RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	MED14OS	P0DP75	135 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	ASIP	P42127	132 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	FER1L6-AS1	Q8NA97	138 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	BTF3L4	Q96K17	158 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	LINC01587	Q99440	93 aa		13.14	□□□□□ -0.31
SRM-206	ENST00000490101	CTRL	P40313	264 aa		13.13	□□□□□ -0.31
SRM-206	ENST00000490101	PGLYRP4	Q96LB8	373 aa		13.13	□□□□□ -0.31
SRM-206	ENST00000490101	TMEM208	Q9BTX3	173 aa		13.13	□□□□□ -0.31
SRM-206	ENST00000490101	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.13	□□□□□ -0.31
SRM-206	ENST00000490101	TRGV11	A0A075B6L2	103 aa		13.12	□□□□□ -0.31
SRM-206	ENST00000490101	IGHV3-16	A0A0C4DH30	117 aa		13.12	□□□□□ -0.31
SRM-206	ENST00000490101	COLCA2	A8K830	154 aa		13.12	□□□□□ -0.31
SRM-206	ENST00000490101		F2Z2F3	143 aa		13.12	□□□□□ -0.31
SRM-206	ENST00000490101	OR5AL1	P0C617	328 aa		13.12	□□□□□ -0.31
SRM-206	ENST00000490101	LYZL1	Q6UWQ5	148 aa		13.12	□□□□□ -0.31
SRM-206	ENST00000490101	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.12	□□□□□ -0.31
SRM-206	ENST00000490101	TP53TG3	Q9ULZ0	132 aa		13.12	□□□□□ -0.31
SRM-206	ENST00000490101	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.11	□□□□□ -0.31
SRM-206	ENST00000490101	CBY3	A6NI87	242 aa		13.11	□□□□□ -0.31
SRM-206	ENST00000490101	SNAI2	O43623	268 aa		13.11	□□□□□ -0.31
SRM-206	ENST00000490101	ARMS2	P0C7Q2	107 aa		13.11	□□□□□ -0.31
SRM-206	ENST00000490101	S100A4	P26447	101 aa	Known RBP	13.11	□□□□□ -0.31
SRM-206	ENST00000490101	WDR73	Q6P4I2	378 aa		13.11	□□□□□ -0.31
SRM-206	ENST00000490101	IL17D	Q8TAD2	202 aa		13.11	□□□□□ -0.31
SRM-206	ENST00000490101	SCRT2	Q9NQ03	307 aa		13.11	□□□□□ -0.31
SRM-206	ENST00000490101	RNASE3	P12724	160 aa	Known RBP	13.1	□□□□□ -0.31
SRM-206	ENST00000490101	ATP5L2	Q7Z4Y8	100 aa		13.1	□□□□□ -0.31
SRM-206	ENST00000490101	TPPP3	Q9BW30	176 aa		13.1	□□□□□ -0.31
SRM-206	ENST00000490101	CNFN	Q9BYD5	112 aa		13.1	□□□□□ -0.31
SRM-206	ENST00000490101	IGHV3OR16-12	A0A075B7B8	117 aa		13.09	□□□□□ -0.31
SRM-206	ENST00000490101		A0A1B0GUT8	65 aa		13.09	□□□□□ -0.31
SRM-206	ENST00000490101		H3BVH4	76 aa		13.09	□□□□□ -0.31
SRM-206	ENST00000490101	FAM210B	Q96KR6	192 aa		13.09	□□□□□ -0.31
SRM-206	ENST00000490101	C9orf85	Q96MD7	179 aa		13.09	□□□□□ -0.31
SRM-206	ENST00000490101	MDFIC	Q9P1T7	246 aa		13.09	□□□□□ -0.31
SRM-206	ENST00000490101	HTN1	P15515	57 aa		13.08	□□□□□ -0.32
SRM-206	ENST00000490101		Q6ZWC4	215 aa		13.08	□□□□□ -0.32
SRM-206	ENST00000490101	BORCS7	Q96B45	105 aa		13.08	□□□□□ -0.32
SRM-206	ENST00000490101	IGHV4-4	A0A075B6R2	117 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101		A0A1B0GW15	77 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101		A0A1B0GXF2	115 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101	SPINK4	O60575	86 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101	CACNG7	P62955	275 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101	ZNF415	Q09FC8	603 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101	RIG	Q13278	110 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101	MRPL54	Q6P161	138 aa	Known RBP	13.07	□□□□□ -0.32
SRM-206	ENST00000490101	RASL11A	Q6T310	242 aa		13.07	□□□□□ -0.32
SRM-206	ENST00000490101	PRM2	P04554	102 aa		13.06	□□□□□ -0.32
SRM-206	ENST00000490101	AZU1	P20160	251 aa		13.06	□□□□□ -0.32
SRM-206	ENST00000490101	ZNF493	Q6ZR52	646 aa		13.06	□□□□□ -0.32
SRM-206	ENST00000490101	C11orf72	Q8NBR9	251 aa		13.06	□□□□□ -0.32
SRM-206	ENST00000490101	OR10AG1	Q8NH19	301 aa		13.06	□□□□□ -0.32
SRM-206	ENST00000490101	SMIM9	A6NGZ8	99 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	RAB5A	P20339	215 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	HBB	P68871	147 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	RRN3P1	Q2M238	152 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	COX19	Q49B96	90 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	RNASE8	Q8TDE3	154 aa	Known RBP	13.05	□□□□□ -0.32
SRM-206	ENST00000490101	TMEM263	Q8WUH6	116 aa	Known RBP	13.05	□□□□□ -0.32
SRM-206	ENST00000490101	RNF183	Q96D59	192 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	SPX	Q9BT56	116 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	PHLDA3	Q9Y5J5	127 aa		13.05	□□□□□ -0.32
SRM-206	ENST00000490101	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.05	□□□□□ -0.32
SRM-206	ENST00000490101	MUC21	A0A0G2JKD1	596 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	MUC21	A0A140T8X8	626 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	NXPH4	O95158	308 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	S100A8	P05109	93 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	NTF3	P20783	257 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	DEFB135	Q30KP9	77 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	SPANXN1	Q5VSR9	72 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	PTH2	Q96A98	100 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	OVOL2	Q9BRP0	275 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	GSN-AS1	Q9NRJ2	163 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101		X6R8D5	127 aa		13.04	□□□□□ -0.32
SRM-206	ENST00000490101	SPRY2	O43597	315 aa		13.03	□□□□□ -0.32
SRM-206	ENST00000490101	GATD1	Q8NB37	220 aa		13.03	□□□□□ -0.32
SRM-206	ENST00000490101	C16orf74	Q96GX8	76 aa		13.03	□□□□□ -0.32
SRM-206	ENST00000490101	GNB1L	Q9BYB4	327 aa		13.03	□□□□□ -0.32
SRM-206	ENST00000490101	TP53TG1	Q9Y2A0	90 aa		13.03	□□□□□ -0.32
SRM-206	ENST00000490101	CAMP	P49913	170 aa		13.02	□□□□□ -0.33
SRM-206	ENST00000490101	TWIST1	Q15672	202 aa		13.02	□□□□□ -0.33
SRM-206	ENST00000490101	TMEM136	Q6ZRR5	245 aa		13.02	□□□□□ -0.33
SRM-206	ENST00000490101	ZFP82	Q8N141	532 aa		13.02	□□□□□ -0.33
SRM-206	ENST00000490101	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.02	□□□□□ -0.33
SRM-206	ENST00000490101	MSRB1	Q9NZV6	116 aa		13.02	□□□□□ -0.33
SRM-206	ENST00000490101	MUC4	Q99102	2169 aa		13.02	□□□□□ -0.33
SRM-206	ENST00000490101	PIK3CD-AS1	Q5SR53	167 aa		13.01	□□□□□ -0.33
SRM-206	ENST00000490101	SYT8	Q8NBV8	401 aa		13.01	□□□□□ -0.33
SRM-206	ENST00000490101	PLAC8L1	A1L4L8	177 aa		13	□□□□□ -0.33
SRM-206	ENST00000490101		M0R2P5	195 aa		13	□□□□□ -0.33
SRM-206	ENST00000490101		M0R381	172 aa		13	□□□□□ -0.33
SRM-206	ENST00000490101	MT-ND6	P03923	174 aa		13	□□□□□ -0.33
SRM-206	ENST00000490101	RPS10	P46783	165 aa	Known RBP	13	□□□□□ -0.33
SRM-206	ENST00000490101	SST	P61278	116 aa		13	□□□□□ -0.33
SRM-206	ENST00000490101	DAZ2	Q13117	558 aa	Known RBP	13	□□□□□ -0.33
SRM-206	ENST00000490101	DMRTA1	Q5VZB9	504 aa		13	□□□□□ -0.33
SRM-206	ENST00000490101	OR11H2	Q8NH07	326 aa		13	□□□□□ -0.33
SRM-206	ENST00000490101		A0A0J9YWU9	116 aa		12.99	□□□□□ -0.33
SRM-206	ENST00000490101	SNURFL	B1AK76	121 aa		12.99	□□□□□ -0.33
SRM-206	ENST00000490101	HLA-DQA1	P01909	254 aa		12.99	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms