RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 PTPRGP23470 1445 aa0.88□□□□□ -2.27
NF1-213ENST00000489712 KIDINS220Q9ULH0 1771 aa0.88□□□□□ -2.27
NF1-213ENST00000489712 MUC4Q99102 2169 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 WDR97A6NE52 1622 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 TRAV12-2A0A075B6T6 113 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 TRBV10-1A0A0K0K1A3 114 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 IL5P05113 134 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 LYNX1P0DP58 116 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 FXYD4P59646 89 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 WHAMMP3Q1A5X7 153 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 NDUFA11Q86Y39 141 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 PPP1R1CQ8WVI7 109 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 TMEM203Q969S6 136 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 SDF2Q99470 211 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 TMEM242Q9NWH2 141 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 MRPL35Q9NZE8 188 aaKnown RBP0.87□□□□□ -2.27
NF1-213ENST00000489712 MYOM3Q5VTT5 1437 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 MYH6P13533 1939 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 MCM3APO60318 1980 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 CASP8AP2Q9UKL3 1982 aa0.87□□□□□ -2.27
NF1-213ENST00000489712 ROCK2O75116 1388 aaKnown RBP0.86□□□□□ -2.27
NF1-213ENST00000489712 NINQ8N4C6 2090 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 A0A1B0GV90 55 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 DLEU1O43261 78 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 NDUFB6O95139 128 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 CCKP06307 115 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 PIRTP0C851 137 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 PRB4P10163 310 aaPredicted RBP0.86□□□□□ -2.27
NF1-213ENST00000489712 SLC25A6P12236 298 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 FGF7P21781 194 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 MRPS10P82664 201 aaKnown RBP0.86□□□□□ -2.27
NF1-213ENST00000489712 MEIG1Q5JSS6 88 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 Q6ZQY7 126 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 DPH3Q96FX2 82 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 SNRNP25Q9BV90 132 aaKnown RBP0.86□□□□□ -2.27
NF1-213ENST00000489712 NAA60Q9H7X0 242 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 C22orf24Q9Y442 160 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 SMG6Q86US8 1419 aaKnown RBP0.86□□□□□ -2.27
NF1-213ENST00000489712 PEG3Q9GZU2 1588 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 PEAK1Q9H792 1746 aa0.86□□□□□ -2.27
NF1-213ENST00000489712 UNC13CQ8NB66 2214 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 TEX49A0A1B0GTD5 131 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 TCRBV3S1A0A5B6 114 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 IFNA17P01571 189 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 IFNGP01579 166 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 AKAIN1P0CW23 69 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 XAF1Q6GPH4 301 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 LINC00575Q6W349 94 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 CYP2G1PQ6ZSU1 146 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 SBSPONQ8IVN8 264 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.85□□□□□ -2.27
NF1-213ENST00000489712 TMEM141Q96I45 108 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 C2orf88Q9BSF0 95 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 SEC11CQ9BY50 192 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 RPRMQ9NS64 109 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 NDUFA12Q9UI09 145 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 GNG8Q9UK08 70 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 NCOA3Q9Y6Q9 1424 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 MYH7P12883 1935 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 LRP5O75197 1615 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 SPEF2Q9C093 1822 aa0.85□□□□□ -2.27
NF1-213ENST00000489712 PRRC2BQ5JSZ5 2229 aaKnown RBP0.84□□□□□ -2.27
NF1-213ENST00000489712 EIF4G3O43432 1585 aaKnown RBP0.84□□□□□ -2.27
NF1-213ENST00000489712 DAPK1P53355 1430 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 TRBV30A0A0K0K1B3 111 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 CXorf51AA0A1B0GTR3 108 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 HIST1H1DP16402 221 aaKnown RBP0.84□□□□□ -2.27
NF1-213ENST00000489712 CAV3P56539 151 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 BTG2P78543 158 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 SLC48A1Q6P1K1 146 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 Q6ZS92 163 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 Q86TA4 180 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 SPANXDQ9BXN6 97 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 AGPAT4-IT1Q9H0P7 198 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 COA4Q9NYJ1 87 aa0.84□□□□□ -2.27
NF1-213ENST00000489712 MYH9P35579 1960 aaKnown RBP0.84□□□□□ -2.28
NF1-213ENST00000489712 CDK12Q9NYV4 1490 aaPredicted RBP0.84□□□□□ -2.28
NF1-213ENST00000489712 E9PCH4 1651 aa0.84□□□□□ -2.28
NF1-213ENST00000489712 SDK1Q7Z5N4 2213 aa0.84□□□□□ -2.28
NF1-213ENST00000489712 ATG2AQ2TAZ0 1938 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 ADGRB1O14514 1584 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 EML5Q05BV3 1969 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 KIF13AQ9H1H9 1805 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 LOC101927531A0A1B0GV80 90 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 F6UZH7 168 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 FXYD1O00168 92 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 SNAPC5O75971 98 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 CBLN1P23435 193 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 EFNA4P52798 201 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 Q56UQ5 140 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 C12orf73Q69YU5 71 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 PP6455Q8WZ26 134 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 SERP1Q9Y6X1 66 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 NALCNQ8IZF0 1738 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 CASZ1Q86V15 1759 aa0.83□□□□□ -2.28
NF1-213ENST00000489712 PHRF1Q9P1Y6 1649 aaKnown RBP0.82□□□□□ -2.28
NF1-213ENST00000489712 CFTRP13569 1480 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms