RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 NUDT11Q96G61 164 aa10.4□□□□□ -0.74
APH1A-208ENST00000486720 LINC00862A6NCI5 91 aa10.39□□□□□ -0.75
APH1A-208ENST00000486720 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
APH1A-208ENST00000486720 ZNF876PQ49A33 203 aa10.39□□□□□ -0.75
APH1A-208ENST00000486720 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
APH1A-208ENST00000486720 COMMD7Q86VX2 200 aa10.39□□□□□ -0.75
APH1A-208ENST00000486720 SYT8Q8NBV8 401 aa10.39□□□□□ -0.75
APH1A-208ENST00000486720 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
APH1A-208ENST00000486720 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
APH1A-208ENST00000486720 GATCO43716 136 aaKnown RBP10.38□□□□□ -0.75
APH1A-208ENST00000486720 HTN3P15516 51 aa10.38□□□□□ -0.75
APH1A-208ENST00000486720 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
APH1A-208ENST00000486720 CASC10Q5T4H9 136 aa10.38□□□□□ -0.75
APH1A-208ENST00000486720 FAM210BQ96KR6 192 aa10.38□□□□□ -0.75
APH1A-208ENST00000486720 RNASE7Q9H1E1 156 aaKnown RBP10.38□□□□□ -0.75
APH1A-208ENST00000486720 SCRT2Q9NQ03 307 aa10.38□□□□□ -0.75
APH1A-208ENST00000486720 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
APH1A-208ENST00000486720 ADIRFQ15847 76 aa10.37□□□□□ -0.75
APH1A-208ENST00000486720 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
APH1A-208ENST00000486720 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
APH1A-208ENST00000486720 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
APH1A-208ENST00000486720 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
APH1A-208ENST00000486720 TRAV4A0A0B4J268 109 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 A0A1W2PPQ1 181 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 F5H768 121 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 SNAI2O43623 268 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 CIDEAO60543 219 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 TCTAP57738 103 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 CT83Q5H943 113 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 ISOC2Q96AB3 205 aa10.36□□□□□ -0.75
APH1A-208ENST00000486720 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
APH1A-208ENST00000486720 A8MWL6 223 aa10.35□□□□□ -0.75
APH1A-208ENST00000486720 A8MWV9 139 aa10.35□□□□□ -0.75
APH1A-208ENST00000486720 PNRC1Q12796 327 aaPredicted RBP10.35□□□□□ -0.75
APH1A-208ENST00000486720 SLAQ13239 276 aa10.35□□□□□ -0.75
APH1A-208ENST00000486720 OR4C5Q8NGB2 326 aa10.35□□□□□ -0.75
APH1A-208ENST00000486720 TMEM218A2RU14 115 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 IGLL5B9A064 214 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 F2Z2F3 143 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 M0R381 172 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 RS1O15537 224 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 GZMBP10144 247 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
APH1A-208ENST00000486720 IGHV3-53P01767 116 aa10.33□□□□□ -0.76
APH1A-208ENST00000486720 CACNG7P62955 275 aa10.33□□□□□ -0.76
APH1A-208ENST00000486720 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
APH1A-208ENST00000486720 OR10G8Q8NGN5 311 aa10.33□□□□□ -0.76
APH1A-208ENST00000486720 TPPP3Q9BW30 176 aa10.33□□□□□ -0.76
APH1A-208ENST00000486720 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 TRGV4A0A0C4DH28 118 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 F8W036 122 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 NXPH4O95158 308 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 HOXA5P20719 270 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 CFAP126Q5VTH2 177 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 POM121L12Q8N7R1 296 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 OR10AG1Q8NH19 301 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 ZNF479Q96JC4 524 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 GFRA4Q9GZZ7 299 aa10.32□□□□□ -0.76
APH1A-208ENST00000486720 FAM231BA6NCW3 169 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 H3BNG1 76 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 RHODO00212 210 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 CTRLP40313 264 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 FHL2Q14192 279 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 WDR73Q6P4I2 378 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 TMEM88Q6PEY1 159 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 ZFP2Q6ZN57 461 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 TSKUQ8WUA8 353 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 PRO0255Q9UI72 69 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 V9GYV3 84 aa10.31□□□□□ -0.76
APH1A-208ENST00000486720 PPP1R2P9O14990 202 aa10.3□□□□□ -0.76
APH1A-208ENST00000486720 FOXA3P55318 350 aaPredicted RBP10.3□□□□□ -0.76
APH1A-208ENST00000486720 LYZL1Q6UWQ5 148 aa10.3□□□□□ -0.76
APH1A-208ENST00000486720 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
APH1A-208ENST00000486720 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
APH1A-208ENST00000486720 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
APH1A-208ENST00000486720 BORCS7Q96B45 105 aa10.29□□□□□ -0.76
APH1A-208ENST00000486720 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
APH1A-208ENST00000486720 CNFNQ9BYD5 112 aa10.29□□□□□ -0.76
APH1A-208ENST00000486720 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
APH1A-208ENST00000486720 MUC21A0A0G2JKD1 596 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 MUC21A0A140T8X8 626 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 PAX4O43316 350 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 MT-ND4LP03901 98 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 TRGC1P0CF51 173 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 ADCYAP1P18509 176 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 CRYBA4P53673 196 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 ANAPC16Q96DE5 110 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 MUC4Q99102 2169 aa10.28□□□□□ -0.76
APH1A-208ENST00000486720 A0A0J9YY99 117 aa10.27□□□□□ -0.77
APH1A-208ENST00000486720 HIGD1CA8MV81 97 aa10.27□□□□□ -0.77
APH1A-208ENST00000486720 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
APH1A-208ENST00000486720 GATA1P15976 413 aaPredicted RBP10.27□□□□□ -0.77
APH1A-208ENST00000486720 SSTP61278 116 aa10.27□□□□□ -0.77
APH1A-208ENST00000486720 FAM74A4Q5TZK3 123 aa10.27□□□□□ -0.77
APH1A-208ENST00000486720 JPT2Q9H910 190 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms