RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TRBV6-1A0A0K0K1D8 114 aa16.91■□□□□ 0.3
UPF3A-209ENST00000492270 SCO2A0A1W2PP80 73 aa16.91■□□□□ 0.3
UPF3A-209ENST00000492270 LTAP01374 205 aa16.91■□□□□ 0.3
UPF3A-209ENST00000492270 ORM1P02763 201 aa16.91■□□□□ 0.3
UPF3A-209ENST00000492270 NHLRC2Q8NBF2 726 aa16.91■□□□□ 0.3
UPF3A-209ENST00000492270 hCG_2014768A0A024R1R8 64 aa16.9■□□□□ 0.3
UPF3A-209ENST00000492270 IGHV3-73A0A0B4J1V6 119 aa16.9■□□□□ 0.3
UPF3A-209ENST00000492270 B4DEV8 164 aa16.9■□□□□ 0.3
UPF3A-209ENST00000492270 M0R036 132 aa16.9■□□□□ 0.3
UPF3A-209ENST00000492270 S100A4P26447 101 aaKnown RBP16.9■□□□□ 0.3
UPF3A-209ENST00000492270 ASIPP42127 132 aa16.9■□□□□ 0.3
UPF3A-209ENST00000492270 KRBOX1C9JBD0 128 aa16.89■□□□□ 0.29
UPF3A-209ENST00000492270 SIVA1O15304 175 aa16.89■□□□□ 0.29
UPF3A-209ENST00000492270 C1QBP02746 253 aa16.89■□□□□ 0.29
UPF3A-209ENST00000492270 CCL20P78556 96 aa16.89■□□□□ 0.29
UPF3A-209ENST00000492270 PTH2Q96A98 100 aa16.89■□□□□ 0.29
UPF3A-209ENST00000492270 A0A1W2PPQ1 181 aa16.88■□□□□ 0.29
UPF3A-209ENST00000492270 H3BVH4 76 aa16.88■□□□□ 0.29
UPF3A-209ENST00000492270 ZNF674Q2M3X9 581 aa16.88■□□□□ 0.29
UPF3A-209ENST00000492270 FAM162BQ5T6X4 162 aa16.88■□□□□ 0.29
UPF3A-209ENST00000492270 GRIFINA4D1Z8 144 aa16.87■□□□□ 0.29
UPF3A-209ENST00000492270 SLC25A29Q8N8R3 303 aa16.87■□□□□ 0.29
UPF3A-209ENST00000492270 ZNF575Q86XF7 245 aa16.86■□□□□ 0.29
UPF3A-209ENST00000492270 TXNDC17Q9BRA2 123 aa16.86■□□□□ 0.29
UPF3A-209ENST00000492270 IL36BQ9NZH7 164 aa16.86■□□□□ 0.29
UPF3A-209ENST00000492270 TMSB15BA0A087X1C1 80 aa16.85■□□□□ 0.29
UPF3A-209ENST00000492270 WFDC10BQ8IUB3 73 aa16.85■□□□□ 0.29
UPF3A-209ENST00000492270 JPT2Q9H910 190 aa16.85■□□□□ 0.29
UPF3A-209ENST00000492270 GNG13Q9P2W3 67 aa16.85■□□□□ 0.29
UPF3A-209ENST00000492270 SULT1A2P50226 295 aa16.84■□□□□ 0.29
UPF3A-209ENST00000492270 LINC01559Q495D7 138 aa16.84■□□□□ 0.29
UPF3A-209ENST00000492270 DNLZQ5SXM8 178 aa16.84■□□□□ 0.29
UPF3A-209ENST00000492270 AKAP14Q86UN6 197 aa16.84■□□□□ 0.29
UPF3A-209ENST00000492270 PARLQ9H300 379 aa16.84■□□□□ 0.29
UPF3A-209ENST00000492270 DNAH11Q96DT5 4516 aa16.84■□□□□ 0.29
UPF3A-209ENST00000492270 ARMS2P0C7Q2 107 aa16.83■□□□□ 0.28
UPF3A-209ENST00000492270 RAB5CP51148 216 aa16.83■□□□□ 0.28
UPF3A-209ENST00000492270 LINC00315P59091 139 aa16.83■□□□□ 0.28
UPF3A-209ENST00000492270 EIF5AL1Q6IS14 154 aaKnown RBP16.83■□□□□ 0.28
UPF3A-209ENST00000492270 DYNC1H1Q14204 4646 aaKnown RBP16.82■□□□□ 0.28
UPF3A-209ENST00000492270 TRAV1-1A0A0B4J248 108 aa16.82■□□□□ 0.28
UPF3A-209ENST00000492270 TRBV6-4A0A1B0GX49 114 aa16.82■□□□□ 0.28
UPF3A-209ENST00000492270 CIDEAO60543 219 aa16.82■□□□□ 0.28
UPF3A-209ENST00000492270 S100A9P06702 114 aaKnown RBP16.82■□□□□ 0.28
UPF3A-209ENST00000492270 RHOHQ15669 191 aa16.82■□□□□ 0.28
UPF3A-209ENST00000492270 Q6ZSN1 163 aa16.82■□□□□ 0.28
UPF3A-209ENST00000492270 SLC51BQ86UW2 128 aa16.82■□□□□ 0.28
UPF3A-209ENST00000492270 MANBALQ9NQG1 85 aa16.82■□□□□ 0.28
UPF3A-209ENST00000492270 KIAA1109Q2LD37 5005 aa16.81■□□□□ 0.28
UPF3A-209ENST00000492270 DMRTA1Q5VZB9 504 aa16.81■□□□□ 0.28
UPF3A-209ENST00000492270 PRADC1Q9BSG0 188 aa16.81■□□□□ 0.28
UPF3A-209ENST00000492270 MLST8Q9BVC4 326 aa16.81■□□□□ 0.28
UPF3A-209ENST00000492270 SAMD10Q9BYL1 202 aa16.81■□□□□ 0.28
UPF3A-209ENST00000492270 A8MWV9 139 aa16.8■□□□□ 0.28
UPF3A-209ENST00000492270 RPL19P84098 196 aaKnown RBP16.8■□□□□ 0.28
UPF3A-209ENST00000492270 PIK3CD-AS1Q5SR53 167 aa16.8■□□□□ 0.28
UPF3A-209ENST00000492270 BAGE2Q86Y30 109 aa16.8■□□□□ 0.28
UPF3A-209ENST00000492270 C9orf62Q8N4C0 152 aa16.8■□□□□ 0.28
UPF3A-209ENST00000492270 DERL1Q9BUN8 251 aa16.8■□□□□ 0.28
UPF3A-209ENST00000492270 MGST1P10620 155 aaKnown RBP16.79■□□□□ 0.28
UPF3A-209ENST00000492270 UFSP1Q6NVU6 142 aa16.79■□□□□ 0.28
UPF3A-209ENST00000492270 HERC2O95714 4834 aa16.79■□□□□ 0.28
UPF3A-209ENST00000492270 RPL35P42766 123 aaKnown RBP16.78■□□□□ 0.28
UPF3A-209ENST00000492270 ZFP2Q6ZN57 461 aa16.78■□□□□ 0.28
UPF3A-209ENST00000492270 SH2D6Q7Z4S9 175 aa16.78■□□□□ 0.28
UPF3A-209ENST00000492270 C11orf52Q96A22 123 aa16.78■□□□□ 0.28
UPF3A-209ENST00000492270 SCRT2Q9NQ03 307 aa16.78■□□□□ 0.28
UPF3A-209ENST00000492270 TNFRSF18Q9Y5U5 241 aa16.78■□□□□ 0.28
UPF3A-209ENST00000492270 LY96Q9Y6Y9 160 aa16.78■□□□□ 0.28
UPF3A-209ENST00000492270 PRR27Q6MZM9 219 aa16.77■□□□□ 0.28
UPF3A-209ENST00000492270 Q6ZRN7 208 aaPredicted RBP16.77■□□□□ 0.28
UPF3A-209ENST00000492270 SYT8Q8NBV8 401 aa16.77■□□□□ 0.28
UPF3A-209ENST00000492270 PHLDA3Q9Y5J5 127 aa16.77■□□□□ 0.28
UPF3A-209ENST00000492270 M0R381 172 aa16.76■□□□□ 0.27
UPF3A-209ENST00000492270 BTF3P20290 206 aaKnown RBP16.76■□□□□ 0.27
UPF3A-209ENST00000492270 TEX46H3BTG2 121 aa16.75■□□□□ 0.27
UPF3A-209ENST00000492270 TIRAPP58753 221 aa16.75■□□□□ 0.27
UPF3A-209ENST00000492270 Q9UF83 564 aa16.75■□□□□ 0.27
UPF3A-209ENST00000492270 DNAH10OSP0CZ25 163 aa16.74■□□□□ 0.27
UPF3A-209ENST00000492270 FAM74A4Q5TZK3 123 aa16.74■□□□□ 0.27
UPF3A-209ENST00000492270 C14orf178Q8N769 122 aaPredicted RBP16.74■□□□□ 0.27
UPF3A-209ENST00000492270 A0A087WWL8 130 aa16.73■□□□□ 0.27
UPF3A-209ENST00000492270 SFRP2Q96HF1 295 aa16.73■□□□□ 0.27
UPF3A-209ENST00000492270 GAGE12JA6NER3 117 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 LINC00694P0DN24 101 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 MEF2BQ02080 365 aaPredicted RBP16.72■□□□□ 0.27
UPF3A-209ENST00000492270 GAGE1Q13065 139 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 GAGE4Q13068 117 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 GAGE5Q13069 117 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 GAGE13Q4V321 117 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 CENPWQ5EE01 88 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 ZFP82Q8N141 532 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 ATP6V0E2Q8NHE4 81 aa16.72■□□□□ 0.27
UPF3A-209ENST00000492270 A0A1B0GVG6 124 aa16.71■□□□□ 0.27
UPF3A-209ENST00000492270 RHODO00212 210 aa16.71■□□□□ 0.27
UPF3A-209ENST00000492270 IGLV2-8P01709 118 aa16.71■□□□□ 0.27
UPF3A-209ENST00000492270 EVI2AP22794 236 aa16.71■□□□□ 0.27
UPF3A-209ENST00000492270 TRAV9-2A0A087WT02 112 aa16.7■□□□□ 0.26
UPF3A-209ENST00000492270 RAB19A4D1S5 217 aa16.7■□□□□ 0.26
UPF3A-209ENST00000492270 IFNA1P01562 189 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms