RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CD7P09564 240 aa6.93□□□□□ -1.3
SF3B1-211ENST00000487698 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
SF3B1-211ENST00000487698 INSL3P51460 131 aa6.93□□□□□ -1.3
SF3B1-211ENST00000487698 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
SF3B1-211ENST00000487698 BAGE3Q86Y29 109 aa6.93□□□□□ -1.3
SF3B1-211ENST00000487698 RNF185Q96GF1 192 aa6.93□□□□□ -1.3
SF3B1-211ENST00000487698 IGHV3-16A0A0C4DH30 117 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 FABP4P15090 132 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 S100A2P29034 98 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
SF3B1-211ENST00000487698 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 C9orf85Q96MD7 179 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 C9orf66Q5T8R8 295 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 PRIMA1Q86XR5 153 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 STHQ8IWL8 128 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 Q8N1Y9 231 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 C20orf144Q9BQM9 153 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 PHLDA3Q9Y5J5 127 aa6.92□□□□□ -1.3
SF3B1-211ENST00000487698 TIMM8BQ9Y5J9 83 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-211ENST00000487698 STAB1Q9NY15 2570 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 D6R8Y8 96 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 SPRY2O43597 315 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 RAB4AP20338 218 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 EVI2AP22794 236 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 URB1-AS1Q96HZ7 61 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 LINC00467Q9BRT7 94 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 WFDC10AQ9H1F0 79 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 FBN1P35555 2871 aaKnown RBP6.91□□□□□ -1.3
SF3B1-211ENST00000487698 M0R381 172 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 INSP01308 110 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 ORMDL3Q8N138 153 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 WFDC9Q8NEX5 89 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 PACRGQ96M98 296 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-211ENST00000487698 ZNF747Q9BV97 191 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 MDFICQ9P1T7 246 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 TRRAPQ9Y4A5 3859 aa6.91□□□□□ -1.3
SF3B1-211ENST00000487698 TRGV11A0A075B6L2 103 aa6.9□□□□□ -1.3
SF3B1-211ENST00000487698 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.3
SF3B1-211ENST00000487698 WIPF1O43516 503 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 PPBPP02775 128 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 SMIM15Q7Z3B0 74 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 LINC00518Q8N0U6 118 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 PRELID3AQ96N28 172 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 CBY3A6NI87 242 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 SMKR1H3BMG3 65 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 GIG44P09565 113 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-211ENST00000487698 SMIM6P0DI80 62 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 CKS2P33552 79 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 NUTF2P61970 127 aaKnown RBP6.89□□□□□ -1.31
SF3B1-211ENST00000487698 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 MCRIP2Q9BUT9 160 aaKnown RBP6.89□□□□□ -1.31
SF3B1-211ENST00000487698 XCL2Q9UBD3 114 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 LAMTOR2Q9Y2Q5 125 aa6.89□□□□□ -1.31
SF3B1-211ENST00000487698 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 NCR2O95944 276 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 NPYP01303 97 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 NIT1Q86X76 327 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 C1orf158Q8N1D5 194 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 DPH3P1Q9H4G8 78 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 LINC00315P59091 139 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 RNASEKQ6P5S7 137 aaKnown RBP6.88□□□□□ -1.31
SF3B1-211ENST00000487698 POM121L12Q8N7R1 296 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 C11orf72Q8NBR9 251 aa6.88□□□□□ -1.31
SF3B1-211ENST00000487698 CHCHD1Q96BP2 118 aaKnown RBP6.88□□□□□ -1.31
SF3B1-211ENST00000487698 NACAE9PAV3 2078 aa6.87□□□□□ -1.31
SF3B1-211ENST00000487698 PYY3Q5JQD4 70 aa6.87□□□□□ -1.31
SF3B1-211ENST00000487698 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
SF3B1-211ENST00000487698 MRAP2Q96G30 205 aa6.87□□□□□ -1.31
SF3B1-211ENST00000487698 SAMD10Q9BYL1 202 aa6.87□□□□□ -1.31
SF3B1-211ENST00000487698 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
SF3B1-211ENST00000487698 HSBP1O75506 76 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 PRM2P04554 102 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 LINC00614P0C842 121 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 PMCHP20382 165 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 AMTP48728 403 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 MORN3Q6PF18 240 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-211ENST00000487698 GTSCR1Q86UQ5 136 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 DEFB125Q8N687 156 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 NRACQ8N912 160 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 SYT8Q8NBV8 401 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 LINC01587Q99440 93 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 GSN-AS1Q9NRJ2 163 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 TRAV26-2A0A0B4J265 109 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 TNFRSF6BO95407 300 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 IGLL1P15814 213 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 GATA1P15976 413 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-211ENST00000487698 ZNF415Q09FC8 603 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 SHISA2Q6UWI4 295 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 Q6ZWC4 215 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 FAM19A2Q8N3H0 131 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 CSNK1G2-AS1Q8NCQ2 148 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 PTH2Q96A98 100 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 C12orf57Q99622 126 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 JPT2Q9H910 190 aa6.86□□□□□ -1.31
SF3B1-211ENST00000487698 HTN1P15515 57 aa6.85□□□□□ -1.31
SF3B1-211ENST00000487698 RPL35AP18077 110 aaKnown RBP6.85□□□□□ -1.31
SF3B1-211ENST00000487698 IFI27P40305 119 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-211ENST00000487698 PIK3CD-AS1Q5SR53 167 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms