RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 ZNF876PQ49A33 203 aa4.52□□□□□ -1.69
LINC01340-201ENST00000504012 FANCD2OSQ96PS1 177 aa4.52□□□□□ -1.69
LINC01340-201ENST00000504012 CTSZQ9UBR2 303 aa4.52□□□□□ -1.69
LINC01340-201ENST00000504012 FER1L5A0AVI2 2057 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 IGHV4OR15-8A0A075B7B6 117 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 A0A087WW49 117 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 TRAV41A0A0B4J266 112 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 I3L2K1 104 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 M0R3E3 92 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 NTN3O00634 580 aaPredicted RBP4.51□□□□□ -1.69
LINC01340-201ENST00000504012 IGKV1-17P01599 117 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 IGHV3-9P01782 118 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 RPL27AP46776 148 aaKnown RBP4.51□□□□□ -1.69
LINC01340-201ENST00000504012 ZNF80P51504 273 aaPredicted RBP4.51□□□□□ -1.69
LINC01340-201ENST00000504012 UBE2E1P51965 193 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 ATP5EP56381 51 aaPredicted RBP4.51□□□□□ -1.69
LINC01340-201ENST00000504012 MRGPRG-AS1Q2M3A8 158 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 Q6ZT83 130 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 C1orf158Q8N1D5 194 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 MRPL53Q96EL3 112 aaKnown RBP4.51□□□□□ -1.69
LINC01340-201ENST00000504012 VSIG2Q96IQ7 327 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 C17orf77Q96MU5 243 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 DEFB118Q96PH6 123 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 DSCR8Q96T75 97 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 RNF186Q9NXI6 227 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 LENEPQ9Y5L5 61 aa4.51□□□□□ -1.69
LINC01340-201ENST00000504012 CACNA1DQ01668 2161 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 FAM236DA0A1B0GTK5 79 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 I3L3M4 83 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 SCRG1O75711 98 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 IGHG2P01859 326 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 FAM236CP0DP71 79 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 TSPEAR-AS2P59090 65 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 RHOHQ15669 191 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 ATP5EP2Q5VTU8 51 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 RNF5Q99942 180 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 C16orf95Q9H693 158 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 ZFAND3Q9H8U3 227 aa4.5□□□□□ -1.69
LINC01340-201ENST00000504012 KNTC1P50748 2209 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 IGHV7-4-1A0A0J9YVY3 117 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 TRBV10-3A0A0K0K1G6 114 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
LINC01340-201ENST00000504012 H7C2G1 150 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 COX7A2LO14548 114 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 VCYO14598 125 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 TSHBP01222 138 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 NBL1P41271 181 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 MIAQ16674 131 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 S100A7L2Q5SY68 101 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 TMEM61Q8N0U2 210 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 C14orf178Q8N769 122 aaPredicted RBP4.49□□□□□ -1.69
LINC01340-201ENST00000504012 LITAFQ99732 161 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 OVOL2Q9BRP0 275 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 RPP25Q9BUL9 199 aaKnown RBP4.49□□□□□ -1.69
LINC01340-201ENST00000504012 SLC25A15Q9Y619 301 aa4.49□□□□□ -1.69
LINC01340-201ENST00000504012 IGHV3OR16-10A0A075B7F0 116 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 IGKV2-40A0A087WW87 121 aaPredicted RBP4.48□□□□□ -1.69
LINC01340-201ENST00000504012 IGKV3D-20A0A0C4DH25 116 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 KNCNA6PVL3 124 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 TMEM178BH3BS89 294 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 NDUFC1O43677 76 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 IGKV2D-40P01614 121 aaPredicted RBP4.48□□□□□ -1.69
LINC01340-201ENST00000504012 IGHV3-48P01763 117 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 TRGV3P03979 118 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 RFPL3SP0C7P2 107 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 BAALC-AS2P0C853 105 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 GYPEP15421 78 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 SPINK2P20155 84 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 POLR2KP53803 58 aaKnown RBP4.48□□□□□ -1.69
LINC01340-201ENST00000504012 TFF2Q03403 129 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 DEFB133Q30KQ1 61 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 SPANXN1Q5VSR9 72 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 LEAP2Q969E1 77 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 PCNX2A6NKB5 2137 aa4.48□□□□□ -1.69
LINC01340-201ENST00000504012 TRAV8-3A0A0A6YYJ7 113 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 TRBV6-5A0A0K0K1A5 114 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 IGKV3-15P01624 115 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 TFF1P04155 84 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 IGF1P05019 195 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 CD164Q04900 197 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 BEAN1Q3B7T3 259 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 C10orf55Q5SWW7 151 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 RUSC1-AS1Q66K80 236 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 HCP5Q6MZN7 132 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 C9orf139Q6ZV77 190 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 GPHB5Q86YW7 130 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 DYNAPQ8N1N2 210 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 ZNRF1Q8ND25 227 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 C10orf105Q8TEF2 133 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 OBSCN-AS1Q96MR7 158 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 FAM30AQ9NZY2 134 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 PKIGQ9Y2B9 76 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 UBE2D4Q9Y2X8 147 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 TNCP24821 2201 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 CABIN1Q9Y6J0 2220 aa4.47□□□□□ -1.69
LINC01340-201ENST00000504012 IGHV1-18A0A0C4DH31 117 aa4.46□□□□□ -1.7
LINC01340-201ENST00000504012 K7EIM0 57 aa4.46□□□□□ -1.7
LINC01340-201ENST00000504012 ZNHIT1O43257 154 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms