RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MAPKAPK5-AS1Q8N8E1 139 aa8.64□□□□□ -1.03
PTPRF-214ENST00000496043 HIST1H2BAQ96A08 127 aa8.64□□□□□ -1.03
PTPRF-214ENST00000496043 ARL2-SNX15V9GYD0 113 aa8.64□□□□□ -1.03
PTPRF-214ENST00000496043 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
PTPRF-214ENST00000496043 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 IGKV3D-20A0A0C4DH25 116 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 IGHV3-38A0A0C4DH36 116 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 A0A1B0GVG6 124 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 FAM74A7A6NL05 159 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 ARPC5O15511 151 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 CRYGDP07320 174 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 ZNF506Q5JVG8 444 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 STOML3Q8TAV4 291 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 CYTL1Q9NRR1 136 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 ZFP30Q9Y2G7 519 aa8.63□□□□□ -1.03
PTPRF-214ENST00000496043 A8MWV9 139 aa8.62□□□□□ -1.03
PTPRF-214ENST00000496043 G3V3Q6 166 aa8.62□□□□□ -1.03
PTPRF-214ENST00000496043 MGST1P10620 155 aaKnown RBP8.62□□□□□ -1.03
PTPRF-214ENST00000496043 ASIPP42127 132 aa8.62□□□□□ -1.03
PTPRF-214ENST00000496043 LGALSLQ3ZCW2 172 aaPredicted RBP8.62□□□□□ -1.03
PTPRF-214ENST00000496043 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
PTPRF-214ENST00000496043 A0A087WTM6 91 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 MAP1LC3B2A6NCE7 125 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 B4DEV8 164 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 OR10J3Q5JRS4 329 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 ZFP2Q6ZN57 461 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 Q8N1X5 172 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 MAP1LC3BQ9GZQ8 125 aa8.61□□□□□ -1.03
PTPRF-214ENST00000496043 hCG_2014768A0A024R1R8 64 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 FHITP49789 147 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 CRIP1P50238 77 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 UBE2G1P62253 170 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 LELP1Q5T871 98 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 Q86TA4 180 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 FMC1Q96HJ9 113 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 PARLQ9H300 379 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 SCRT2Q9NQ03 307 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 HSPG2P98160 4391 aa8.6□□□□□ -1.03
PTPRF-214ENST00000496043 IBA57-AS1B1ANH7 110 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 KRBOX1C9JBD0 128 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 SMLR1H3BR10 107 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 DNLZQ5SXM8 178 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 FAM162BQ5T6X4 162 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 Q6ZSN1 163 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 KCNRGQ8N5I3 272 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 SYT8Q8NBV8 401 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 ZC2HC1AQ96GY0 325 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
PTPRF-214ENST00000496043 TRBV6-1A0A0K0K1D8 114 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 PSCAO43653 123 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 SH2D1AO60880 128 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 ARMS2P0C7Q2 107 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 SEC11BP0C7V7 166 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPRF-214ENST00000496043 DMRTA1Q5VZB9 504 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 MBD3L1Q8WWY6 194 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 JPT2Q9H910 190 aa8.58□□□□□ -1.04
PTPRF-214ENST00000496043 A0A0D9SG52 128 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 GRIFINA4D1Z8 144 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 GAGE12JA6NER3 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 HMSDA8MTL9 139 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 UMAD1C9J7I0 102 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 M0R036 132 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 PAGE4O60829 102 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 IGHV3-30P01768 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 IGHV3-33P01772 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 S100A9P06702 114 aaKnown RBP8.57□□□□□ -1.04
PTPRF-214ENST00000496043 IGHV3-30-3P0DP02 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 IGHV3-30-5P0DP03 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 GAGE1Q13065 139 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 GAGE4Q13068 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 GAGE5Q13069 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 ZNF345Q14585 488 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 OR11H4Q8NGC9 324 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 SFT2D1Q8WV19 159 aa8.57□□□□□ -1.04
PTPRF-214ENST00000496043 H3BVH4 76 aa8.56□□□□□ -1.04
PTPRF-214ENST00000496043 LTAP01374 205 aa8.56□□□□□ -1.04
PTPRF-214ENST00000496043 TPT1P13693 172 aaKnown RBP8.56□□□□□ -1.04
PTPRF-214ENST00000496043 AKR1C3P42330 323 aa8.56□□□□□ -1.04
PTPRF-214ENST00000496043 UFSP1Q6NVU6 142 aa8.56□□□□□ -1.04
PTPRF-214ENST00000496043 FAM213BQ8TBF2 198 aa8.56□□□□□ -1.04
PTPRF-214ENST00000496043 SAMD10Q9BYL1 202 aa8.56□□□□□ -1.04
PTPRF-214ENST00000496043 PHLDA3Q9Y5J5 127 aa8.56□□□□□ -1.04
PTPRF-214ENST00000496043 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
PTPRF-214ENST00000496043 A0A087WWC5 75 aa8.55□□□□□ -1.04
PTPRF-214ENST00000496043 TMSB15BA0A087X1C1 80 aa8.55□□□□□ -1.04
PTPRF-214ENST00000496043 KANTRA0A1W2PQU2 76 aa8.55□□□□□ -1.04
PTPRF-214ENST00000496043 RHODO00212 210 aa8.55□□□□□ -1.04
PTPRF-214ENST00000496043 EIF5AP63241 154 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms