RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ZNF747Q9BV97 191 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 NXT2Q9NPJ8 142 aaKnown RBP16.5■□□□□ 0.23
RNF4-207ENST00000506706 TRAV12-2A0A075B6T6 113 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 A0A1W2PRX2 142 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 DEFB131AP59861 70 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 SPINK13Q1W4C9 94 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 DEFB114Q30KQ6 69 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 PET117Q6UWS5 81 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 MRAP2Q96G30 205 aa16.5■□□□□ 0.23
RNF4-207ENST00000506706 CD7P09564 240 aa16.49■□□□□ 0.23
RNF4-207ENST00000506706 FHL3Q13643 280 aa16.49■□□□□ 0.23
RNF4-207ENST00000506706 SMR3AQ99954 134 aa16.49■□□□□ 0.23
RNF4-207ENST00000506706 DPH3P1Q9H4G8 78 aa16.49■□□□□ 0.23
RNF4-207ENST00000506706 ANK3Q12955 4377 aaKnown RBP16.49■□□□□ 0.23
RNF4-207ENST00000506706 LINC01546A6NGU7 62 aa16.49■□□□□ 0.23
RNF4-207ENST00000506706 HBDP02042 147 aa16.49■□□□□ 0.23
RNF4-207ENST00000506706 ZNF705AQ6ZN79 300 aaPredicted RBP16.49■□□□□ 0.23
RNF4-207ENST00000506706 TSSC4Q9Y5U2 329 aaPredicted RBP16.49■□□□□ 0.23
RNF4-207ENST00000506706 ACANP16112 2415 aa16.48■□□□□ 0.23
RNF4-207ENST00000506706 TRAV26-2A0A0B4J265 109 aa16.48■□□□□ 0.23
RNF4-207ENST00000506706 CCL24O00175 119 aa16.48■□□□□ 0.23
RNF4-207ENST00000506706 AMTNQ6UX39 209 aa16.48■□□□□ 0.23
RNF4-207ENST00000506706 NRACQ8N912 160 aa16.48■□□□□ 0.23
RNF4-207ENST00000506706 CITED2Q99967 270 aaPredicted RBP16.48■□□□□ 0.23
RNF4-207ENST00000506706 MIEN1Q9BRT3 115 aa16.48■□□□□ 0.23
RNF4-207ENST00000506706 GCN1Q92616 2671 aaKnown RBP16.48■□□□□ 0.23
RNF4-207ENST00000506706 NXPH4O95158 308 aa16.47■□□□□ 0.23
RNF4-207ENST00000506706 TRAV9-2A0A087WT02 112 aa16.47■□□□□ 0.23
RNF4-207ENST00000506706 OR4C46A6NHA9 309 aa16.47■□□□□ 0.23
RNF4-207ENST00000506706 KNCNA6PVL3 124 aa16.47■□□□□ 0.23
RNF4-207ENST00000506706 AP1S3Q96PC3 154 aa16.47■□□□□ 0.23
RNF4-207ENST00000506706 PRSS47A8MTI9 375 aa16.46■□□□□ 0.23
RNF4-207ENST00000506706 C14orf178Q8N769 122 aaPredicted RBP16.46■□□□□ 0.23
RNF4-207ENST00000506706 Q8N8P6 123 aa16.46■□□□□ 0.23
RNF4-207ENST00000506706 HLA-DRB4P13762 266 aa16.46■□□□□ 0.22
RNF4-207ENST00000506706 FXYD7P58549 80 aa16.46■□□□□ 0.22
RNF4-207ENST00000506706 DEFB125Q8N687 156 aa16.46■□□□□ 0.22
RNF4-207ENST00000506706 HLA-DRB4X5D2U9 266 aa16.46■□□□□ 0.22
RNF4-207ENST00000506706 H0Y8G0 127 aa16.45■□□□□ 0.22
RNF4-207ENST00000506706 CD300EQ496F6 205 aaPredicted RBP16.45■□□□□ 0.22
RNF4-207ENST00000506706 AGRNO00468 2067 aa16.45■□□□□ 0.22
RNF4-207ENST00000506706 IGHV1OR15-1A0A075B7D0 117 aa16.44■□□□□ 0.22
RNF4-207ENST00000506706 A8MTW9 85 aa16.44■□□□□ 0.22
RNF4-207ENST00000506706 LY6G6DO95868 133 aa16.44■□□□□ 0.22
RNF4-207ENST00000506706 MAJINQ3KP22 176 aa16.44■□□□□ 0.22
RNF4-207ENST00000506706 IGHV3-16A0A0C4DH30 117 aa16.44■□□□□ 0.22
RNF4-207ENST00000506706 H3BMM0 161 aa16.44■□□□□ 0.22
RNF4-207ENST00000506706 JMJD8Q96S16 334 aa16.44■□□□□ 0.22
RNF4-207ENST00000506706 SPAG8Q99932 426 aaPredicted RBP16.44■□□□□ 0.22
RNF4-207ENST00000506706 FASNP49327 2511 aaKnown RBP16.44■□□□□ 0.22
RNF4-207ENST00000506706 IGLV2-18A0A075B6J9 118 aa16.43■□□□□ 0.22
RNF4-207ENST00000506706 LINC01545Q5VT33 79 aa16.43■□□□□ 0.22
RNF4-207ENST00000506706 MAP6D1Q9H9H5 199 aa16.43■□□□□ 0.22
RNF4-207ENST00000506706 CUBNO60494 3623 aa16.43■□□□□ 0.22
RNF4-207ENST00000506706 TRAV25A0A0B4J276 109 aa16.42■□□□□ 0.22
RNF4-207ENST00000506706 NDUFA7O95182 113 aa16.42■□□□□ 0.22
RNF4-207ENST00000506706 MGPP08493 103 aa16.42■□□□□ 0.22
RNF4-207ENST00000506706 FCER1GP30273 86 aa16.42■□□□□ 0.22
RNF4-207ENST00000506706 Q8N1Y9 231 aa16.42■□□□□ 0.22
RNF4-207ENST00000506706 C9orf85Q96MD7 179 aa16.42■□□□□ 0.22
RNF4-207ENST00000506706 MUC4Q99102 2169 aa16.41■□□□□ 0.22
RNF4-207ENST00000506706 SMIM17P0DL12 118 aa16.41■□□□□ 0.22
RNF4-207ENST00000506706 IGLC3P0DOY3 106 aa16.41■□□□□ 0.22
RNF4-207ENST00000506706 ZNF124Q15973 351 aa16.41■□□□□ 0.22
RNF4-207ENST00000506706 MCRIP2Q9BUT9 160 aaKnown RBP16.41■□□□□ 0.22
RNF4-207ENST00000506706 MDFICQ9P1T7 246 aa16.41■□□□□ 0.22
RNF4-207ENST00000506706 ZNF256Q9Y2P7 627 aaPredicted RBP16.41■□□□□ 0.22
RNF4-207ENST00000506706 SORL1Q92673 2214 aa16.4■□□□□ 0.22
RNF4-207ENST00000506706 UQCR10Q9UDW1 63 aa16.4■□□□□ 0.22
RNF4-207ENST00000506706 IGLL1P15814 213 aa16.39■□□□□ 0.21
RNF4-207ENST00000506706 POM121L12Q8N7R1 296 aa16.39■□□□□ 0.21
RNF4-207ENST00000506706 RASL10AQ92737 203 aa16.39■□□□□ 0.21
RNF4-207ENST00000506706 IFI27L1Q96BM0 104 aa16.39■□□□□ 0.21
RNF4-207ENST00000506706 KIF25-AS1Q9Y6Z4 181 aa16.39■□□□□ 0.21
RNF4-207ENST00000506706 TRGV11A0A075B6L2 103 aa16.38■□□□□ 0.21
RNF4-207ENST00000506706 SYT8Q8NBV8 401 aa16.38■□□□□ 0.21
RNF4-207ENST00000506706 C20orf78Q9BR46 151 aa16.38■□□□□ 0.21
RNF4-207ENST00000506706 RBMY1BA6NDE4 496 aaKnown RBP16.38■□□□□ 0.21
RNF4-207ENST00000506706 RBMY1EA6NEQ0 496 aaKnown RBP16.38■□□□□ 0.21
RNF4-207ENST00000506706 PPP1R17O96001 155 aa16.38■□□□□ 0.21
RNF4-207ENST00000506706 RBMY1DP0C7P1 496 aaKnown RBP16.38■□□□□ 0.21
RNF4-207ENST00000506706 LAGE3Q14657 143 aa16.38■□□□□ 0.21
RNF4-207ENST00000506706 SMIM2Q9BVW6 85 aa16.38■□□□□ 0.21
RNF4-207ENST00000506706 TMEM158Q8WZ71 300 aa16.37■□□□□ 0.21
RNF4-207ENST00000506706 PMCHL2Q9BQD1 86 aa16.37■□□□□ 0.21
RNF4-207ENST00000506706 HSBP1L1C9JCN9 74 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 PROK1P58294 105 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 SUMO2P61956 95 aaKnown RBP16.36■□□□□ 0.21
RNF4-207ENST00000506706 NF1P21359 2839 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 RBMY1A1P0DJD3 496 aaKnown RBP16.36■□□□□ 0.21
RNF4-207ENST00000506706 RBMY1CP0DJD4 496 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 LINC00315P59091 139 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 RBMY1FQ15415 496 aaKnown RBP16.36■□□□□ 0.21
RNF4-207ENST00000506706 LGALS9BQ3B8N2 356 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 LGALS9CQ6DKI2 356 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 RPL39LQ96EH5 51 aaKnown RBP16.36■□□□□ 0.21
RNF4-207ENST00000506706 JPT2Q9H910 190 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 ST20Q9HBF5 79 aa16.36■□□□□ 0.21
RNF4-207ENST00000506706 hDV102S1A0JD36 115 aa16.35■□□□□ 0.21
RNF4-207ENST00000506706 CBY3A6NI87 242 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms