RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ZNF705AQ6ZN79 300 aaPredicted RBP5.22□□□□□ -1.57
USP39-219ENST00000496047 MRPL52Q86TS9 123 aaKnown RBP5.22□□□□□ -1.57
USP39-219ENST00000496047 APRG1Q8IVJ8 170 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 KIR2DL5AQ8N109 375 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 OR11H1Q8NG94 326 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 OR1N2Q8NGR9 330 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 MRAP2Q96G30 205 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 DPH3P1Q9H4G8 78 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 U3KQK5 164 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 AGRNO00468 2067 aa5.22□□□□□ -1.57
USP39-219ENST00000496047 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 IGHV4-4A0A075B6R2 117 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 TRAV25A0A0B4J276 109 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 IGKV3D-20A0A0C4DH25 116 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 A0A0J9YX75 114 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 LINC00587B1AMM8 73 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 G0S2P27469 103 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 CDKN1BP46527 198 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 CMC4P56277 68 aaPredicted RBP5.21□□□□□ -1.58
USP39-219ENST00000496047 LBHQ53QV2 105 aaPredicted RBP5.21□□□□□ -1.58
USP39-219ENST00000496047 C10orf99Q6UWK7 81 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 Q6ZSV7 163 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 Q71RC1 249 aaPredicted RBP5.21□□□□□ -1.58
USP39-219ENST00000496047 ZNF664Q8N3J9 261 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 ZFAND2AQ8N6M9 145 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 OR9G4Q8NGQ1 327 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 FAM19A4Q96LR4 140 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 NDUFAF3Q9BU61 184 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 PAM16Q9Y3D7 125 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 TIMM8BQ9Y5J9 83 aaPredicted RBP5.21□□□□□ -1.58
USP39-219ENST00000496047 TSSC4Q9Y5U2 329 aaPredicted RBP5.21□□□□□ -1.58
USP39-219ENST00000496047 JMJD1CQ15652 2540 aa5.21□□□□□ -1.58
USP39-219ENST00000496047 LOC389332A0A1B0GUA5 103 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 LINC01549A6NIU2 74 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 KLLNB2CW77 178 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 K7EMI3 77 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 M0R381 172 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 SLURP1P55000 103 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 KIR3DS1Q14943 382 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 ANXA2RQ3ZCQ2 193 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 SPATA45Q537H7 98 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 RAX2Q96IS3 184 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 SPAG8Q99932 426 aaPredicted RBP5.2□□□□□ -1.58
USP39-219ENST00000496047 C20orf144Q9BQM9 153 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 C16orf95Q9H693 158 aa5.2□□□□□ -1.58
USP39-219ENST00000496047 TACC2O95359 2948 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 MUC21A0A0G2JKD1 596 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 MUC21A0A140T8X8 626 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 F6UB75 175 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 SYS1-DBNDD2H3BUS1 97 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 TNFRSF6BO95407 300 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 NPYP01303 97 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 MGPP08493 103 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 CD7P09564 240 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 IFI27P40305 119 aaPredicted RBP5.19□□□□□ -1.58
USP39-219ENST00000496047 MUC21Q5SSG8 566 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 OR2K2Q8NGT1 345 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 SIGLEC8Q9NYZ4 499 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 UQCR10Q9UDW1 63 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 MUC4Q99102 2169 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 COL6A5A8TX70 2615 aa5.19□□□□□ -1.58
USP39-219ENST00000496047 IGHV1OR15-1A0A075B7D0 117 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 TRAV9-2A0A087WT02 112 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 CRXO43186 299 aaPredicted RBP5.18□□□□□ -1.58
USP39-219ENST00000496047 ATP5LO75964 103 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 NDUFA7O95182 113 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 NCR2O95944 276 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 HLA-DRB4P13762 266 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 HNRNPA3P51991 378 aaKnown RBP5.18□□□□□ -1.58
USP39-219ENST00000496047 HILS1P60008 231 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 DEFB136Q30KP8 78 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 ORMDL2Q53FV1 153 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 PRR9Q5T870 116 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 Q8N8P6 123 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 RNF185Q96GF1 192 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 URB1-AS1Q96HZ7 61 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 MIEN1Q9BRT3 115 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 C11orf21Q9P2W6 132 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 HLA-DRB4X5D2U9 266 aa5.18□□□□□ -1.58
USP39-219ENST00000496047 TRAV12-3A0A0B4J271 114 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 H0Y8G0 127 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 SMKR1H3BMG3 65 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 M0R143 59 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 CCL24O00175 119 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 TCAPO15273 167 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 INSP01308 110 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 IGKV3-20P01619 116 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 EVI2AP22794 236 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 DEFB131AP59861 70 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 NUTF2P61970 127 aaKnown RBP5.17□□□□□ -1.58
USP39-219ENST00000496047 ZNF415Q09FC8 603 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 LAGE3Q14657 143 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 LGALS9BQ3B8N2 356 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 TDRG1Q3Y452 100 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 LGALS9CQ6DKI2 356 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 PMCHL2Q9BQD1 86 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 C20orf78Q9BR46 151 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 ST20Q9HBF5 79 aa5.17□□□□□ -1.58
USP39-219ENST00000496047 CSMD2Q7Z408 3487 aa5.16□□□□□ -1.58
USP39-219ENST00000496047 A0A1W2PRX2 142 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms