RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 LINC00315P59091 139 aa11.37□□□□□ -0.59
PDLIM2-217ENST00000491330 UBE2G2P60604 165 aa11.37□□□□□ -0.59
PDLIM2-217ENST00000491330 UBE2G1P62253 170 aa11.37□□□□□ -0.59
PDLIM2-217ENST00000491330 FAM213BQ8TBF2 198 aa11.37□□□□□ -0.59
PDLIM2-217ENST00000491330 TRAV1-1A0A0B4J248 108 aa11.36□□□□□ -0.59
PDLIM2-217ENST00000491330 RHOHQ15669 191 aa11.36□□□□□ -0.59
PDLIM2-217ENST00000491330 CST9LP1Q5W188 147 aa11.36□□□□□ -0.59
PDLIM2-217ENST00000491330 Q86TA4 180 aa11.36□□□□□ -0.59
PDLIM2-217ENST00000491330 SLC51BQ86UW2 128 aa11.36□□□□□ -0.59
PDLIM2-217ENST00000491330 PGPEP1Q9NXJ5 209 aa11.36□□□□□ -0.59
PDLIM2-217ENST00000491330 TRBV6-4A0A1B0GX49 114 aa11.35□□□□□ -0.59
PDLIM2-217ENST00000491330 CDK2AP2O75956 126 aa11.35□□□□□ -0.59
PDLIM2-217ENST00000491330 MGST1P10620 155 aaKnown RBP11.35□□□□□ -0.59
PDLIM2-217ENST00000491330 ASIPP42127 132 aa11.35□□□□□ -0.59
PDLIM2-217ENST00000491330 AKAP14Q86UN6 197 aa11.35□□□□□ -0.59
PDLIM2-217ENST00000491330 SYT8Q8NBV8 401 aa11.35□□□□□ -0.59
PDLIM2-217ENST00000491330 MANBALQ9NQG1 85 aa11.35□□□□□ -0.59
PDLIM2-217ENST00000491330 DNAH10Q8IVF4 4471 aa11.34□□□□□ -0.59
PDLIM2-217ENST00000491330 A8MWV9 139 aa11.34□□□□□ -0.59
PDLIM2-217ENST00000491330 GATA1P15976 413 aaPredicted RBP11.34□□□□□ -0.59
PDLIM2-217ENST00000491330 TIRAPP58753 221 aa11.34□□□□□ -0.59
PDLIM2-217ENST00000491330 KRTAP1-5Q9BYS1 174 aa11.34□□□□□ -0.59
PDLIM2-217ENST00000491330 RS1O15537 224 aa11.33□□□□□ -0.6
PDLIM2-217ENST00000491330 AKR1C3P42330 323 aa11.33□□□□□ -0.6
PDLIM2-217ENST00000491330 SULT1A2P50226 295 aa11.33□□□□□ -0.6
PDLIM2-217ENST00000491330 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-217ENST00000491330 DNLZQ5SXM8 178 aa11.33□□□□□ -0.6
PDLIM2-217ENST00000491330 MSRB1Q9NZV6 116 aa11.33□□□□□ -0.6
PDLIM2-217ENST00000491330 IGHV3-38A0A0C4DH36 116 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 PSCAO43653 123 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 PAGE4O60829 102 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 LTAP01374 205 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 CRYGDP07320 174 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 TAGLN2P37802 199 aaKnown RBP11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 OR10J3Q5JRS4 329 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 C9orf85Q96MD7 179 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
PDLIM2-217ENST00000491330 TRAV34A0A0B4J273 112 aa11.31□□□□□ -0.6
PDLIM2-217ENST00000491330 B4DEV8 164 aa11.31□□□□□ -0.6
PDLIM2-217ENST00000491330 DNAH10OSP0CZ25 163 aa11.31□□□□□ -0.6
PDLIM2-217ENST00000491330 CDPF1Q6NVV7 123 aa11.31□□□□□ -0.6
PDLIM2-217ENST00000491330 IL36BQ9NZH7 164 aa11.31□□□□□ -0.6
PDLIM2-217ENST00000491330 IFNA1P01562 189 aa11.3□□□□□ -0.6
PDLIM2-217ENST00000491330 ZNF674Q2M3X9 581 aa11.3□□□□□ -0.6
PDLIM2-217ENST00000491330 ZNF506Q5JVG8 444 aa11.3□□□□□ -0.6
PDLIM2-217ENST00000491330 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
PDLIM2-217ENST00000491330 SLC25A29Q8N8R3 303 aa11.3□□□□□ -0.6
PDLIM2-217ENST00000491330 ATP6V0E2Q8NHE4 81 aa11.3□□□□□ -0.6
PDLIM2-217ENST00000491330 IGHV3-73A0A0B4J1V6 119 aa11.29□□□□□ -0.6
PDLIM2-217ENST00000491330 RHODO00212 210 aa11.29□□□□□ -0.6
PDLIM2-217ENST00000491330 WFDC10BQ8IUB3 73 aa11.29□□□□□ -0.6
PDLIM2-217ENST00000491330 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
PDLIM2-217ENST00000491330 C11orf21Q9P2W6 132 aa11.29□□□□□ -0.6
PDLIM2-217ENST00000491330 IGKV3D-20A0A0C4DH25 116 aa11.28□□□□□ -0.6
PDLIM2-217ENST00000491330 PGPEP1LA6NFU8 196 aa11.28□□□□□ -0.6
PDLIM2-217ENST00000491330 CXCL1P09341 107 aa11.28□□□□□ -0.6
PDLIM2-217ENST00000491330 RNASE3P12724 160 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-217ENST00000491330 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
PDLIM2-217ENST00000491330 ZC2HC1AQ96GY0 325 aa11.28□□□□□ -0.6
PDLIM2-217ENST00000491330 PHLDA3Q9Y5J5 127 aa11.28□□□□□ -0.6
PDLIM2-217ENST00000491330 A0A087WWC5 75 aa11.27□□□□□ -0.61
PDLIM2-217ENST00000491330 PDE6DO43924 150 aa11.27□□□□□ -0.61
PDLIM2-217ENST00000491330 LELP1Q5T871 98 aa11.27□□□□□ -0.61
PDLIM2-217ENST00000491330 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
PDLIM2-217ENST00000491330 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
PDLIM2-217ENST00000491330 GTSF1LQ9H1H1 148 aa11.27□□□□□ -0.61
PDLIM2-217ENST00000491330 LOC100131303A0A0U1RQF7 123 aa11.26□□□□□ -0.61
PDLIM2-217ENST00000491330 KRBOX1C9JBD0 128 aa11.26□□□□□ -0.61
PDLIM2-217ENST00000491330 LINC01556Q5JQF7 62 aa11.26□□□□□ -0.61
PDLIM2-217ENST00000491330 TOR2AQ5JU69 321 aa11.26□□□□□ -0.61
PDLIM2-217ENST00000491330 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.26□□□□□ -0.61
PDLIM2-217ENST00000491330 MLST8Q9BVC4 326 aa11.26□□□□□ -0.61
PDLIM2-217ENST00000491330 HECTD4Q9Y4D8 3996 aa11.26□□□□□ -0.61
PDLIM2-217ENST00000491330 M0R036 132 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 SH2D1AO60880 128 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 KCNIP4Q6PIL6 250 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 BAGE2Q86Y30 109 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 C9orf62Q8N4C0 152 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 BIN3Q9NQY0 253 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 GNG13Q9P2W3 67 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 URGCP-MRPS24S4R325 110 aa11.25□□□□□ -0.61
PDLIM2-217ENST00000491330 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
PDLIM2-217ENST00000491330 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
PDLIM2-217ENST00000491330 CRIP1P50238 77 aa11.24□□□□□ -0.61
PDLIM2-217ENST00000491330 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
PDLIM2-217ENST00000491330 Q6ZRN7 208 aaPredicted RBP11.24□□□□□ -0.61
PDLIM2-217ENST00000491330 ZFP82Q8N141 532 aa11.24□□□□□ -0.61
PDLIM2-217ENST00000491330 PARLQ9H300 379 aa11.24□□□□□ -0.61
PDLIM2-217ENST00000491330 A0A1B0GV50 99 aa11.23□□□□□ -0.61
PDLIM2-217ENST00000491330 H3BVH4 76 aa11.23□□□□□ -0.61
PDLIM2-217ENST00000491330 BLOC1S1P78537 153 aa11.23□□□□□ -0.61
PDLIM2-217ENST00000491330 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
PDLIM2-217ENST00000491330 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
PDLIM2-217ENST00000491330 A0A087WTM6 91 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
PDLIM2-217ENST00000491330 RPL35P42766 123 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms