RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NXPH4O95158 308 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 HLA-DMBP28068 263 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 RIPPLY3P57055 190 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 RNF182Q8N6D2 247 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 POM121L12Q8N7R1 296 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 RNASE8Q8TDE3 154 aaKnown RBP8.76□□□□□ -1.01
RFC4-214ENST00000494047 TOMM6Q96B49 74 aa8.76□□□□□ -1.01
RFC4-214ENST00000494047 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
RFC4-214ENST00000494047 TRAV8-6A0A0B4J262 113 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 OR11H12B2RN74 326 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 HERVK_113P61574 105 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 CLEC2AQ6UVW9 174 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 ZNF575Q86XF7 245 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 OR11H1Q8NG94 326 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 OR11H2Q8NH07 326 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 Q96MF0 132 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 VPS25Q9BRG1 176 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 DKK2Q9UBU2 259 aa8.75□□□□□ -1.01
RFC4-214ENST00000494047 G3V318 75 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 SOCS3O14543 225 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 CEND1Q8N111 149 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 FAM19A4Q96LR4 140 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 C18orf15Q96N68 181 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 MCRIP2Q9BUT9 160 aaKnown RBP8.74□□□□□ -1.01
RFC4-214ENST00000494047 MSRB1Q9NZV6 116 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 SPCS1Q9Y6A9 102 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 VPS13CQ709C8 3753 aa8.74□□□□□ -1.01
RFC4-214ENST00000494047 TRBV25-1A0A075B6N4 114 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 IGHV4OR15-8A0A075B7B6 117 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 A0A087WW49 117 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 H3BUT2 72 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 H3BVH4 76 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 PRR31Q5SQ13 230 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 SAMD5Q5TGI4 173 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 ZFAND2AQ8N6M9 145 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 TMEM141Q96I45 108 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 CSPG4Q6UVK1 2322 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 GCSHP23434 173 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 PPIFP30405 207 aaKnown RBP8.73□□□□□ -1.01
RFC4-214ENST00000494047 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 SYT8Q8NBV8 401 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 C11orf21Q9P2W6 132 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 CYSLTR1Q9Y271 337 aa8.73□□□□□ -1.01
RFC4-214ENST00000494047 CHTOPQ9Y3Y2 248 aaKnown RBP8.73□□□□□ -1.01
RFC4-214ENST00000494047 SETD2Q9BYW2 2564 aaPredicted RBP8.72□□□□□ -1.01
RFC4-214ENST00000494047 IGHV3-35A0A0C4DH35 117 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 A6NDX4 124 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 F8W1H4 67 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 IGHV4-39P01824 125 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 Q6ZVH6 145 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 GPHB5Q86YW7 130 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 KIR2DL4Q99706 377 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 TMEM160Q9NX00 188 aa8.72□□□□□ -1.01
RFC4-214ENST00000494047 MRPL35Q9NZE8 188 aaKnown RBP8.72□□□□□ -1.01
RFC4-214ENST00000494047 TLN2Q9Y4G6 2542 aa8.71□□□□□ -1.01
RFC4-214ENST00000494047 HIVEP2P31629 2446 aa8.71□□□□□ -1.01
RFC4-214ENST00000494047 TRAV40A0A0B4J280 105 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 KLLNB2CW77 178 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 E9PLD3 99 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 IGLV1-40P01703 118 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 TM4SF20Q53R12 229 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 FAM159AQ6UWV7 190 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 NEXN-AS1Q8NBZ9 246 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 C10orf105Q8TEF2 133 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
RFC4-214ENST00000494047 ZFHX3Q15911 3703 aa8.7□□□□□ -1.02
RFC4-214ENST00000494047 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
RFC4-214ENST00000494047 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
RFC4-214ENST00000494047 A0A1B0GWB2 263 aa8.7□□□□□ -1.02
RFC4-214ENST00000494047 J3QLI3 93 aa8.7□□□□□ -1.02
RFC4-214ENST00000494047 SNRPD3P62318 126 aaKnown RBP8.7□□□□□ -1.02
RFC4-214ENST00000494047 SCGB2A2Q13296 93 aa8.7□□□□□ -1.02
RFC4-214ENST00000494047 NEGR1Q7Z3B1 354 aa8.7□□□□□ -1.02
RFC4-214ENST00000494047 IGHV3OR16-8A0A075B7F1 116 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 IGHV3-66A0A0C4DH42 116 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 B4DSR2 109 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 VCYO14598 125 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 DUSP14O95147 198 aaKnown RBP8.69□□□□□ -1.02
RFC4-214ENST00000494047 MSMBP08118 114 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 C2orf66Q6UXQ4 117 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 RASL10AQ92737 203 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 HIST1H4GQ99525 98 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 RHPN1-AS1Q9BWJ2 59 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
RFC4-214ENST00000494047 ARHGAP32A7KAX9 2087 aa8.68□□□□□ -1.02
RFC4-214ENST00000494047 PF4V1P10720 104 aa8.68□□□□□ -1.02
RFC4-214ENST00000494047 RHOHQ15669 191 aa8.68□□□□□ -1.02
RFC4-214ENST00000494047 RNF151Q2KHN1 245 aa8.68□□□□□ -1.02
RFC4-214ENST00000494047 ANXA2RQ3ZCQ2 193 aa8.68□□□□□ -1.02
RFC4-214ENST00000494047 GTSCR1Q86UQ5 136 aa8.68□□□□□ -1.02
RFC4-214ENST00000494047 RNF152Q8N8N0 203 aa8.68□□□□□ -1.02
RFC4-214ENST00000494047 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
RFC4-214ENST00000494047 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
RFC4-214ENST00000494047 G3V4G9 280 aa8.67□□□□□ -1.02
RFC4-214ENST00000494047 LY6G6DO95868 133 aa8.67□□□□□ -1.02
RFC4-214ENST00000494047 FXYD7P58549 80 aa8.67□□□□□ -1.02
RFC4-214ENST00000494047 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms