RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 PP6455Q8WZ26 134 aa2.29□□□□□ -2.04
SOX2-OT-216ENST00000497122 SNRNP25Q9BV90 132 aaKnown RBP2.29□□□□□ -2.04
SOX2-OT-216ENST00000497122 AGPAT4-IT1Q9H0P7 198 aa2.29□□□□□ -2.04
SOX2-OT-216ENST00000497122 IGLV3-1P01715 115 aa2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 GYPBP06028 91 aa2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 PIPP12273 146 aaPredicted RBP2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 SPATA45Q537H7 98 aa2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 S100A7L2Q5SY68 101 aa2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 RPL7L1Q6DKI1 246 aaKnown RBP2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 PPDPFLQ8WWR9 84 aa2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 ATG5Q9H1Y0 275 aa2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 NDUFA12Q9UI09 145 aa2.28□□□□□ -2.04
SOX2-OT-216ENST00000497122 NALCNQ8IZF0 1738 aa2.28□□□□□ -2.05
SOX2-OT-216ENST00000497122 LRP5O75197 1615 aa2.28□□□□□ -2.05
SOX2-OT-216ENST00000497122 SDK1Q7Z5N4 2213 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 ERBINQ96RT1 1412 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 TRAV2A0A0B4J234 112 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 A6NIN4 97 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 CORTO00230 105 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 SPANXN1Q5VSR9 72 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 C12orf57Q99622 126 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 CYSTM1Q9H1C7 97 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 RERGLQ9H628 205 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 NAA60Q9H7X0 242 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 CASZ1Q86V15 1759 aa2.27□□□□□ -2.05
SOX2-OT-216ENST00000497122 IGKV2-29A2NJV5 120 aaPredicted RBP2.26□□□□□ -2.05
SOX2-OT-216ENST00000497122 NUPR2A6NF83 97 aa2.26□□□□□ -2.05
SOX2-OT-216ENST00000497122 NDUFB6O95139 128 aa2.26□□□□□ -2.05
SOX2-OT-216ENST00000497122 WDR97A6NE52 1622 aa2.26□□□□□ -2.05
SOX2-OT-216ENST00000497122 MBD5Q9P267 1494 aa2.26□□□□□ -2.05
SOX2-OT-216ENST00000497122 PDE6GP18545 87 aa2.25□□□□□ -2.05
SOX2-OT-216ENST00000497122 MRPL57Q9BQC6 102 aaKnown RBP2.25□□□□□ -2.05
SOX2-OT-216ENST00000497122 TCEAL7Q9BRU2 100 aa2.25□□□□□ -2.05
SOX2-OT-216ENST00000497122 MCM3APO60318 1980 aa2.25□□□□□ -2.05
SOX2-OT-216ENST00000497122 C20orf202A1L168 122 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 J3QKU1 62 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 IGHV3-30P01768 117 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 IGHV3-30-5P0DP03 117 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 FXYD4P59646 89 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 Q56UQ5 140 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 TRIOBPQ9H2D6 2365 aa2.24□□□□□ -2.05
SOX2-OT-216ENST00000497122 ADGRB1O14514 1584 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 TRBV10-1A0A0K0K1A3 114 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 MCRIP1C9JLW8 97 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 CCKP06307 115 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 TPPP2P59282 170 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 RPL37AP61513 92 aaKnown RBP2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 UBE2G1P62253 170 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 TMEM141Q96I45 108 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 SERP1Q9Y6X1 66 aa2.23□□□□□ -2.05
SOX2-OT-216ENST00000497122 GNG4P50150 75 aa2.22□□□□□ -2.05
SOX2-OT-216ENST00000497122 PPP3R1P63098 170 aa2.22□□□□□ -2.05
SOX2-OT-216ENST00000497122 MRPL54Q6P161 138 aaKnown RBP2.22□□□□□ -2.05
SOX2-OT-216ENST00000497122 C10orf105Q8TEF2 133 aa2.22□□□□□ -2.05
SOX2-OT-216ENST00000497122 LINC00526Q96FQ7 95 aa2.22□□□□□ -2.05
SOX2-OT-216ENST00000497122 MRPL35Q9NZE8 188 aaKnown RBP2.22□□□□□ -2.05
SOX2-OT-216ENST00000497122 EIF4G3O43432 1585 aaKnown RBP2.22□□□□□ -2.05
SOX2-OT-216ENST00000497122 CXorf51AA0A1B0GTR3 108 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 TCRBV3S1A0A5B6 114 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 APOC4-APOC2K7ER74 178 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 APOC2P02655 101 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 BTG2P78543 158 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 SLC48A1Q6P1K1 146 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 DEFB119Q8N690 84 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 LSM10Q969L4 123 aaKnown RBP2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 IFI27L1Q96BM0 104 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 AKAP11Q9UKA4 1901 aa2.21□□□□□ -2.06
SOX2-OT-216ENST00000497122 CATR1Q13166 79 aa2.2□□□□□ -2.06
SOX2-OT-216ENST00000497122 SPTSSBQ8NFR3 76 aa2.2□□□□□ -2.06
SOX2-OT-216ENST00000497122 CFTRP13569 1480 aa2.2□□□□□ -2.06
SOX2-OT-216ENST00000497122 ADGRB2O60241 1585 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 MED13Q9UHV7 2174 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 COL4A1P02462 1669 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 CITO14578 2027 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 LOC101927531A0A1B0GV80 90 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 HIGD1CA8MV81 97 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 SNRNP200O75643 2136 aaKnown RBP2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 C9orf116Q5BN46 136 aaPredicted RBP2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 ZGRF1Q86YA3 2104 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 TSKUQ8WUA8 353 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 RPRMQ9NS64 109 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 PLXNA2O75051 1894 aa2.19□□□□□ -2.06
SOX2-OT-216ENST00000497122 RBM3P98179 157 aaKnown RBP2.18□□□□□ -2.06
SOX2-OT-216ENST00000497122 Q6AWC8 147 aa2.18□□□□□ -2.06
SOX2-OT-216ENST00000497122 C14orf144Q96I85 54 aa2.18□□□□□ -2.06
SOX2-OT-216ENST00000497122 C22orf24Q9Y442 160 aa2.18□□□□□ -2.06
SOX2-OT-216ENST00000497122 ATG2AQ2TAZ0 1938 aa2.18□□□□□ -2.06
SOX2-OT-216ENST00000497122 TET1Q8NFU7 2136 aa2.17□□□□□ -2.06
SOX2-OT-216ENST00000497122 C9orf153Q5TBE3 101 aa2.17□□□□□ -2.06
SOX2-OT-216ENST00000497122 GTF2H5Q6ZYL4 71 aa2.17□□□□□ -2.06
SOX2-OT-216ENST00000497122 SBSPONQ8IVN8 264 aa2.17□□□□□ -2.06
SOX2-OT-216ENST00000497122 KTN1Q86UP2 1357 aaKnown RBP2.17□□□□□ -2.06
SOX2-OT-216ENST00000497122 RIMS1Q86UR5 1692 aaKnown RBP2.17□□□□□ -2.06
SOX2-OT-216ENST00000497122 FAM135AQ9P2D6 1515 aa2.17□□□□□ -2.06
SOX2-OT-216ENST00000497122 TRAV12-3A0A0B4J271 114 aa2.16□□□□□ -2.06
SOX2-OT-216ENST00000497122 PIGBOS1A0A0B4J2F0 54 aa2.16□□□□□ -2.06
SOX2-OT-216ENST00000497122 NCR3O14931 201 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms