RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.96□□□□□ -1.616e-13■□□□□ 8.7
HDLBP-243ENST00000488923 IGKV3-7A0A075B6H7 116 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 TRGV11A0A075B6L2 103 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 LOC389332A0A1B0GUA5 103 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 H3BS24 57 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 ZNF688P0C7X2 276 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 SMIM17P0DL12 118 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 EVI2AP22794 236 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 WFDC11Q8NEX6 87 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 OR9G4Q8NGQ1 327 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 DYNLRB2Q8TF09 96 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 ZNF418Q8TF45 676 aaPredicted RBP4.96□□□□□ -1.62
HDLBP-243ENST00000488923 JMJD8Q96S16 334 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 C16orf95Q9H693 158 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 MSRB1Q9NZV6 116 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 UBR5O95071 2799 aaPredicted RBP4.96□□□□□ -1.62
HDLBP-243ENST00000488923 MED13LQ71F56 2210 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 USP9XQ93008 2570 aaPredicted RBP4.96□□□□□ -1.62
HDLBP-243ENST00000488923 DCHS2Q6V1P9 2916 aa4.96□□□□□ -1.62
HDLBP-243ENST00000488923 ZNF462Q96JM2 2506 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 MUC21A0A0G2JKD1 596 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 MUC21A0A140T8X8 626 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 DNAJC9-AS1A6NH13 148 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 TCAPO15273 167 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 PRB4P10163 310 aaPredicted RBP4.95□□□□□ -1.62
HDLBP-243ENST00000488923 RPL32P62910 135 aaKnown RBP4.95□□□□□ -1.62
HDLBP-243ENST00000488923 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 LAGE3Q14657 143 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 ORMDL2Q53FV1 153 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 MUC21Q5SSG8 566 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 PRR9Q5T870 116 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 C10orf99Q6UWK7 81 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 Q6ZN92 141 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 POM121L12Q8N7R1 296 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 IFI27L1Q96BM0 104 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 DUX5Q96PT3 197 aa4.95□□□□□ -1.62
HDLBP-243ENST00000488923 SPAG8Q99932 426 aaPredicted RBP4.95□□□□□ -1.62
HDLBP-243ENST00000488923 IGHV1OR15-1A0A075B7D0 117 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 A0A096LNJ9 63 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 A8MTW9 85 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 F6UB75 175 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 NCR2O95944 276 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 CD7P09564 240 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
HDLBP-243ENST00000488923 IGLL1P15814 213 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 SRD5A1P18405 259 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 TFPI2P48307 235 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 KIR3DS1Q14943 382 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 KHDC1LQ5JSQ8 128 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 PIK3CD-AS1Q5SR53 167 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 SLC25A34Q6PIV7 304 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 Q6ZSV7 163 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 NRACQ8N912 160 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 KLHL30-AS1Q8NEE0 82 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 OR11H1Q8NG94 326 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 SMIM2Q9BVW6 85 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 ZMAT4Q9H898 229 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 YAE1D1Q9NRH1 226 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 GOLT1BQ9Y3E0 138 aa4.94□□□□□ -1.62
HDLBP-243ENST00000488923 TSSC4Q9Y5U2 329 aaPredicted RBP4.94□□□□□ -1.62
HDLBP-243ENST00000488923 SPTAN1Q13813 2472 aaKnown RBP4.94□□□□□ -1.62
HDLBP-243ENST00000488923 MYO18BQ8IUG5 2567 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 IGLV2-18A0A075B6J9 118 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 TRAV12-3A0A0B4J271 114 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 SMKR1H3BMG3 65 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 NDUFA7O95182 113 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 HLA-DRB4P13762 266 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 SLURP1P55000 103 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 SUMO2P61956 95 aaKnown RBP4.93□□□□□ -1.62
HDLBP-243ENST00000488923 COL5A1-AS1Q5SY13 56 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 ATOH7Q8N100 152 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 PTH2Q96A98 100 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 C9orf85Q96MD7 179 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 LINC00467Q9BRT7 94 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 SNHG12Q9BXW3 62 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 TIMM8BQ9Y5J9 83 aaPredicted RBP4.93□□□□□ -1.62
HDLBP-243ENST00000488923 HLA-DRB4X5D2U9 266 aa4.93□□□□□ -1.62
HDLBP-243ENST00000488923 IGHV3-16A0A0C4DH30 117 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 TRBV6-5A0A0K0K1A5 114 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 H7C1H1 209 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 GNRH2O43555 120 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 PRSS1P07477 247 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 MGPP08493 103 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 DEFB131AP59861 70 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 FHL3Q13643 280 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 DEFB114Q30KQ6 69 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 PRR31Q5SQ13 230 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 AMTNQ6UX39 209 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 C12orf54Q6X4T0 127 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 LINC00173Q6ZV60 143 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 C14orf178Q8N769 122 aaPredicted RBP4.92□□□□□ -1.62
HDLBP-243ENST00000488923 TMEM158Q8WZ71 300 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 RAX2Q96IS3 184 aa4.92□□□□□ -1.62
HDLBP-243ENST00000488923 SPG11Q96JI7 2443 aa4.91□□□□□ -1.62
HDLBP-243ENST00000488923 TRAV12-1A0A0B4J245 112 aa4.91□□□□□ -1.62
HDLBP-243ENST00000488923 H3BMM0 161 aa4.91□□□□□ -1.62
HDLBP-243ENST00000488923 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.91□□□□□ -1.62
HDLBP-243ENST00000488923 CCL24O00175 119 aa4.91□□□□□ -1.62
HDLBP-243ENST00000488923 VCYO14598 125 aa4.91□□□□□ -1.62
HDLBP-243ENST00000488923 SIVA1O15304 175 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms