RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 MYCNOSP40205 109 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 MAPK1IP1LQ8NDC0 245 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 HIST1H4GQ99525 98 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 ZMAT4Q9H898 229 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNF355PQ9NSJ1 428 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 FLNAP21333 2647 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 MSMBP08118 114 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNF56Q15929 161 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 PDPNQ86YL7 162 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 LINC00311Q8N616 119 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 LINC01356Q8N9X3 169 aa7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 RPUSD1Q9UJJ7 312 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNF469Q96JG9 3925 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-207ENST00000503974 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 LINC01549A6NIU2 74 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 EDDM3BP56851 147 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNF497Q6ZNH5 498 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 SHANK2-AS3Q9BTD1 123 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 CYSTM1Q9H1C7 97 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 LINC00527Q9UJ94 153 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 WDR83OSQ9Y284 106 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 TEX15Q9BXT5 2789 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 TRBV6-6A0A0A6YYG2 114 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 HSPB6O14558 160 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 AVPP01185 164 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 NTN5Q8WTR8 489 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 CCL28Q9NRJ3 127 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 CALYQ9NYX4 217 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
PDLIM5-207ENST00000503974 TMEM30CPA0ZSE6 113 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 IGKV1-39P01597 117 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 IGKV1-5P01602 117 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 IGKV1D-39P04432 117 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 CGB3P0DN86 165 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 CGB7P0DN87 165 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 PSMB8P28062 276 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 Q6ZPA2 131 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 SLC25A48Q6ZT89 311 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 MAPKAPK5-AS1Q8N8E1 139 aa7.41□□□□□ -1.22
PDLIM5-207ENST00000503974 MED13LQ71F56 2210 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 IGKV1D-13A0A0B4J2D9 117 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 EPM2AB3EWF7 344 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 H7C1H1 209 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 IGKV1-13P0DP09 117 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 UBE2D1P51668 147 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 TMEM200BQ69YZ2 307 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 IFI27L1Q96BM0 104 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 LINC00574Q9H8X3 128 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 AGRNO00468 2067 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 ARHGAP32A7KAX9 2087 aa7.4□□□□□ -1.22
PDLIM5-207ENST00000503974 FCER1GP30273 86 aa7.4□□□□□ -1.23
PDLIM5-207ENST00000503974 PAX8Q06710 450 aa7.4□□□□□ -1.23
PDLIM5-207ENST00000503974 WI2-2373I1.2A0A1W2PRP0 233 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 C17orf98A8MV24 154 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 M0R1W7 72 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 PRSS3P2Q8NHM4 247 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 DPH3P1Q9H4G8 78 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 ABCA1O95477 2261 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 A0A0U1RQV1 116 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 NPIPB11E5RHQ5 1161 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 C17orf58Q2M2W7 97 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 LINC00482Q8N8I6 264 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 ZNF714Q96N38 554 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 MRPL20Q9BYC9 149 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 C16orf95Q9H693 158 aa7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-207ENST00000503974 CCL3L1P16619 93 aa7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 ASPHD1Q5U4P2 390 aa7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 Q71RC1 249 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 STHQ8IWL8 128 aa7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 AAMDCQ9H7C9 122 aa7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 PLEKHA3Q9HB20 300 aa7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 ACANP16112 2415 aa7.38□□□□□ -1.23
PDLIM5-207ENST00000503974 MAST4O15021 2626 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 MRPS12O15235 138 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 SPINT2O43291 252 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 UPK3BQ9BT76 320 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 MAP1AP78559 2803 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 TEX49A0A1B0GTD5 131 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 CGB1A6NKQ9 187 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 C12orf77C9JDV5 145 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 LY6G6DO95868 133 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 FSHBP01225 129 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 ZNF137PP52743 207 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 TMEM30BQ3MIR4 351 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 GTSCR1Q86UQ5 136 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 C7orf69Q9H7B7 122 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 TMEM167BQ9NRX6 74 aa7.37□□□□□ -1.23
PDLIM5-207ENST00000503974 ZANQ9Y493 2812 aa7.36□□□□□ -1.23
PDLIM5-207ENST00000503974 HBDP02042 147 aa7.36□□□□□ -1.23
PDLIM5-207ENST00000503974 IGHV1-8P0DP01 117 aa7.36□□□□□ -1.23
PDLIM5-207ENST00000503974 LINC01620Q4KN68 170 aa7.36□□□□□ -1.23
PDLIM5-207ENST00000503974 DEFB121Q5J5C9 76 aa7.36□□□□□ -1.23
PDLIM5-207ENST00000503974 C1orf229Q6ZS94 237 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms