RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 A0A1B0GW15 77 aa19.36■□□□□ 0.69
HOXB3-212ENST00000498678 DUSP14O95147 198 aaKnown RBP19.36■□□□□ 0.69
HOXB3-212ENST00000498678 ZNF256Q9Y2P7 627 aaPredicted RBP19.36■□□□□ 0.69
HOXB3-212ENST00000498678 CYSRT1A8MQ03 144 aa19.36■□□□□ 0.69
HOXB3-212ENST00000498678 IGKV3-20P01619 116 aa19.36■□□□□ 0.69
HOXB3-212ENST00000498678 HNRNPA3P51991 378 aaKnown RBP19.36■□□□□ 0.69
HOXB3-212ENST00000498678 SORL1Q92673 2214 aa19.35■□□□□ 0.69
HOXB3-212ENST00000498678 MUC21A0A0G2JKD1 596 aa19.35■□□□□ 0.69
HOXB3-212ENST00000498678 MUC21A0A140T8X8 626 aa19.35■□□□□ 0.69
HOXB3-212ENST00000498678 MUC21Q5SSG8 566 aa19.35■□□□□ 0.69
HOXB3-212ENST00000498678 Q6ZWC4 215 aa19.35■□□□□ 0.69
HOXB3-212ENST00000498678 OR4C46A6NHA9 309 aa19.34■□□□□ 0.69
HOXB3-212ENST00000498678 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.34■□□□□ 0.69
HOXB3-212ENST00000498678 GATD1Q8NB37 220 aa19.34■□□□□ 0.69
HOXB3-212ENST00000498678 SRIP30626 198 aa19.33■□□□□ 0.69
HOXB3-212ENST00000498678 LEPP41159 167 aa19.33■□□□□ 0.69
HOXB3-212ENST00000498678 MAP6D1Q9H9H5 199 aa19.33■□□□□ 0.69
HOXB3-212ENST00000498678 KNCNA6PVL3 124 aa19.33■□□□□ 0.68
HOXB3-212ENST00000498678 TMEM256Q8N2U0 113 aa19.33■□□□□ 0.68
HOXB3-212ENST00000498678 CNFNQ9BYD5 112 aa19.33■□□□□ 0.68
HOXB3-212ENST00000498678 F2Z2F3 143 aa19.32■□□□□ 0.68
HOXB3-212ENST00000498678 IGLC3P0DOY3 106 aa19.32■□□□□ 0.68
HOXB3-212ENST00000498678 Q0VG73 95 aa19.32■□□□□ 0.68
HOXB3-212ENST00000498678 TP53TG3Q9ULZ0 132 aa19.32■□□□□ 0.68
HOXB3-212ENST00000498678 AMTNQ6UX39 209 aa19.32■□□□□ 0.68
HOXB3-212ENST00000498678 SAP30O75446 220 aa19.31■□□□□ 0.68
HOXB3-212ENST00000498678 Q6ZN92 141 aa19.31■□□□□ 0.68
HOXB3-212ENST00000498678 HLA-DRB4P13762 266 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 NTF3P20783 257 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 ANXA2RQ3ZCQ2 193 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 ZNF493Q6ZR52 646 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 CLUHP3Q96NS8 147 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 HLA-DRB4X5D2U9 266 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 AGRNO00468 2067 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 M0R2Z0 102 aa19.3■□□□□ 0.68
HOXB3-212ENST00000498678 C7orf71A4D174 169 aa19.29■□□□□ 0.68
HOXB3-212ENST00000498678 TWIST1Q15672 202 aa19.29■□□□□ 0.68
HOXB3-212ENST00000498678 A8MTW9 85 aa19.29■□□□□ 0.68
HOXB3-212ENST00000498678 H3BMM0 161 aa19.29■□□□□ 0.68
HOXB3-212ENST00000498678 SPINK13Q1W4C9 94 aa19.29■□□□□ 0.68
HOXB3-212ENST00000498678 PET117Q6UWS5 81 aa19.29■□□□□ 0.68
HOXB3-212ENST00000498678 LOC102724200A0A096LPH7 203 aaPredicted RBP19.28■□□□□ 0.68
HOXB3-212ENST00000498678 NUPR1O60356 82 aa19.28■□□□□ 0.68
HOXB3-212ENST00000498678 ZNF324O75467 553 aaPredicted RBP19.28■□□□□ 0.68
HOXB3-212ENST00000498678 TSPOP30536 169 aa19.28■□□□□ 0.68
HOXB3-212ENST00000498678 VAMP3Q15836 100 aa19.28■□□□□ 0.68
HOXB3-212ENST00000498678 SPATA45Q537H7 98 aa19.28■□□□□ 0.68
HOXB3-212ENST00000498678 OR10J3Q5JRS4 329 aa19.28■□□□□ 0.68
HOXB3-212ENST00000498678 TRAV12-2A0A075B6T6 113 aa19.27■□□□□ 0.68
HOXB3-212ENST00000498678 TRAV12-3A0A0B4J271 114 aa19.27■□□□□ 0.68
HOXB3-212ENST00000498678 SCGB1A1P11684 91 aa19.27■□□□□ 0.68
HOXB3-212ENST00000498678 MSRB1Q9NZV6 116 aa19.27■□□□□ 0.68
HOXB3-212ENST00000498678 SNAI2O43623 268 aa19.27■□□□□ 0.68
HOXB3-212ENST00000498678 OR5AL1P0C617 328 aa19.27■□□□□ 0.68
HOXB3-212ENST00000498678 LINC00310P59036 64 aa19.27■□□□□ 0.68
HOXB3-212ENST00000498678 IGLV1-51P01701 117 aa19.26■□□□□ 0.67
HOXB3-212ENST00000498678 PF4P02776 101 aa19.26■□□□□ 0.67
HOXB3-212ENST00000498678 BAGE3Q86Y29 109 aa19.26■□□□□ 0.67
HOXB3-212ENST00000498678 ODF3L2Q3SX64 289 aa19.26■□□□□ 0.67
HOXB3-212ENST00000498678 LINC00482Q8N8I6 264 aa19.25■□□□□ 0.67
HOXB3-212ENST00000498678 OR10AG1Q8NH19 301 aa19.25■□□□□ 0.67
HOXB3-212ENST00000498678 C18orf32Q8TCD1 76 aa19.25■□□□□ 0.67
HOXB3-212ENST00000498678 H3BVH4 76 aa19.25■□□□□ 0.67
HOXB3-212ENST00000498678 GNRH2O43555 120 aa19.25■□□□□ 0.67
HOXB3-212ENST00000498678 SERF1AO75920 110 aa19.24■□□□□ 0.67
HOXB3-212ENST00000498678 RBMY1BA6NDE4 496 aaKnown RBP19.23■□□□□ 0.67
HOXB3-212ENST00000498678 RBMY1EA6NEQ0 496 aaKnown RBP19.23■□□□□ 0.67
HOXB3-212ENST00000498678 RBMY1DP0C7P1 496 aaKnown RBP19.23■□□□□ 0.67
HOXB3-212ENST00000498678 ASIPP42127 132 aa19.23■□□□□ 0.67
HOXB3-212ENST00000498678 FAM159AQ6UWV7 190 aa19.23■□□□□ 0.67
HOXB3-212ENST00000498678 NIT1Q86X76 327 aa19.23■□□□□ 0.67
HOXB3-212ENST00000498678 FAM104BQ5XKR9 115 aa19.23■□□□□ 0.67
HOXB3-212ENST00000498678 CITED1Q99966 193 aa19.23■□□□□ 0.67
HOXB3-212ENST00000498678 IGHV4-4A0A075B6R2 117 aa19.22■□□□□ 0.67
HOXB3-212ENST00000498678 S100A4P26447 101 aaKnown RBP19.22■□□□□ 0.67
HOXB3-212ENST00000498678 FXYD7P58549 80 aa19.22■□□□□ 0.67
HOXB3-212ENST00000498678 AMN1Q8IY45 258 aa19.22■□□□□ 0.67
HOXB3-212ENST00000498678 OR2K2Q8NGT1 345 aa19.22■□□□□ 0.67
HOXB3-212ENST00000498678 RCHY1Q96PM5 261 aa19.22■□□□□ 0.67
HOXB3-212ENST00000498678 TMEM191AQ9H0A3 160 aa19.22■□□□□ 0.67
HOXB3-212ENST00000498678 KCNS1Q96KK3 526 aa19.21■□□□□ 0.67
HOXB3-212ENST00000498678 TIMM8BQ9Y5J9 83 aaPredicted RBP19.21■□□□□ 0.67
HOXB3-212ENST00000498678 MED14OSP0DP75 135 aa19.2■□□□□ 0.66
HOXB3-212ENST00000498678 Q8N976 141 aa19.2■□□□□ 0.66
HOXB3-212ENST00000498678 RNASE3P12724 160 aaKnown RBP19.2■□□□□ 0.66
HOXB3-212ENST00000498678 CACNG7P62955 275 aa19.2■□□□□ 0.66
HOXB3-212ENST00000498678 SCRT2Q9NQ03 307 aa19.2■□□□□ 0.66
HOXB3-212ENST00000498678 NIPBLQ6KC79 2804 aaeCLIP19.19■□□□□ 0.662e-6■■■■□ 25.1
HOXB3-212ENST00000498678 CRXO43186 299 aaPredicted RBP19.19■□□□□ 0.66
HOXB3-212ENST00000498678 HINT1P49773 126 aaPredicted RBP19.19■□□□□ 0.66
HOXB3-212ENST00000498678 SPANXN1Q5VSR9 72 aa19.19■□□□□ 0.66
HOXB3-212ENST00000498678 OR11H12B2RN74 326 aa19.19■□□□□ 0.66
HOXB3-212ENST00000498678 JMJD1CQ15652 2540 aa19.18■□□□□ 0.66
HOXB3-212ENST00000498678 SPRY2O43597 315 aa19.17■□□□□ 0.66
HOXB3-212ENST00000498678 MRPL51Q4U2R6 128 aaKnown RBP19.17■□□□□ 0.66
HOXB3-212ENST00000498678 CD7P09564 240 aa19.16■□□□□ 0.66
HOXB3-212ENST00000498678 RBMY1A1P0DJD3 496 aaKnown RBP19.16■□□□□ 0.66
HOXB3-212ENST00000498678 RBMY1CP0DJD4 496 aa19.16■□□□□ 0.66
HOXB3-212ENST00000498678 RBMY1FQ15415 496 aaKnown RBP19.16■□□□□ 0.66
HOXB3-212ENST00000498678 BEAN1Q3B7T3 259 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms