RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 B4DEV8 164 aa17.51■□□□□ 0.39
PVT1-201ENST00000504719 C6orf223Q8N319 242 aa17.51■□□□□ 0.39
PVT1-201ENST00000504719 DERL1Q9BUN8 251 aa17.51■□□□□ 0.39
PVT1-201ENST00000504719 VAX2Q9UIW0 290 aa17.51■□□□□ 0.39
PVT1-201ENST00000504719 MRPS16Q9Y3D3 137 aaKnown RBP17.51■□□□□ 0.39
PVT1-201ENST00000504719 M0R036 132 aa17.5■□□□□ 0.39
PVT1-201ENST00000504719 PAX4O43316 350 aa17.5■□□□□ 0.39
PVT1-201ENST00000504719 PDE6DO43924 150 aa17.5■□□□□ 0.39
PVT1-201ENST00000504719 SLAQ13239 276 aa17.5■□□□□ 0.39
PVT1-201ENST00000504719 FHL2Q14192 279 aa17.5■□□□□ 0.39
PVT1-201ENST00000504719 C9orf85Q96MD7 179 aa17.5■□□□□ 0.39
PVT1-201ENST00000504719 MLST8Q9BVC4 326 aa17.5■□□□□ 0.39
PVT1-201ENST00000504719 KRBOX1C9JBD0 128 aa17.49■□□□□ 0.39
PVT1-201ENST00000504719 RNASE3P12724 160 aaKnown RBP17.49■□□□□ 0.39
PVT1-201ENST00000504719 PRO0255Q9UI72 69 aa17.49■□□□□ 0.39
PVT1-201ENST00000504719 C9JCJ5 164 aa17.48■□□□□ 0.39
PVT1-201ENST00000504719 SFTA3P0C7M3 94 aa17.48■□□□□ 0.39
PVT1-201ENST00000504719 S100A4P26447 101 aaKnown RBP17.48■□□□□ 0.39
PVT1-201ENST00000504719 TAGLN2P37802 199 aaKnown RBP17.48■□□□□ 0.39
PVT1-201ENST00000504719 ASIPP42127 132 aa17.48■□□□□ 0.39
PVT1-201ENST00000504719 CRYBA4P53673 196 aa17.48■□□□□ 0.39
PVT1-201ENST00000504719 ZNF479Q96JC4 524 aa17.48■□□□□ 0.39
PVT1-201ENST00000504719 HHLA3Q9XRX5 114 aa17.48■□□□□ 0.39
PVT1-201ENST00000504719 DYNC1H1Q14204 4646 aaKnown RBP17.48■□□□□ 0.39
PVT1-201ENST00000504719 ZNF876PQ49A33 203 aa17.47■□□□□ 0.39
PVT1-201ENST00000504719 LYPD6BQ8NI32 183 aa17.47■□□□□ 0.39
PVT1-201ENST00000504719 ICOSQ9Y6W8 199 aa17.47■□□□□ 0.39
PVT1-201ENST00000504719 TRAV4A0A0B4J268 109 aa17.46■□□□□ 0.39
PVT1-201ENST00000504719 OR4C5Q8NGB2 326 aa17.46■□□□□ 0.39
PVT1-201ENST00000504719 MED9Q9NWA0 146 aa17.46■□□□□ 0.39
PVT1-201ENST00000504719 DNAH11Q96DT5 4516 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 TMSB15BA0A087X1C1 80 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 TRGV4A0A0C4DH28 118 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 GRIFINA4D1Z8 144 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 TNP2Q05952 138 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 LINC01559Q495D7 138 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 CENPWQ5EE01 88 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 TTC32Q5I0X7 151 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 PRR27Q6MZM9 219 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 KRTAP1-5Q9BYS1 174 aa17.45■□□□□ 0.38
PVT1-201ENST00000504719 KIAA1109Q2LD37 5005 aa17.44■□□□□ 0.38
PVT1-201ENST00000504719 RAB19A4D1S5 217 aa17.44■□□□□ 0.38
PVT1-201ENST00000504719 PGPEP1LA6NFU8 196 aa17.44■□□□□ 0.38
PVT1-201ENST00000504719 A0A1W2PPQ1 181 aa17.43■□□□□ 0.38
PVT1-201ENST00000504719 H3BVH4 76 aa17.43■□□□□ 0.38
PVT1-201ENST00000504719 ZNF506Q5JVG8 444 aa17.43■□□□□ 0.38
PVT1-201ENST00000504719 DNLZQ5SXM8 178 aa17.43■□□□□ 0.38
PVT1-201ENST00000504719 ZNF575Q86XF7 245 aa17.43■□□□□ 0.38
PVT1-201ENST00000504719 IL36BQ9NZH7 164 aa17.43■□□□□ 0.38
PVT1-201ENST00000504719 RBFOX3A6NFN3 312 aa17.42■□□□□ 0.38
PVT1-201ENST00000504719 PTH2Q96A98 100 aa17.42■□□□□ 0.38
PVT1-201ENST00000504719 ARMS2P0C7Q2 107 aa17.41■□□□□ 0.38
PVT1-201ENST00000504719 GNG4P50150 75 aa17.41■□□□□ 0.38
PVT1-201ENST00000504719 MRPL23Q16540 153 aaKnown RBP17.41■□□□□ 0.38
PVT1-201ENST00000504719 IGLV2-8P01709 118 aa17.4■□□□□ 0.38
PVT1-201ENST00000504719 MGST1P10620 155 aaKnown RBP17.4■□□□□ 0.38
PVT1-201ENST00000504719 RPL19P84098 196 aaKnown RBP17.4■□□□□ 0.38
PVT1-201ENST00000504719 CFAP126Q5VTH2 177 aa17.4■□□□□ 0.38
PVT1-201ENST00000504719 RS1O15537 224 aa17.39■□□□□ 0.37
PVT1-201ENST00000504719 TEX261Q6UWH6 196 aa17.39■□□□□ 0.37
PVT1-201ENST00000504719 LYPD5Q6UWN5 251 aa17.39■□□□□ 0.37
PVT1-201ENST00000504719 TRBV20OR9-2A0A075B6H5 130 aa17.38■□□□□ 0.37
PVT1-201ENST00000504719 MED14OSP0DP75 135 aa17.38■□□□□ 0.37
PVT1-201ENST00000504719 K7EQD1 137 aa17.37■□□□□ 0.37
PVT1-201ENST00000504719 SIVA1O15304 175 aa17.37■□□□□ 0.37
PVT1-201ENST00000504719 NEGR1Q7Z3B1 354 aa17.37■□□□□ 0.37
PVT1-201ENST00000504719 SMIM12Q96EX1 92 aa17.37■□□□□ 0.37
PVT1-201ENST00000504719 NXPH4O95158 308 aa17.36■□□□□ 0.37
PVT1-201ENST00000504719 BTF3P20290 206 aaKnown RBP17.36■□□□□ 0.37
PVT1-201ENST00000504719 TOR2AQ5JU69 321 aa17.36■□□□□ 0.37
PVT1-201ENST00000504719 PIK3CD-AS1Q5SR53 167 aa17.36■□□□□ 0.37
PVT1-201ENST00000504719 DMRTA1Q5VZB9 504 aa17.36■□□□□ 0.37
PVT1-201ENST00000504719 PCNPQ8WW12 178 aaKnown RBP17.36■□□□□ 0.37
PVT1-201ENST00000504719 EIF5A2Q9GZV4 153 aaKnown RBP17.36■□□□□ 0.37
PVT1-201ENST00000504719 SCRT2Q9NQ03 307 aa17.36■□□□□ 0.37
PVT1-201ENST00000504719 PHLDA3Q9Y5J5 127 aa17.36■□□□□ 0.37
PVT1-201ENST00000504719 IGHV3-73A0A0B4J1V6 119 aa17.35■□□□□ 0.37
PVT1-201ENST00000504719 GYPEP15421 78 aa17.35■□□□□ 0.37
PVT1-201ENST00000504719 SYT8Q8NBV8 401 aa17.35■□□□□ 0.37
PVT1-201ENST00000504719 TMEM250H0YL14 139 aa17.34■□□□□ 0.37
PVT1-201ENST00000504719 CIDEAO60543 219 aa17.34■□□□□ 0.37
PVT1-201ENST00000504719 GATA1P15976 413 aaPredicted RBP17.34■□□□□ 0.37
PVT1-201ENST00000504719 SRIP30626 198 aa17.34■□□□□ 0.37
PVT1-201ENST00000504719 DAZAP1Q96EP5 407 aaKnown RBP17.34■□□□□ 0.37
PVT1-201ENST00000504719 FAM210AQ96ND0 272 aa17.34■□□□□ 0.37
PVT1-201ENST00000504719 A8MWV9 139 aa17.33■□□□□ 0.36
PVT1-201ENST00000504719 CXCL1P09341 107 aa17.33■□□□□ 0.36
PVT1-201ENST00000504719 PARLQ9H300 379 aa17.33■□□□□ 0.36
PVT1-201ENST00000504719 JPT2Q9H910 190 aa17.33■□□□□ 0.36
PVT1-201ENST00000504719 M0R381 172 aa17.32■□□□□ 0.36
PVT1-201ENST00000504719 C19orf71A6NCJ1 209 aa17.31■□□□□ 0.36
PVT1-201ENST00000504719 CEBPGP53567 150 aa17.31■□□□□ 0.36
PVT1-201ENST00000504719 SLC25A29Q8N8R3 303 aa17.31■□□□□ 0.36
PVT1-201ENST00000504719 BIN3Q9NQY0 253 aa17.31■□□□□ 0.36
PVT1-201ENST00000504719 LOC100131303A0A0U1RQF7 123 aa17.3■□□□□ 0.36
PVT1-201ENST00000504719 LINC00315P59091 139 aa17.3■□□□□ 0.36
PVT1-201ENST00000504719 ZFP82Q8N141 532 aa17.3■□□□□ 0.36
PVT1-201ENST00000504719 SAMD10Q9BYL1 202 aa17.3■□□□□ 0.36
PVT1-201ENST00000504719 ZFP2Q6ZN57 461 aa17.29■□□□□ 0.36
PVT1-201ENST00000504719 OR2D3Q8NGH3 330 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms