RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 FAM210BQ96KR6 192 aa12.63□□□□□ -0.39
RNF4-209ENST00000507784 YPEL4Q96NS1 127 aa12.63□□□□□ -0.39
RNF4-209ENST00000507784 SSBP4Q9BWG4 385 aaPredicted RBP12.63□□□□□ -0.39
RNF4-209ENST00000507784 SNURFLB1AK76 121 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 M0R381 172 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 CTRLP40313 264 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 CAMPP49913 170 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 CACNG7P62955 275 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 TMEM263Q8WUH6 116 aaKnown RBP12.62□□□□□ -0.39
RNF4-209ENST00000507784 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 X6R8D5 127 aa12.62□□□□□ -0.39
RNF4-209ENST00000507784 TRBV24-1A0A075B6N3 115 aa12.61□□□□□ -0.39
RNF4-209ENST00000507784 SMIM9A6NGZ8 99 aa12.61□□□□□ -0.39
RNF4-209ENST00000507784 COLCA2A8K830 154 aa12.61□□□□□ -0.39
RNF4-209ENST00000507784 NTF3P20783 257 aa12.61□□□□□ -0.39
RNF4-209ENST00000507784 RAB4BP61018 213 aa12.61□□□□□ -0.39
RNF4-209ENST00000507784 RETNQ9HD89 108 aa12.61□□□□□ -0.39
RNF4-209ENST00000507784 EMP1P54849 157 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 ZNF493Q6ZR52 646 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 SBSPONQ8IVN8 264 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 C11orf72Q8NBR9 251 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 SYT8Q8NBV8 401 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 RNASE8Q8TDE3 154 aaKnown RBP12.6□□□□□ -0.39
RNF4-209ENST00000507784 SPXQ9BT56 116 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 SCRT2Q9NQ03 307 aa12.6□□□□□ -0.39
RNF4-209ENST00000507784 HBBP68871 147 aa12.59□□□□□ -0.39
RNF4-209ENST00000507784 ATP5L2Q7Z4Y8 100 aa12.59□□□□□ -0.39
RNF4-209ENST00000507784 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
RNF4-209ENST00000507784 MSRB1Q9NZV6 116 aa12.59□□□□□ -0.39
RNF4-209ENST00000507784 DNAH3Q8TD57 4116 aa12.59□□□□□ -0.39
RNF4-209ENST00000507784 M0R2P5 195 aa12.58□□□□□ -0.4
RNF4-209ENST00000507784 S100A8P05109 93 aa12.58□□□□□ -0.4
RNF4-209ENST00000507784 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
RNF4-209ENST00000507784 OVOL2Q9BRP0 275 aa12.58□□□□□ -0.4
RNF4-209ENST00000507784 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.4
RNF4-209ENST00000507784 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.4
RNF4-209ENST00000507784 MUC4Q99102 2169 aa12.57□□□□□ -0.4
RNF4-209ENST00000507784 A0A1B0GW15 77 aa12.57□□□□□ -0.4
RNF4-209ENST00000507784 A0A1B0GXF2 115 aa12.57□□□□□ -0.4
RNF4-209ENST00000507784 RPS10P46783 165 aaKnown RBP12.57□□□□□ -0.4
RNF4-209ENST00000507784 SMIM15Q7Z3B0 74 aa12.57□□□□□ -0.4
RNF4-209ENST00000507784 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
RNF4-209ENST00000507784 IGHV4-4A0A075B6R2 117 aa12.56□□□□□ -0.4
RNF4-209ENST00000507784 IGHV4-28A0A0C4DH34 117 aa12.56□□□□□ -0.4
RNF4-209ENST00000507784 DEFB4AO15263 64 aa12.56□□□□□ -0.4
RNF4-209ENST00000507784 MIFP14174 115 aa12.56□□□□□ -0.4
RNF4-209ENST00000507784 RAB5AP20339 215 aa12.56□□□□□ -0.4
RNF4-209ENST00000507784 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
RNF4-209ENST00000507784 CNFNQ9BYD5 112 aa12.56□□□□□ -0.4
RNF4-209ENST00000507784 TRGV1A0A0A0MS02 117 aa12.55□□□□□ -0.4
RNF4-209ENST00000507784 TRGC1P0CF51 173 aa12.55□□□□□ -0.4
RNF4-209ENST00000507784 COX19Q49B96 90 aa12.55□□□□□ -0.4
RNF4-209ENST00000507784 RASL11AQ6T310 242 aa12.55□□□□□ -0.4
RNF4-209ENST00000507784 SPATA25Q9BR10 227 aa12.55□□□□□ -0.4
RNF4-209ENST00000507784 TRAPPC1Q9Y5R8 145 aa12.55□□□□□ -0.4
RNF4-209ENST00000507784 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
RNF4-209ENST00000507784 DEFA6Q01524 100 aa12.54□□□□□ -0.4
RNF4-209ENST00000507784 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
RNF4-209ENST00000507784 IL17DQ8TAD2 202 aa12.54□□□□□ -0.4
RNF4-209ENST00000507784 FRZBQ92765 325 aa12.54□□□□□ -0.4
RNF4-209ENST00000507784 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
RNF4-209ENST00000507784 NXPH4O95158 308 aa12.53□□□□□ -0.4
RNF4-209ENST00000507784 SMIM17P0DL12 118 aa12.53□□□□□ -0.4
RNF4-209ENST00000507784 DAZ2Q13117 558 aaKnown RBP12.53□□□□□ -0.4
RNF4-209ENST00000507784 C14orf178Q8N769 122 aaPredicted RBP12.53□□□□□ -0.4
RNF4-209ENST00000507784 PTH2Q96A98 100 aa12.53□□□□□ -0.4
RNF4-209ENST00000507784 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
RNF4-209ENST00000507784 GNB1LQ9BYB4 327 aa12.53□□□□□ -0.4
RNF4-209ENST00000507784 JPT2Q9H910 190 aa12.53□□□□□ -0.4
RNF4-209ENST00000507784 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
RNF4-209ENST00000507784 GAGE12BA1L429 117 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 GAGE7O76087 117 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 EVI2AP22794 236 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 Q6ZTI0 123 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 Q8NAQ8 132 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.41
RNF4-209ENST00000507784 ZMAT4Q9H898 229 aa12.52□□□□□ -0.41
RNF4-209ENST00000507784 A0A087WWL8 130 aa12.51□□□□□ -0.41
RNF4-209ENST00000507784 HLA-DQA1P01909 254 aa12.51□□□□□ -0.41
RNF4-209ENST00000507784 APCSP02743 223 aa12.51□□□□□ -0.41
RNF4-209ENST00000507784 MGPP08493 103 aa12.51□□□□□ -0.41
RNF4-209ENST00000507784 FABP9Q0Z7S8 132 aa12.51□□□□□ -0.41
RNF4-209ENST00000507784 TMEM191AQ9H0A3 160 aa12.51□□□□□ -0.41
RNF4-209ENST00000507784 DNHD1Q96M86 4753 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 MT-ND6P03923 174 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 RASL10AQ92737 203 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 TM2D3Q9BRN9 247 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 DPH3P1Q9H4G8 78 aa12.5□□□□□ -0.41
RNF4-209ENST00000507784 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
RNF4-209ENST00000507784 IGHV3-73A0A0B4J1V6 119 aa12.49□□□□□ -0.41
RNF4-209ENST00000507784 A8MWV9 139 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms