RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ZNF355PQ9NSJ1 428 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 LYSTQ99698 3801 aa6.24□□□□□ -1.41
HDAC6-234ENST00000493923 TRAV41A0A0B4J266 112 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 B5MCH6 92 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 PRSS46E5RG02 174 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 M0QXV9 152 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 PEX7O00628 323 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 CNIH1O95406 144 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 SLURP1P55000 103 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 EIF4EBP1Q13541 118 aaPredicted RBP6.23□□□□□ -1.41
HDAC6-234ENST00000493923 ECSCRQ19T08 205 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 RRN3P1Q2M238 152 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 TMEM30BQ3MIR4 351 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 LINC00173Q6ZV60 143 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 OR1L4Q8NGR5 311 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 PRSS3P2Q8NHM4 247 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 PHLDA1Q8WV24 401 aaPredicted RBP6.23□□□□□ -1.41
HDAC6-234ENST00000493923 DLX4Q92988 240 aaPredicted RBP6.23□□□□□ -1.41
HDAC6-234ENST00000493923 DAZAP1Q96EP5 407 aaKnown RBP6.23□□□□□ -1.41
HDAC6-234ENST00000493923 ZNF414Q96IQ9 312 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 MCRIP2Q9BUT9 160 aaKnown RBP6.23□□□□□ -1.41
HDAC6-234ENST00000493923 CHAC1Q9BUX1 264 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 TMEM140Q9NV12 185 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 PRO0461Q9UI25 63 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 ZNF580Q9UK33 172 aa6.23□□□□□ -1.41
HDAC6-234ENST00000493923 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 A0A087WW49 117 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 FABP5P3A8MUU1 101 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 GGTLC3B5MD39 225 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 RHODO00212 210 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 P01737 135 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 IGHV3-11P01762 117 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 IGKV1-16P04430 117 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 DUTP33316 252 aaKnown RBP6.22□□□□□ -1.41
HDAC6-234ENST00000493923 C9orf66Q5T8R8 295 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 SPATA31B1PQ5VZV4 182 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 OR5AN1Q8NGI8 311 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 ARPC1AQ92747 370 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 TP73-AS1Q9UF72 201 aa6.22□□□□□ -1.41
HDAC6-234ENST00000493923 TMEM213A2RRL7 107 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 IGLV2-23P01705 113 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 HBDP02042 147 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 APOHP02749 345 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-234ENST00000493923 ZNF688P0C7X2 276 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 DEFA4P12838 97 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 CRIP2P52943 208 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-234ENST00000493923 UBE2L3P68036 154 aaKnown RBP6.21□□□□□ -1.42
HDAC6-234ENST00000493923 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 MRPL23Q16540 153 aaKnown RBP6.21□□□□□ -1.42
HDAC6-234ENST00000493923 MRGPRG-AS1Q2M3A8 158 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 TTC32Q5I0X7 151 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 PTH2Q96A98 100 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 FMC1Q96HJ9 113 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 UBE2E2Q96LR5 201 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
HDAC6-234ENST00000493923 RAB9BQ9NP90 201 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 DNAH1Q9P2D7 4330 aa6.21□□□□□ -1.42
HDAC6-234ENST00000493923 TRBV20-1A0A075B6N2 111 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 TRBV6-1A0A0K0K1D8 114 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 NPIPB6E9PJ23 425 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 ATP5LO75964 103 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 SNCGO76070 127 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 IFITM1P13164 125 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 EVI2AP22794 236 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 NMUP48645 174 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 FOXA3P55318 350 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-234ENST00000493923 ATP5G2Q06055 141 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 PPP1R27Q86WC6 154 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 TEN1Q86WV5 123 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 SBSPONQ8IVN8 264 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 ZC2HC1AQ96GY0 325 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 WWC2-AS2Q96NR7 200 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 NHP2Q9NX24 153 aaKnown RBP6.2□□□□□ -1.42
HDAC6-234ENST00000493923 ZNF256Q9Y2P7 627 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-234ENST00000493923 KLF12Q9Y4X4 402 aa6.2□□□□□ -1.42
HDAC6-234ENST00000493923 TRAV5A0A0B4J249 113 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 SRRM4A7MD48 611 aaKnown RBP6.19□□□□□ -1.42
HDAC6-234ENST00000493923 OVOL1O14753 267 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 SNAI2O43623 268 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 IL4P05112 153 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 SLC25A5P05141 298 aaKnown RBP6.19□□□□□ -1.42
HDAC6-234ENST00000493923 CRYGBP07316 175 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 LGALS1P09382 135 aaKnown RBP6.19□□□□□ -1.42
HDAC6-234ENST00000493923 FXYD2P54710 66 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 XGP55808 180 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
HDAC6-234ENST00000493923 CACNG7P62955 275 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 C12orf74Q32Q52 190 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 CFAP126Q5VTH2 177 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 SH2D6Q7Z4S9 175 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 OR8A1Q8NGG7 326 aa6.19□□□□□ -1.42
HDAC6-234ENST00000493923 OSR1Q8TAX0 266 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-234ENST00000493923 IFI27L1Q96BM0 104 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms