RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 GRIFINA4D1Z8 144 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 B4DEV8 164 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 H3BVH4 76 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 RS1O15537 224 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 ASIPP42127 132 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 CFAP126Q5VTH2 177 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
MSH5-216ENST00000484309 PKHD1P08F94 4074 aa8.41□□□□□ -1.06
MSH5-216ENST00000484309 SIVA1O15304 175 aa8.41□□□□□ -1.06
MSH5-216ENST00000484309 LTAP01374 205 aa8.41□□□□□ -1.06
MSH5-216ENST00000484309 GATA1P15976 413 aaPredicted RBP8.41□□□□□ -1.06
MSH5-216ENST00000484309 CCL20P78556 96 aa8.41□□□□□ -1.06
MSH5-216ENST00000484309 ZFP30Q9Y2G7 519 aa8.41□□□□□ -1.06
MSH5-216ENST00000484309 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 KRBOX1C9JBD0 128 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 FAM162BQ5T6X4 162 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 ZNF575Q86XF7 245 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 TCEAL7Q9BRU2 100 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 JPT2Q9H910 190 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 GNG13Q9P2W3 67 aa8.4□□□□□ -1.06
MSH5-216ENST00000484309 DNAH11Q96DT5 4516 aa8.4□□□□□ -1.07
MSH5-216ENST00000484309 C1QBP02746 253 aa8.39□□□□□ -1.07
MSH5-216ENST00000484309 LINC00315P59091 139 aa8.39□□□□□ -1.07
MSH5-216ENST00000484309 ZNF674Q2M3X9 581 aa8.39□□□□□ -1.07
MSH5-216ENST00000484309 TXNDC17Q9BRA2 123 aa8.39□□□□□ -1.07
MSH5-216ENST00000484309 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
MSH5-216ENST00000484309 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
MSH5-216ENST00000484309 DYNC1H1Q14204 4646 aaKnown RBP8.38□□□□□ -1.07
MSH5-216ENST00000484309 A0A1W2PPQ1 181 aa8.38□□□□□ -1.07
MSH5-216ENST00000484309 ARMS2P0C7Q2 107 aa8.38□□□□□ -1.07
MSH5-216ENST00000484309 RPL19P84098 196 aaKnown RBP8.38□□□□□ -1.07
MSH5-216ENST00000484309 COX8CQ7Z4L0 72 aa8.38□□□□□ -1.07
MSH5-216ENST00000484309 AKAP14Q86UN6 197 aa8.38□□□□□ -1.07
MSH5-216ENST00000484309 PARLQ9H300 379 aa8.38□□□□□ -1.07
MSH5-216ENST00000484309 IL36BQ9NZH7 164 aa8.38□□□□□ -1.07
MSH5-216ENST00000484309 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
MSH5-216ENST00000484309 KIAA1109Q2LD37 5005 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 SULT1A2P50226 295 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 RHOHQ15669 191 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 DMRTA1Q5VZB9 504 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 EIF5AL1Q6IS14 154 aaKnown RBP8.37□□□□□ -1.07
MSH5-216ENST00000484309 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 Q6ZSN1 163 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 PTH2Q96A98 100 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 PRADC1Q9BSG0 188 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 DERL1Q9BUN8 251 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 SAMD10Q9BYL1 202 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 MANBALQ9NQG1 85 aa8.37□□□□□ -1.07
MSH5-216ENST00000484309 TRBV6-4A0A1B0GX49 114 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 A8MWV9 139 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 M0R381 172 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 S100A9P06702 114 aaKnown RBP8.36□□□□□ -1.07
MSH5-216ENST00000484309 RAB5CP51148 216 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 FAM74A4Q5TZK3 123 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 SLC51BQ86UW2 128 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 C9orf62Q8N4C0 152 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 LY96Q9Y6Y9 160 aa8.36□□□□□ -1.07
MSH5-216ENST00000484309 HERC2O95714 4834 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 A0A087WWL8 130 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 TRAV1-1A0A0B4J248 108 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 GAGE12JA6NER3 117 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 CIDEAO60543 219 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 MGST1P10620 155 aaKnown RBP8.35□□□□□ -1.07
MSH5-216ENST00000484309 RPL35P42766 123 aaKnown RBP8.35□□□□□ -1.07
MSH5-216ENST00000484309 GAGE1Q13065 139 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 GAGE4Q13068 117 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 GAGE5Q13069 117 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 GAGE13Q4V321 117 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 DNLZQ5SXM8 178 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 BOLA1Q9Y3E2 137 aa8.35□□□□□ -1.07
MSH5-216ENST00000484309 TEX46H3BTG2 121 aa8.34□□□□□ -1.07
MSH5-216ENST00000484309 ZFP2Q6ZN57 461 aa8.34□□□□□ -1.07
MSH5-216ENST00000484309 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.07
MSH5-216ENST00000484309 SH2D6Q7Z4S9 175 aa8.34□□□□□ -1.07
MSH5-216ENST00000484309 C14orf178Q8N769 122 aaPredicted RBP8.34□□□□□ -1.07
MSH5-216ENST00000484309 MLST8Q9BVC4 326 aa8.34□□□□□ -1.07
MSH5-216ENST00000484309 Q9UF83 564 aa8.34□□□□□ -1.07
MSH5-216ENST00000484309 MUC21A0A0G2JKD1 596 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 MUC21A0A140T8X8 626 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 A0A1B0GVG6 124 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 RAB19A4D1S5 217 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 EVI2AP22794 236 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 CENPWQ5EE01 88 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 OR10J3Q5JRS4 329 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 UFSP1Q6NVU6 142 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 SPATA12Q7Z6I5 190 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 ATP6V0E2Q8NHE4 81 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 C11orf52Q96A22 123 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 SCRT2Q9NQ03 307 aa8.33□□□□□ -1.08
MSH5-216ENST00000484309 IFNA1P01562 189 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms