RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 NEGR1Q7Z3B1 354 aa11.21□□□□□ -0.61
CHTOP-206ENST00000495554 RHPN1-AS1Q9BWJ2 59 aa11.21□□□□□ -0.61
CHTOP-206ENST00000495554 GAS8-AS1O95177 125 aa11.21□□□□□ -0.62
CHTOP-206ENST00000495554 SMIM17P0DL12 118 aa11.21□□□□□ -0.62
CHTOP-206ENST00000495554 FXYD7P58549 80 aa11.21□□□□□ -0.62
CHTOP-206ENST00000495554 PRR9Q5T870 116 aa11.21□□□□□ -0.62
CHTOP-206ENST00000495554 Q6ZQT7 251 aa11.21□□□□□ -0.62
CHTOP-206ENST00000495554 NAV2Q8IVL1 2488 aa11.2□□□□□ -0.62
CHTOP-206ENST00000495554 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
CHTOP-206ENST00000495554 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
CHTOP-206ENST00000495554 IFI27L1Q96BM0 104 aa11.2□□□□□ -0.62
CHTOP-206ENST00000495554 J3QLI3 93 aa11.2□□□□□ -0.62
CHTOP-206ENST00000495554 TRAV21A0A0B4J279 112 aa11.19□□□□□ -0.62
CHTOP-206ENST00000495554 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
CHTOP-206ENST00000495554 CR1P17927 2039 aa11.19□□□□□ -0.62
CHTOP-206ENST00000495554 K7EMT4 169 aa11.19□□□□□ -0.62
CHTOP-206ENST00000495554 HSD52Q0P140 79 aa11.19□□□□□ -0.62
CHTOP-206ENST00000495554 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
CHTOP-206ENST00000495554 MXRA5Q9NR99 2828 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 TAX1BP3O14907 124 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 OR2K2Q8NGT1 345 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 H3BVH4 76 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 FSHBP01225 129 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 COX8AP10176 69 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 GATA1P15976 413 aaPredicted RBP11.18□□□□□ -0.62
CHTOP-206ENST00000495554 PSMB8P28062 276 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 FCER1GP30273 86 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 DEFB113Q30KQ7 82 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
CHTOP-206ENST00000495554 APCP25054 2843 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 LEPP41159 167 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 Q8N8P6 123 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 RNF183Q96D59 192 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 TEX15Q9BXT5 2789 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 NBPF19A0A087WUL8 3843 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
CHTOP-206ENST00000495554 ERG28Q9UKR5 140 aa11.17□□□□□ -0.62
CHTOP-206ENST00000495554 IGKV3-7A0A075B6H7 116 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 CD300EQ496F6 205 aaPredicted RBP11.16□□□□□ -0.62
CHTOP-206ENST00000495554 C12orf54Q6X4T0 127 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 DUX5Q96PT3 197 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 BEX4Q9NWD9 120 aaPredicted RBP11.16□□□□□ -0.62
CHTOP-206ENST00000495554 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 GAGE12HA6NDE8 117 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 B5MCH6 92 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 DEFB1P60022 68 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 APRG1Q8IVJ8 170 aa11.16□□□□□ -0.62
CHTOP-206ENST00000495554 ZNF469Q96JG9 3925 aaPredicted RBP11.15□□□□□ -0.62
CHTOP-206ENST00000495554 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
CHTOP-206ENST00000495554 F6UB75 175 aa11.15□□□□□ -0.62
CHTOP-206ENST00000495554 NUDT3O95989 172 aa11.15□□□□□ -0.62
CHTOP-206ENST00000495554 NRACQ8N912 160 aa11.15□□□□□ -0.62
CHTOP-206ENST00000495554 S100A4P26447 101 aaKnown RBP11.15□□□□□ -0.63
CHTOP-206ENST00000495554 ASIPP42127 132 aa11.15□□□□□ -0.63
CHTOP-206ENST00000495554 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.63
CHTOP-206ENST00000495554 LRRC75A-AS1Q8N1F1 130 aa11.15□□□□□ -0.63
CHTOP-206ENST00000495554 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
CHTOP-206ENST00000495554 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
CHTOP-206ENST00000495554 C18orf15Q96N68 181 aa11.14□□□□□ -0.63
CHTOP-206ENST00000495554 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
CHTOP-206ENST00000495554 MED14OSP0DP75 135 aa11.14□□□□□ -0.63
CHTOP-206ENST00000495554 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
CHTOP-206ENST00000495554 PRRC2AP48634 2157 aaKnown RBP11.13□□□□□ -0.63
CHTOP-206ENST00000495554 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 GTF2H5Q6ZYL4 71 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 DOPEY2Q9Y3R5 2298 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 UFSP1Q6NVU6 142 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 DCANP1Q8TF63 244 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
CHTOP-206ENST00000495554 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 CHD6Q8TD26 2715 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 M0R381 172 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 SRD5A1P18405 259 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 Q6YL49 198 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 LAGE3Q14657 143 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 ZNF418Q8TF45 676 aaPredicted RBP11.12□□□□□ -0.63
CHTOP-206ENST00000495554 Q96MF0 132 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 TENM4Q6N022 2769 aa11.12□□□□□ -0.63
CHTOP-206ENST00000495554 FGF6P10767 208 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 EDN2P20800 178 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 PSMG4Q5JS54 123 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 CD5LO43866 347 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 PRSS1P07477 247 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 KIR3DS1Q14943 382 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 SELENOKQ9Y6D0 94 aa11.11□□□□□ -0.63
CHTOP-206ENST00000495554 KLLNB2CW77 178 aa11.1□□□□□ -0.63
CHTOP-206ENST00000495554 ATP5LO75964 103 aa11.1□□□□□ -0.63
CHTOP-206ENST00000495554 A0A087WX48 190 aa11.09□□□□□ -0.63
CHTOP-206ENST00000495554 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
CHTOP-206ENST00000495554 GNRH2O43555 120 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms