RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ROCK2O75116 1388 aaKnown RBP0.89□□□□□ -2.27
SUB1-204ENST00000504016 TEX49A0A1B0GTD5 131 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 NUPR2A6NF83 97 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 IL5P05113 134 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 AKAIN1P0CW23 69 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 IL7P13232 177 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 S100PP25815 95 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 MEIG1Q5JSS6 88 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.89□□□□□ -2.27
SUB1-204ENST00000504016 DPH3Q96FX2 82 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 SDF2Q99470 211 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 TMEM242Q9NWH2 141 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 GNG8Q9UK08 70 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 PTPRGP23470 1445 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 NCOA3Q9Y6Q9 1424 aa0.89□□□□□ -2.27
SUB1-204ENST00000504016 MYOFQ9NZM1 2061 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 MIF4GDA9UHW6 222 aaKnown RBP0.88□□□□□ -2.27
SUB1-204ENST00000504016 APOC4-APOC2K7ER74 178 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 NCR3O14931 201 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 IGLV3-1P01715 115 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 APOC2P02655 101 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 CCKP06307 115 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 HIST1H1DP16402 221 aaKnown RBP0.88□□□□□ -2.27
SUB1-204ENST00000504016 Q56UQ5 140 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 TMEM141Q96I45 108 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 ODF3Q96PU9 254 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 TCEAL7Q9BRU2 100 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 RPRMQ9NS64 109 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 COA4Q9NYJ1 87 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 C22orf24Q9Y442 160 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 CDK5RAP2Q96SN8 1893 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 DAPK1P53355 1430 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 ERBINQ96RT1 1412 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 COL4A5P29400 1685 aa0.88□□□□□ -2.27
SUB1-204ENST00000504016 COL24A1Q17RW2 1714 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 ASCC3Q8N3C0 2202 aaKnown RBP0.87□□□□□ -2.27
SUB1-204ENST00000504016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.87□□□□□ -2.27
SUB1-204ENST00000504016 A0A1B0GV90 55 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 PIRTP0C851 137 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 CBLN1P23435 193 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 FXYD6P3P58550 94 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 FXYD4P59646 89 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 IQCJQ1A5X6 159 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 MIC13Q5XKP0 118 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 XAF1Q6GPH4 301 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 CSAG1Q6PB30 78 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 LINC00575Q6W349 94 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 Q6ZQY7 126 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 PP6455Q8WZ26 134 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 PPP3R2Q96LZ3 170 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 OBSCN-AS1Q96MR7 158 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 AMELYQ99218 206 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 AGPAT4-IT1Q9H0P7 198 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 SERP1Q9Y6X1 66 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 EXPH5Q8NEV8 1989 aa0.87□□□□□ -2.27
SUB1-204ENST00000504016 SNRNP200O75643 2136 aaKnown RBP0.86□□□□□ -2.27
SUB1-204ENST00000504016 KTN1Q86UP2 1357 aaKnown RBP0.86□□□□□ -2.27
SUB1-204ENST00000504016 TECTAO75443 2155 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 CEP192Q8TEP8 1941 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 TCRBV3S1A0A5B6 114 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 F6UZH7 168 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 CORTO00230 105 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 SNAPC5O75971 98 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 IGKCP01834 107 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 SLC25A6P12236 298 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 GNG4P50150 75 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 CAV3P56539 151 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 RPL37AP61513 92 aaKnown RBP0.86□□□□□ -2.27
SUB1-204ENST00000504016 SPRNQ5BIV9 151 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 SLC48A1Q6P1K1 146 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 Q6ZS92 163 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 CYP2G1PQ6ZSU1 146 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 DEFB132Q7Z7B7 95 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 SEC11CQ9BY50 192 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 BET1LQ9NYM9 111 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 NDUFA12Q9UI09 145 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 SYNJ1O43426 1573 aa0.86□□□□□ -2.27
SUB1-204ENST00000504016 PTPRFP10586 1907 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 TRBV30A0A0K0K1B3 111 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 CXorf51AA0A1B0GTR3 108 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 C20orf202A1L168 122 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 MCRIP1C9JLW8 97 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 M0R129 80 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 TNFP01375 233 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 TPPP2P59282 170 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 C9orf116Q5BN46 136 aaPredicted RBP0.85□□□□□ -2.27
SUB1-204ENST00000504016 FAM74A4Q5TZK3 123 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 MYOM3Q5VTT5 1437 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 GTF2H5Q6ZYL4 71 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 C8orf59Q8N0T1 100 aaPredicted RBP0.85□□□□□ -2.27
SUB1-204ENST00000504016 LIMD2Q9BT23 127 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 SCN3BQ9NY72 215 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 BICRAQ9NZM4 1560 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 IER3IP1Q9Y5U9 82 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 MYH1P12882 1939 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 CFTRP13569 1480 aa0.85□□□□□ -2.27
SUB1-204ENST00000504016 USP54Q70EL1 1684 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 FAM135AQ9P2D6 1515 aa0.84□□□□□ -2.27
SUB1-204ENST00000504016 EIF4G3O43432 1585 aaKnown RBP0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms