RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 TRAV8-6A0A0B4J262 113 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 A8MWV9 139 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 C16orf90A8MZG2 172 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 PAGE4O60829 102 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 OR10J3Q5JRS4 329 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 CFAP126Q5VTH2 177 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 LYPD5Q6UWN5 251 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 NFE4Q86UQ8 179 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 OR11H4Q8NGC9 324 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 BOLA1Q9Y3E2 137 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 PHLDA3Q9Y5J5 127 aa6.29□□□□□ -1.4
HDAC6-232ENST00000489053 MUC4Q99102 2169 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 H3BVH4 76 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 SH2D1AO60880 128 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 IFNA1P01562 189 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 MED14OSP0DP75 135 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 MGST1P10620 155 aaKnown RBP6.28□□□□□ -1.4
HDAC6-232ENST00000489053 GATA1P15976 413 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-232ENST00000489053 RAB5CP51148 216 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 TNP2Q05952 138 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 ZNF506Q5JVG8 444 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 C10orf126Q8N4M7 172 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 ZC2HC1AQ96GY0 325 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 C9orf85Q96MD7 179 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 MANBALQ9NQG1 85 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 C11orf21Q9P2W6 132 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 PKD1P98161 4303 aa6.28□□□□□ -1.4
HDAC6-232ENST00000489053 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.4
HDAC6-232ENST00000489053 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 TRBV6-4A0A1B0GX49 114 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 GRIFINA4D1Z8 144 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 K7EP13 123 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 RHODO00212 210 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 RS1O15537 224 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 LINC00315P59091 139 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 ERVFC1-1P60608 527 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 SLC25A29Q8N8R3 303 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 MBD3L1Q8WWY6 194 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 IL36BQ9NZH7 164 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 GNG13Q9P2W3 67 aa6.27□□□□□ -1.41
HDAC6-232ENST00000489053 NACAE9PAV3 2078 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 TRBV6-1A0A0K0K1D8 114 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 LOC100131303A0A0U1RQF7 123 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 PGPEP1LA6NFU8 196 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 KRBOX1C9JBD0 128 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 M0R381 172 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 PSCAO43653 123 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 LTAP01374 205 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 CRYGDP07320 174 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 ARMS2P0C7Q2 107 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 FAM74A4Q5TZK3 123 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 PRR27Q6MZM9 219 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 KCNIP4Q6PIL6 250 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 ZFP2Q6ZN57 461 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 AKAP14Q86UN6 197 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 BAGE2Q86Y30 109 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 WFDC10BQ8IUB3 73 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 ZFP82Q8N141 532 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 PTH2Q96A98 100 aa6.26□□□□□ -1.41
HDAC6-232ENST00000489053 IGKV3D-20A0A0C4DH25 116 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 SCO2A0A1W2PP80 73 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 RNASE3P12724 160 aaKnown RBP6.25□□□□□ -1.41
HDAC6-232ENST00000489053 PIK3CD-AS1Q5SR53 167 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 SPATA12Q7Z6I5 190 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 ZNF575Q86XF7 245 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 TCTE3Q8IZS6 198 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.25□□□□□ -1.41
HDAC6-232ENST00000489053 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 DAZAP1Q96EP5 407 aaKnown RBP6.25□□□□□ -1.41
HDAC6-232ENST00000489053 KRTAP1-5Q9BYS1 174 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 MSRB1Q9NZV6 116 aa6.25□□□□□ -1.41
HDAC6-232ENST00000489053 hCG_2014768A0A024R1R8 64 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 IGHV3-38A0A0C4DH36 116 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 GAGE12JA6NER3 117 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 TIRAPP58753 221 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 GAGE1Q13065 139 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 GAGE4Q13068 117 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 GAGE5Q13069 117 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 ZNF674Q2M3X9 581 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 LINC01559Q495D7 138 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 GAGE13Q4V321 117 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 SLC51BQ86UW2 128 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 GTSF1LQ9H1H1 148 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 PARLQ9H300 379 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 URGCP-MRPS24S4R325 110 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 HERC2O95714 4834 aa6.24□□□□□ -1.41
HDAC6-232ENST00000489053 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
HDAC6-232ENST00000489053 A0A087WWC5 75 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 A0A087WWL8 130 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 PDE6DO43924 150 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 C1QBP02746 253 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 DNAH10OSP0CZ25 163 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 RPL35P42766 123 aaKnown RBP6.23□□□□□ -1.41
HDAC6-232ENST00000489053 GNG4P50150 75 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 CRIP1P50238 77 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 ZNF56Q15929 161 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 LELP1Q5T871 98 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 SPANXN1Q5VSR9 72 aa6.23□□□□□ -1.41
HDAC6-232ENST00000489053 COX8CQ7Z4L0 72 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms