RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 MUC4Q99102 2169 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 K7EMI3 77 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 SAP30O75446 220 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 FABP2P12104 132 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 OR5A1Q8NGJ0 315 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 CCL19Q99731 98 aa12.14□□□□□ -0.47
SEMA4D-220ENST00000492386 MGPP08493 103 aa12.13□□□□□ -0.47
SEMA4D-220ENST00000492386 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-220ENST00000492386 CHTOPQ9Y3Y2 248 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-220ENST00000492386 IGHV4-30-2A0A087WSY4 118 aa12.12□□□□□ -0.47
SEMA4D-220ENST00000492386 NDUFS8O00217 210 aa12.12□□□□□ -0.47
SEMA4D-220ENST00000492386 NXPH4O95158 308 aa12.12□□□□□ -0.47
SEMA4D-220ENST00000492386 EDN2P20800 178 aa12.12□□□□□ -0.47
SEMA4D-220ENST00000492386 CFHR3Q02985 330 aa12.12□□□□□ -0.47
SEMA4D-220ENST00000492386 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
SEMA4D-220ENST00000492386 NHP2Q9NX24 153 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-220ENST00000492386 AGRNO00468 2067 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 KLLNB2CW77 178 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 SRD5A1P18405 259 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 TAL2Q16559 108 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 NEGR1Q7Z3B1 354 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 LINC00315P59091 139 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 CLEC2AQ6UVW9 174 aa12.11□□□□□ -0.47
SEMA4D-220ENST00000492386 MSMBP08118 114 aa12.1□□□□□ -0.47
SEMA4D-220ENST00000492386 BAALCQ8WXS3 180 aa12.1□□□□□ -0.47
SEMA4D-220ENST00000492386 ATP5J2P56134 94 aa12.1□□□□□ -0.47
SEMA4D-220ENST00000492386 PPP1R17O96001 155 aa12.09□□□□□ -0.47
SEMA4D-220ENST00000492386 CSTL1Q9H114 145 aa12.09□□□□□ -0.47
SEMA4D-220ENST00000492386 K7EMT4 169 aa12.08□□□□□ -0.47
SEMA4D-220ENST00000492386 AVPP01185 164 aa12.08□□□□□ -0.47
SEMA4D-220ENST00000492386 DCANP1Q8TF63 244 aa12.08□□□□□ -0.47
SEMA4D-220ENST00000492386 OR11H12B2RN74 326 aa12.08□□□□□ -0.48
SEMA4D-220ENST00000492386 OR11H1Q8NG94 326 aa12.08□□□□□ -0.48
SEMA4D-220ENST00000492386 OR11H2Q8NH07 326 aa12.08□□□□□ -0.48
SEMA4D-220ENST00000492386 MAP1AP78559 2803 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-220ENST00000492386 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 MYMXA0A1B0GTQ4 84 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 PRSS29PA6NIE9 313 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 E9PLD3 99 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 IGHV4OR15-8A0A075B7B6 117 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 A0A087WW49 117 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 LINC01619G3V211 115 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 G3V4G9 280 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 HIST1H4GQ99525 98 aa12.07□□□□□ -0.48
SEMA4D-220ENST00000492386 IGLL5B9A064 214 aa12.06□□□□□ -0.48
SEMA4D-220ENST00000492386 C12orf74Q32Q52 190 aa12.06□□□□□ -0.48
SEMA4D-220ENST00000492386 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
SEMA4D-220ENST00000492386 JPT2Q9H910 190 aa12.06□□□□□ -0.48
SEMA4D-220ENST00000492386 ID1P41134 155 aa12.06□□□□□ -0.48
SEMA4D-220ENST00000492386 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-220ENST00000492386 CELSR2Q9HCU4 2923 aa12.06□□□□□ -0.48
SEMA4D-220ENST00000492386 SPG11Q96JI7 2443 aa12.05□□□□□ -0.48
SEMA4D-220ENST00000492386 DUSP14O95147 198 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-220ENST00000492386 WFDC12Q8WWY7 111 aa12.05□□□□□ -0.48
SEMA4D-220ENST00000492386 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
SEMA4D-220ENST00000492386 CFAP46Q8IYW2 2715 aa12.05□□□□□ -0.48
SEMA4D-220ENST00000492386 COL12A1Q99715 3063 aa12.05□□□□□ -0.48
SEMA4D-220ENST00000492386 PSMB8P28062 276 aa12.05□□□□□ -0.48
SEMA4D-220ENST00000492386 PKD1L2Q7Z442 2459 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 TSHBP01222 138 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 CRYGDP07320 174 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 LGALS1P09382 135 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 POLR2KP53803 58 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 SUMO4Q6EEV6 95 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 SAMD13Q5VXD3 122 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 PRADC1Q9BSG0 188 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 CYSLTR1Q9Y271 337 aa12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEMA4D-220ENST00000492386 CD7P09564 240 aa12.03□□□□□ -0.48
SEMA4D-220ENST00000492386 A0A087WWL8 130 aa12.03□□□□□ -0.48
SEMA4D-220ENST00000492386 A0A1B0GWB2 263 aa12.03□□□□□ -0.48
SEMA4D-220ENST00000492386 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
SEMA4D-220ENST00000492386 B4DSR2 109 aa12.03□□□□□ -0.48
SEMA4D-220ENST00000492386 ZFP2Q6ZN57 461 aa12.03□□□□□ -0.48
SEMA4D-220ENST00000492386 ZNF479Q96JC4 524 aa12.03□□□□□ -0.48
SEMA4D-220ENST00000492386 COTL1Q14019 142 aa12.02□□□□□ -0.49
SEMA4D-220ENST00000492386 C10orf99Q6UWK7 81 aa12.02□□□□□ -0.49
SEMA4D-220ENST00000492386 FOXI2Q6ZQN5 318 aa12.02□□□□□ -0.49
SEMA4D-220ENST00000492386 TP53TG1Q9Y2A0 90 aa12.02□□□□□ -0.49
SEMA4D-220ENST00000492386 IGLV4-69A0A075B6H9 119 aa12.01□□□□□ -0.49
SEMA4D-220ENST00000492386 COX6B1P14854 86 aa12.01□□□□□ -0.49
SEMA4D-220ENST00000492386 FLNCQ14315 2725 aa12.01□□□□□ -0.49
SEMA4D-220ENST00000492386 CSPG4Q6UVK1 2322 aa12.01□□□□□ -0.49
SEMA4D-220ENST00000492386 IGHV4-59P01825 116 aa12.01□□□□□ -0.49
SEMA4D-220ENST00000492386 RIPPLY3P57055 190 aa12.01□□□□□ -0.49
SEMA4D-220ENST00000492386 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
SEMA4D-220ENST00000492386 IGHV3-16A0A0C4DH30 117 aa12□□□□□ -0.49
SEMA4D-220ENST00000492386 ZNF688P0C7X2 276 aa12□□□□□ -0.49
SEMA4D-220ENST00000492386 C9orf85Q96MD7 179 aa12□□□□□ -0.49
SEMA4D-220ENST00000492386 ODF3Q96PU9 254 aa12□□□□□ -0.49
SEMA4D-220ENST00000492386 C11orf86A6NJI1 115 aa12□□□□□ -0.49
SEMA4D-220ENST00000492386 VCYO14598 125 aa12□□□□□ -0.49
SEMA4D-220ENST00000492386 RRN3P1Q2M238 152 aa12□□□□□ -0.49
SEMA4D-220ENST00000492386 DOPEY1Q5JWR5 2465 aa11.99□□□□□ -0.49
SEMA4D-220ENST00000492386 A0A0J9YX75 114 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms