RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 HIST1H2BOP23527 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST1H2BBP33778 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST1H2BDP58876 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST1H2BCP62807 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 ZNF415Q09FC8 603 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST2H2BEQ16778 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 KIAA1644Q3SXP7 199 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.05□□□□□ -1.6
PDAP1-203ENST00000488214 ZNF575Q86XF7 245 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 LURAP1LQ8IV03 231 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 TMEM256Q8N2U0 113 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST1H2BHQ93079 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 AP1S3Q96PC3 154 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST1H2BNQ99877 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 HIST1H2BMQ99879 126 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 MDFICQ9P1T7 246 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 GOLT1BQ9Y3E0 138 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
PDAP1-203ENST00000488214 LOC102724200A0A096LPH7 203 aaPredicted RBP5.04□□□□□ -1.6
PDAP1-203ENST00000488214 G3V4G9 280 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 PRM2P04554 102 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 S100A6P06703 90 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 GIG44P09565 113 aaPredicted RBP5.04□□□□□ -1.6
PDAP1-203ENST00000488214 NTF3P20783 257 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 SRIP30626 198 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 KRTAP10-11P60412 298 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 DNLZQ5SXM8 178 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 SMIM15Q7Z3B0 74 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 AMN1Q8IY45 258 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 C1orf158Q8N1D5 194 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 GATD1Q8NB37 220 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 SYT8Q8NBV8 401 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 C9orf85Q96MD7 179 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 SCRT2Q9NQ03 307 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 MSRB1Q9NZV6 116 aa5.04□□□□□ -1.6
PDAP1-203ENST00000488214 NXPH4O95158 308 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 NCR2O95944 276 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 MGPP08493 103 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 IGHV4-30-4P0DP06 118 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 APOC4P55056 127 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 NDUFA6P56556 154 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 EGFEM1PQ0D2K5 195 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 ZNF493Q6ZR52 646 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 RCHY1Q96PM5 261 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 LINC00467Q9BRT7 94 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 TMEM191AQ9H0A3 160 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 CSTL1Q9H114 145 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 NACAE9PAV3 2078 aa5.03□□□□□ -1.6
PDAP1-203ENST00000488214 IGHV4-4A0A075B6R2 117 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 D6R8Y8 96 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 SMKR1H3BMG3 65 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 SMIM17P0DL12 118 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 EVI2AP22794 236 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 RIPPLY3P57055 190 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 IQCJQ1A5X6 159 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 DEFB135Q30KP9 77 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 MRPL51Q4U2R6 128 aaKnown RBP5.02□□□□□ -1.61
PDAP1-203ENST00000488214 SAMD5Q5TGI4 173 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 FAM74A4Q5TZK3 123 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 FAM104BQ5XKR9 115 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 C11orf72Q8NBR9 251 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 TMEM263Q8WUH6 116 aaKnown RBP5.02□□□□□ -1.61
PDAP1-203ENST00000488214 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 GSN-AS1Q9NRJ2 163 aa5.02□□□□□ -1.61
PDAP1-203ENST00000488214 MRPL16Q9NX20 251 aaKnown RBP5.02□□□□□ -1.61
PDAP1-203ENST00000488214 ZMAT5Q9UDW3 170 aaKnown RBP5.02□□□□□ -1.61
PDAP1-203ENST00000488214 A0A087WWL8 130 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 KIR2DL5BA0A0G2JN68 375 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 KIR2DL5BA0A0G2JPC4 375 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 M0R2P5 195 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 AZU1P20160 251 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 ZNF56Q15929 161 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 RRN3P1Q2M238 152 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 ZNF876PQ49A33 203 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 ZNF705AQ6ZN79 300 aaPredicted RBP5.01□□□□□ -1.61
PDAP1-203ENST00000488214 BAGE3Q86Y29 109 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 KIR2DL5AQ8N109 375 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 C14orf178Q8N769 122 aaPredicted RBP5.01□□□□□ -1.61
PDAP1-203ENST00000488214 CSNK1G2-AS1Q8NCQ2 148 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 KIR2DL5BQ8NHK3 375 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 IL17DQ8TAD2 202 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 RNASE8Q8TDE3 154 aaKnown RBP5.01□□□□□ -1.61
PDAP1-203ENST00000488214 C16orf74Q96GX8 76 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 DPH3P1Q9H4G8 78 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 JPT2Q9H910 190 aa5.01□□□□□ -1.61
PDAP1-203ENST00000488214 TRGV1A0A0A0MS02 117 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 TRAV26-2A0A0B4J265 109 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 CKS2P33552 79 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 SNRPEP62304 92 aaKnown RBP5□□□□□ -1.61
PDAP1-203ENST00000488214 PDZD11Q5EBL8 140 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 RNASEKQ6P5S7 137 aaKnown RBP5□□□□□ -1.61
PDAP1-203ENST00000488214 ORMDL3Q8N138 153 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 C18orf32Q8TCD1 76 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 RNF185Q96GF1 192 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 PRELID3AQ96N28 172 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 ALKBH7Q9BT30 221 aaPredicted RBP5□□□□□ -1.61
PDAP1-203ENST00000488214 SPXQ9BT56 116 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 DNAH3Q8TD57 4116 aa5□□□□□ -1.61
PDAP1-203ENST00000488214 C5orf52A6NGY3 159 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms