RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 MRGPRG-AS1Q2M3A8 158 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNF672Q499Z4 452 aaPredicted RBP5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 BAALCQ8WXS3 180 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 DSCR8Q96T75 97 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 JPT2Q9H910 190 aa5.57□□□□□ -1.52
LIMCH1-207ENST00000508466 LYNX1G3V0Z9 82 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 LYNX1P0DP58 116 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 PLNP26678 52 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 TAL2Q16559 108 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 POU2AF1Q16633 256 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 PRSS33Q8NF86 280 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 OR10J6PQ8NGY7 276 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 TMEM167AQ8TBQ9 72 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 LINC01620Q4KN68 170 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 NRACQ8N912 160 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNF784Q8NCA9 323 aaPredicted RBP5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 C1orf162Q8NEQ5 155 aaPredicted RBP5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 TIMD4Q96H15 378 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 LINC00477Q96M19 166 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 SHANK2-AS3Q9BTD1 123 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 IGHV3-30P01768 117 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 IGHV3-30-5P0DP03 117 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 DLX6P56179 175 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 TNFAIP6P98066 277 aaPredicted RBP5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 VMA21Q3ZAQ7 101 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 ASCL5Q7RTU5 278 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 RNF152Q8N8N0 203 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 NRGNQ92686 78 aa5.56□□□□□ -1.52
LIMCH1-207ENST00000508466 SPG11Q96JI7 2443 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 TRAV13-1A0A0B4J241 112 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 CD3EP07766 207 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 KLRB1Q12918 225 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 H3BMM0 161 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 K7EM74 188 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 TRIAP1O43715 76 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 IGLV3-19P01714 112 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 CIRBPQ14011 172 aaKnown RBP5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 C5orf47Q569G3 176 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 TEX36Q5VZQ5 186 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 C9orf106Q8NAJ2 232 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 PIFOQ8TCI5 191 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 UBE2WQ96B02 151 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 TMEM101Q96IK0 257 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 RNF7Q9UBF6 113 aa5.55□□□□□ -1.52
LIMCH1-207ENST00000508466 UBE2E1P51965 193 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 NEXN-AS1Q8NBZ9 246 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNF256Q9Y2P7 627 aaPredicted RBP5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 PRRC2AP48634 2157 aaKnown RBP5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 A0A087WWL8 130 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 F5H697 171 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 IGHV3-33P01772 117 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 IGHG4P01861 327 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 HOXB4P17483 251 aaPredicted RBP5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 SETD2Q9BYW2 2564 aaPredicted RBP5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 C10orf142B7Z368 130 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 H7C423 109 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 CRYGDP07320 174 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 GFRALQ6UXV0 394 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNF833PQ6ZTB9 187 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNRF2Q8NHG8 242 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 ZNF625Q96I27 306 aaPredicted RBP5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 TP53TG1Q9Y2A0 90 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 SMAD5-AS1Q9Y6J3 95 aa5.54□□□□□ -1.52
LIMCH1-207ENST00000508466 I3L2K1 104 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 K7EIM0 57 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 LGALS9O00182 355 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 RHOHQ15669 191 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 SAP25Q8TEE9 199 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 SPXQ9BT56 116 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 SIGLEC9Q9Y336 463 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 GNRH2O43555 120 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 NDUFA7O95182 113 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 TSHBP01222 138 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 IGHV1-46P01743 117 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 COX6B1P14854 86 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 S100A4P26447 101 aaKnown RBP5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 CXCL12P48061 93 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 IL11RAQ14626 422 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 FAM74A4Q5TZK3 123 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 SMCR5Q8TEV8 140 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 AGPAT4-IT1Q9H0P7 198 aa5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 RAI1Q7Z5J4 1906 aaPredicted RBP5.53□□□□□ -1.52
LIMCH1-207ENST00000508466 TEX22C9J3V5 150 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 H3BRN7 92 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 IGKV3-15P01624 115 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 SMIM2Q9BVW6 85 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 MDFICQ9P1T7 246 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 ANKRD11Q6UB99 2663 aaPredicted RBP5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 SUMO2P61956 95 aaKnown RBP5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 PRR9Q5T870 116 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 Q6ZT83 130 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 PKIGQ9Y2B9 76 aa5.52□□□□□ -1.53
LIMCH1-207ENST00000508466 A0A087WVE0 104 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 IGKV3D-7A0A0C4DH55 119 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 F6UB75 175 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 J3QQQ9 107 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 OXTP01178 125 aa5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 LOXP28300 417 aaPredicted RBP5.51□□□□□ -1.53
LIMCH1-207ENST00000508466 SBSPONQ8IVN8 264 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms