY2 2146 aa5.63□□□□□ -1.51
UBE2D3-224ENST00000508474 EIF4EBP1Q13541 118 aaPredicted RBP5.63□□□□□ -1.51
UBE2D3-224ENST00000508474 C14orf132Q9NPU4 83 aa5.63□□□□□ -1.51
UBE2D3-224ENST00000508474 DIDO1Q9BTC0 2240 aaKnown RBP5.63□□□□□ -1.51
UBE2D3-224ENST00000508474 F5H768 121 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms