RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ASIPP42127 132 aa22.69■■□□□ 1.22
CBX4-203ENST00000494546 LINC00315P59091 139 aa22.69■■□□□ 1.22
CBX4-203ENST00000494546 NHLRC2Q8NBF2 726 aa22.69■■□□□ 1.22
CBX4-203ENST00000494546 BTF3P20290 206 aaKnown RBP22.68■■□□□ 1.22
CBX4-203ENST00000494546 CRIP1P50238 77 aa22.68■■□□□ 1.22
CBX4-203ENST00000494546 PTH2Q96A98 100 aa22.68■■□□□ 1.22
CBX4-203ENST00000494546 HERC2O95714 4834 aa22.68■■□□□ 1.22
CBX4-203ENST00000494546 B4DEV8 164 aa22.67■■□□□ 1.22
CBX4-203ENST00000494546 CIDEAO60543 219 aa22.67■■□□□ 1.22
CBX4-203ENST00000494546 AKR1C3P42330 323 aa22.67■■□□□ 1.22
CBX4-203ENST00000494546 SLC25A29Q8N8R3 303 aa22.67■■□□□ 1.22
CBX4-203ENST00000494546 KIAA1109Q2LD37 5005 aa22.67■■□□□ 1.22
CBX4-203ENST00000494546 M0R036 132 aa22.66■■□□□ 1.22
CBX4-203ENST00000494546 SH2D1AO60880 128 aa22.66■■□□□ 1.22
CBX4-203ENST00000494546 TPT1P13693 172 aaKnown RBP22.66■■□□□ 1.22
CBX4-203ENST00000494546 WFDC10BQ8IUB3 73 aa22.66■■□□□ 1.22
CBX4-203ENST00000494546 DNAH11Q96DT5 4516 aa22.66■■□□□ 1.22
CBX4-203ENST00000494546 FAM162BQ5T6X4 162 aa22.65■■□□□ 1.22
CBX4-203ENST00000494546 COX8CQ7Z4L0 72 aa22.65■■□□□ 1.22
CBX4-203ENST00000494546 SH2D6Q7Z4S9 175 aa22.65■■□□□ 1.22
CBX4-203ENST00000494546 PRADC1Q9BSG0 188 aa22.65■■□□□ 1.22
CBX4-203ENST00000494546 LY96Q9Y6Y9 160 aa22.65■■□□□ 1.22
CBX4-203ENST00000494546 DYNC1H1Q14204 4646 aaKnown RBP22.64■■□□□ 1.22
CBX4-203ENST00000494546 H2AFB1P0C5Y9 115 aa22.64■■□□□ 1.21
CBX4-203ENST00000494546 TRBV6-1A0A0K0K1D8 114 aa22.63■■□□□ 1.21
CBX4-203ENST00000494546 C16orf90A8MZG2 172 aa22.63■■□□□ 1.21
CBX4-203ENST00000494546 LTAP01374 205 aa22.63■■□□□ 1.21
CBX4-203ENST00000494546 RHOHQ15669 191 aa22.63■■□□□ 1.21
CBX4-203ENST00000494546 LGALSLQ3ZCW2 172 aaPredicted RBP22.63■■□□□ 1.21
CBX4-203ENST00000494546 TRBV6-4A0A1B0GX49 114 aa22.62■■□□□ 1.21
CBX4-203ENST00000494546 KRBOX1C9JBD0 128 aa22.62■■□□□ 1.21
CBX4-203ENST00000494546 H3BVH4 76 aa22.62■■□□□ 1.21
CBX4-203ENST00000494546 IL36BQ9NZH7 164 aa22.62■■□□□ 1.21
CBX4-203ENST00000494546 TRAV9-2A0A087WT02 112 aa22.61■■□□□ 1.21
CBX4-203ENST00000494546 GRIFINA4D1Z8 144 aa22.6■■□□□ 1.21
CBX4-203ENST00000494546 TNFRSF18Q9Y5U5 241 aa22.6■■□□□ 1.21
CBX4-203ENST00000494546 SCO2A0A1W2PP80 73 aa22.59■■□□□ 1.21
CBX4-203ENST00000494546 A8MWV9 139 aa22.59■■□□□ 1.21
CBX4-203ENST00000494546 MGST1P10620 155 aaKnown RBP22.59■■□□□ 1.21
CBX4-203ENST00000494546 ZNF674Q2M3X9 581 aa22.59■■□□□ 1.21
CBX4-203ENST00000494546 PARLQ9H300 379 aa22.59■■□□□ 1.21
CBX4-203ENST00000494546 TMSB15BA0A087X1C1 80 aa22.58■■□□□ 1.21
CBX4-203ENST00000494546 ARMS2P0C7Q2 107 aa22.58■■□□□ 1.21
CBX4-203ENST00000494546 EVI2AP22794 236 aa22.58■■□□□ 1.21
CBX4-203ENST00000494546 PIK3CD-AS1Q5SR53 167 aa22.58■■□□□ 1.21
CBX4-203ENST00000494546 Q6ZRN7 208 aaPredicted RBP22.58■■□□□ 1.21
CBX4-203ENST00000494546 SPATA12Q7Z6I5 190 aa22.58■■□□□ 1.21
CBX4-203ENST00000494546 DNLZQ5SXM8 178 aa22.57■■□□□ 1.2
CBX4-203ENST00000494546 JPT2Q9H910 190 aa22.57■■□□□ 1.2
CBX4-203ENST00000494546 S100A9P06702 114 aaKnown RBP22.56■■□□□ 1.2
CBX4-203ENST00000494546 DNAH10OSP0CZ25 163 aa22.56■■□□□ 1.2
CBX4-203ENST00000494546 TIRAPP58753 221 aa22.56■■□□□ 1.2
CBX4-203ENST00000494546 LINC01559Q495D7 138 aa22.55■■□□□ 1.2
CBX4-203ENST00000494546 DMRTA1Q5VZB9 504 aa22.55■■□□□ 1.2
CBX4-203ENST00000494546 ZFP2Q6ZN57 461 aa22.55■■□□□ 1.2
CBX4-203ENST00000494546 Q6ZSN1 163 aa22.55■■□□□ 1.2
CBX4-203ENST00000494546 TCTE3Q8IZS6 198 aa22.55■■□□□ 1.2
CBX4-203ENST00000494546 SYT8Q8NBV8 401 aa22.55■■□□□ 1.2
CBX4-203ENST00000494546 NFE4Q86UQ8 179 aa22.53■■□□□ 1.2
CBX4-203ENST00000494546 SAMD10Q9BYL1 202 aa22.53■■□□□ 1.2
CBX4-203ENST00000494546 PHLDA3Q9Y5J5 127 aa22.53■■□□□ 1.2
CBX4-203ENST00000494546 K7EP13 123 aa22.52■■□□□ 1.2
CBX4-203ENST00000494546 CCL20P78556 96 aa22.52■■□□□ 1.2
CBX4-203ENST00000494546 EIF5AL1Q6IS14 154 aaKnown RBP22.52■■□□□ 1.2
CBX4-203ENST00000494546 CRYGDP07320 174 aa22.51■■□□□ 1.19
CBX4-203ENST00000494546 BAGE2Q86Y30 109 aa22.51■■□□□ 1.19
CBX4-203ENST00000494546 MSRB1Q9NZV6 116 aa22.51■■□□□ 1.19
CBX4-203ENST00000494546 GNG13Q9P2W3 67 aa22.51■■□□□ 1.19
CBX4-203ENST00000494546 TRAV8-6A0A0B4J262 113 aa22.5■■□□□ 1.19
CBX4-203ENST00000494546 RAB5CP51148 216 aa22.5■■□□□ 1.19
CBX4-203ENST00000494546 KRTAP10-2P60368 255 aa22.5■■□□□ 1.19
CBX4-203ENST00000494546 OR10J3Q5JRS4 329 aa22.5■■□□□ 1.19
CBX4-203ENST00000494546 ATP6V0E2Q8NHE4 81 aa22.5■■□□□ 1.19
CBX4-203ENST00000494546 IGHV3-38A0A0C4DH36 116 aa22.49■■□□□ 1.19
CBX4-203ENST00000494546 UFSP1Q6NVU6 142 aa22.49■■□□□ 1.19
CBX4-203ENST00000494546 SCRT2Q9NQ03 307 aa22.49■■□□□ 1.19
CBX4-203ENST00000494546 MANBALQ9NQG1 85 aa22.49■■□□□ 1.19
CBX4-203ENST00000494546 GAGE12JA6NER3 117 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 M0R381 172 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 GAGE1Q13065 139 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 GAGE4Q13068 117 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 GAGE5Q13069 117 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 GAGE13Q4V321 117 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 FAM74A4Q5TZK3 123 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 Q6ZNX1 250 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 C10orf126Q8N4M7 172 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 GTSF1LQ9H1H1 148 aa22.48■■□□□ 1.19
CBX4-203ENST00000494546 MLST8Q9BVC4 326 aa22.47■■□□□ 1.19
CBX4-203ENST00000494546 TRAV1-1A0A0B4J248 108 aa22.46■■□□□ 1.19
CBX4-203ENST00000494546 RHODO00212 210 aa22.46■■□□□ 1.19
CBX4-203ENST00000494546 C1QBP02746 253 aa22.46■■□□□ 1.19
CBX4-203ENST00000494546 TEX46H3BTG2 121 aa22.45■■□□□ 1.18
CBX4-203ENST00000494546 SULT1A2P50226 295 aa22.45■■□□□ 1.18
CBX4-203ENST00000494546 RPL19P84098 196 aaKnown RBP22.45■■□□□ 1.18
CBX4-203ENST00000494546 LELP1Q5T871 98 aa22.45■■□□□ 1.18
CBX4-203ENST00000494546 PRR27Q6MZM9 219 aa22.45■■□□□ 1.18
CBX4-203ENST00000494546 ZFP82Q8N141 532 aa22.45■■□□□ 1.18
CBX4-203ENST00000494546 C14orf178Q8N769 122 aaPredicted RBP22.45■■□□□ 1.18
CBX4-203ENST00000494546 A0A087WWL8 130 aa22.44■■□□□ 1.18
CBX4-203ENST00000494546 RPL35P42766 123 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms