RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 C18orf15Q96N68 181 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 GOLT1BQ9Y3E0 138 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 LINC01619G3V211 115 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 J3QKU1 62 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 OR11H1Q8NG94 326 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 TMEM158Q8WZ71 300 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 DUX3Q96PT4 197 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 MUC4Q99102 2169 aa16.75■□□□□ 0.27
PCDH1-204ENST00000503492 HIST2H2BDQ6DRA6 164 aa16.74■□□□□ 0.27
PCDH1-204ENST00000503492 Q6ZSV7 163 aa16.74■□□□□ 0.27
PCDH1-204ENST00000503492 TEX29Q8N6K0 151 aa16.74■□□□□ 0.27
PCDH1-204ENST00000503492 C4orf3Q8WVX3 66 aa16.74■□□□□ 0.27
PCDH1-204ENST00000503492 ZMAT5Q9UDW3 170 aaKnown RBP16.74■□□□□ 0.27
PCDH1-204ENST00000503492 AGRNO00468 2067 aa16.74■□□□□ 0.27
PCDH1-204ENST00000503492 CHD6Q8TD26 2715 aa16.73■□□□□ 0.27
PCDH1-204ENST00000503492 TRAV12-2A0A075B6T6 113 aa16.73■□□□□ 0.27
PCDH1-204ENST00000503492 DNAJC9-AS1A6NH13 148 aa16.73■□□□□ 0.27
PCDH1-204ENST00000503492 NXPH4O95158 308 aa16.73■□□□□ 0.27
PCDH1-204ENST00000503492 CD5LO43866 347 aa16.73■□□□□ 0.27
PCDH1-204ENST00000503492 KHDC1LQ5JSQ8 128 aa16.73■□□□□ 0.27
PCDH1-204ENST00000503492 RASL10AQ92737 203 aa16.73■□□□□ 0.27
PCDH1-204ENST00000503492 TCAPO15273 167 aa16.72■□□□□ 0.27
PCDH1-204ENST00000503492 CD7P09564 240 aa16.72■□□□□ 0.27
PCDH1-204ENST00000503492 LINC00469Q8N7U9 141 aa16.72■□□□□ 0.27
PCDH1-204ENST00000503492 AP1S3Q96PC3 154 aa16.72■□□□□ 0.27
PCDH1-204ENST00000503492 SONP18583 2426 aaKnown RBP16.72■□□□□ 0.27
PCDH1-204ENST00000503492 SLC25A34Q6PIV7 304 aa16.71■□□□□ 0.27
PCDH1-204ENST00000503492 OR1N2Q8NGR9 330 aa16.71■□□□□ 0.27
PCDH1-204ENST00000503492 DPF1Q92782 380 aa16.71■□□□□ 0.27
PCDH1-204ENST00000503492 SORL1Q92673 2214 aa16.71■□□□□ 0.27
PCDH1-204ENST00000503492 CCDC168Q8NDH2 2452 aa16.71■□□□□ 0.27
PCDH1-204ENST00000503492 MGPP08493 103 aa16.71■□□□□ 0.26
PCDH1-204ENST00000503492 KRTAP1-1Q07627 177 aa16.71■□□□□ 0.26
PCDH1-204ENST00000503492 LAGE3Q14657 143 aa16.71■□□□□ 0.26
PCDH1-204ENST00000503492 SPINK13Q1W4C9 94 aa16.71■□□□□ 0.26
PCDH1-204ENST00000503492 FOXI2Q6ZQN5 318 aa16.71■□□□□ 0.26
PCDH1-204ENST00000503492 CDKN1BP46527 198 aa16.7■□□□□ 0.26
PCDH1-204ENST00000503492 STPG4Q8N801 248 aa16.7■□□□□ 0.26
PCDH1-204ENST00000503492 OR9G4Q8NGQ1 327 aa16.7■□□□□ 0.26
PCDH1-204ENST00000503492 RPL39LQ96EH5 51 aaKnown RBP16.7■□□□□ 0.26
PCDH1-204ENST00000503492 SMIM2Q9BVW6 85 aa16.7■□□□□ 0.26
PCDH1-204ENST00000503492 ESM1Q9NQ30 184 aa16.7■□□□□ 0.26
PCDH1-204ENST00000503492 DUSP14O95147 198 aaKnown RBP16.7■□□□□ 0.26
PCDH1-204ENST00000503492 HINT1P49773 126 aaPredicted RBP16.7■□□□□ 0.26
PCDH1-204ENST00000503492 KLHL30-AS1Q8NEE0 82 aa16.7■□□□□ 0.26
PCDH1-204ENST00000503492 AMTNQ6UX39 209 aa16.69■□□□□ 0.26
PCDH1-204ENST00000503492 DKK2Q9UBU2 259 aa16.69■□□□□ 0.26
PCDH1-204ENST00000503492 KIF25-AS1Q9Y6Z4 181 aa16.69■□□□□ 0.26
PCDH1-204ENST00000503492 COL5A1-AS1Q5SY13 56 aa16.69■□□□□ 0.26
PCDH1-204ENST00000503492 DLX4Q92988 240 aaPredicted RBP16.69■□□□□ 0.26
PCDH1-204ENST00000503492 SMIM17P0DL12 118 aa16.68■□□□□ 0.26
PCDH1-204ENST00000503492 LINC00315P59091 139 aa16.68■□□□□ 0.26
PCDH1-204ENST00000503492 ANKRD39Q53RE8 183 aa16.68■□□□□ 0.26
PCDH1-204ENST00000503492 PEMTQ9UBM1 199 aa16.68■□□□□ 0.26
PCDH1-204ENST00000503492 MYO9AB2RTY4 2548 aa16.68■□□□□ 0.26
PCDH1-204ENST00000503492 SUMO2P61956 95 aaKnown RBP16.67■□□□□ 0.26
PCDH1-204ENST00000503492 POM121L12Q8N7R1 296 aa16.67■□□□□ 0.26
PCDH1-204ENST00000503492 JPT2Q9H910 190 aa16.67■□□□□ 0.26
PCDH1-204ENST00000503492 FLNAP21333 2647 aaKnown RBP16.67■□□□□ 0.26
PCDH1-204ENST00000503492 KMT2BQ9UMN6 2715 aaPredicted RBP16.67■□□□□ 0.26
PCDH1-204ENST00000503492 IGHV3-16A0A0C4DH30 117 aa16.67■□□□□ 0.26
PCDH1-204ENST00000503492 C20orf78Q9BR46 151 aa16.67■□□□□ 0.26
PCDH1-204ENST00000503492 MDFICQ9P1T7 246 aa16.66■□□□□ 0.26
PCDH1-204ENST00000503492 PDZD2O15018 2839 aa16.66■□□□□ 0.26
PCDH1-204ENST00000503492 COX8AP10176 69 aa16.66■□□□□ 0.26
PCDH1-204ENST00000503492 TMEM61Q8N0U2 210 aa16.66■□□□□ 0.26
PCDH1-204ENST00000503492 C9orf85Q96MD7 179 aa16.66■□□□□ 0.26
PCDH1-204ENST00000503492 KNCNA6PVL3 124 aa16.65■□□□□ 0.26
PCDH1-204ENST00000503492 DEFB131AP59861 70 aa16.65■□□□□ 0.26
PCDH1-204ENST00000503492 ODF1Q14990 250 aa16.65■□□□□ 0.26
PCDH1-204ENST00000503492 IGHV1OR15-1A0A075B7D0 117 aa16.65■□□□□ 0.26
PCDH1-204ENST00000503492 PRSS1P07477 247 aa16.65■□□□□ 0.26
PCDH1-204ENST00000503492 Q8N1Y9 231 aa16.65■□□□□ 0.26
PCDH1-204ENST00000503492 YAE1D1Q9NRH1 226 aa16.64■□□□□ 0.25
PCDH1-204ENST00000503492 ATP5LO75964 103 aa16.63■□□□□ 0.25
PCDH1-204ENST00000503492 NUDT3O95989 172 aa16.63■□□□□ 0.25
PCDH1-204ENST00000503492 FOXC2Q99958 501 aa16.63■□□□□ 0.25
PCDH1-204ENST00000503492 TRAV2A0A0B4J234 112 aa16.62■□□□□ 0.25
PCDH1-204ENST00000503492 ZMAT4Q9H898 229 aa16.62■□□□□ 0.25
PCDH1-204ENST00000503492 A0A087WWL8 130 aa16.62■□□□□ 0.25
PCDH1-204ENST00000503492 TCTAP57738 103 aa16.62■□□□□ 0.25
PCDH1-204ENST00000503492 ZNF124Q15973 351 aa16.62■□□□□ 0.25
PCDH1-204ENST00000503492 FGF6P10767 208 aa16.61■□□□□ 0.25
PCDH1-204ENST00000503492 C11orf44Q8N8P7 122 aa16.61■□□□□ 0.25
PCDH1-204ENST00000503492 RBMY1A1P0DJD3 496 aaKnown RBP16.6■□□□□ 0.25
PCDH1-204ENST00000503492 RBMY1CP0DJD4 496 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 HLA-DRB4P13762 266 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 RBMY1FQ15415 496 aaKnown RBP16.6■□□□□ 0.25
PCDH1-204ENST00000503492 MPV17L2Q567V2 206 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 DYNLRB2Q8TF09 96 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 HLA-DRB4X5D2U9 266 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 AKAP9Q99996 3911 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 A8MTW9 85 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 DEFB114Q30KQ6 69 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 ORMDL2Q53FV1 153 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 RAX2Q96IS3 184 aa16.6■□□□□ 0.25
PCDH1-204ENST00000503492 H3BMM0 161 aa16.59■□□□□ 0.25
PCDH1-204ENST00000503492 PPP1R17O96001 155 aa16.59■□□□□ 0.25
PCDH1-204ENST00000503492 ZNF25P17030 456 aaPredicted RBP16.59■□□□□ 0.25
PCDH1-204ENST00000503492 G0S2P27469 103 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms