RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 VSIG2Q96IQ7 327 aa11.08□□□□□ -0.64
UPF3A-208ENST00000484246 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
UPF3A-208ENST00000484246 CIDEAO60543 219 aa11.07□□□□□ -0.64
UPF3A-208ENST00000484246 ORM1P02763 201 aa11.07□□□□□ -0.64
UPF3A-208ENST00000484246 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
UPF3A-208ENST00000484246 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
UPF3A-208ENST00000484246 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
UPF3A-208ENST00000484246 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
UPF3A-208ENST00000484246 IGLV2-8P01709 118 aa11.06□□□□□ -0.64
UPF3A-208ENST00000484246 MED14OSP0DP75 135 aa11.06□□□□□ -0.64
UPF3A-208ENST00000484246 CRYBA4P53673 196 aa11.06□□□□□ -0.64
UPF3A-208ENST00000484246 ZNF876PQ49A33 203 aa11.06□□□□□ -0.64
UPF3A-208ENST00000484246 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
UPF3A-208ENST00000484246 DNAH6Q9C0G6 4158 aa11.06□□□□□ -0.64
UPF3A-208ENST00000484246 TRBV20OR9-2A0A075B6H5 130 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 RBFOX3A6NFN3 312 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 M0R036 132 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 RS1O15537 224 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 NUDT3O95989 172 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 IGHV3-53P01767 116 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
UPF3A-208ENST00000484246 TEX261Q6UWH6 196 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 OR4C5Q8NGB2 326 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 MED9Q9NWA0 146 aa11.05□□□□□ -0.64
UPF3A-208ENST00000484246 HYDINQ4G0P3 5121 aa11.04□□□□□ -0.64
UPF3A-208ENST00000484246 A0A0J9YY99 117 aa11.04□□□□□ -0.64
UPF3A-208ENST00000484246 PGPEP1LA6NFU8 196 aa11.04□□□□□ -0.64
UPF3A-208ENST00000484246 C9JCJ5 164 aa11.04□□□□□ -0.64
UPF3A-208ENST00000484246 H3BVH4 76 aa11.04□□□□□ -0.64
UPF3A-208ENST00000484246 GNG4P50150 75 aa11.04□□□□□ -0.64
UPF3A-208ENST00000484246 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
UPF3A-208ENST00000484246 A0A096LPF7 62 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 TRGV4A0A0C4DH28 118 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 PAX4O43316 350 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 SFTA3P0C7M3 94 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 CCL18P55774 89 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 CFAP126Q5VTH2 177 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
UPF3A-208ENST00000484246 KMT2AQ03164 3969 aa11.02□□□□□ -0.64
UPF3A-208ENST00000484246 MUC4Q99102 2169 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 RAB19A4D1S5 217 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 C19orf71A6NCJ1 209 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 A8MWV9 139 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 NXPH4O95158 308 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 ARMS2P0C7Q2 107 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 GATA1P15976 413 aaPredicted RBP11.02□□□□□ -0.65
UPF3A-208ENST00000484246 BIN3Q9NQY0 253 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 ICOSQ9Y6W8 199 aa11.02□□□□□ -0.65
UPF3A-208ENST00000484246 PRR27Q6MZM9 219 aa11.01□□□□□ -0.65
UPF3A-208ENST00000484246 ZFP2Q6ZN57 461 aa11.01□□□□□ -0.65
UPF3A-208ENST00000484246 SYT8Q8NBV8 401 aa11.01□□□□□ -0.65
UPF3A-208ENST00000484246 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
UPF3A-208ENST00000484246 SSBP4Q9BWG4 385 aaPredicted RBP11.01□□□□□ -0.65
UPF3A-208ENST00000484246 PARLQ9H300 379 aa11.01□□□□□ -0.65
UPF3A-208ENST00000484246 TMSB15BA0A087X1C1 80 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 GRIFINA4D1Z8 144 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 SNAI2O43623 268 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 OR5AL1P0C617 328 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 RPL19P84098 196 aaKnown RBP11□□□□□ -0.65
UPF3A-208ENST00000484246 MRPL23Q16540 153 aaKnown RBP11□□□□□ -0.65
UPF3A-208ENST00000484246 TOR2AQ5JU69 321 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 ZFP82Q8N141 532 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 LINC00588Q9Y4M8 146 aa11□□□□□ -0.65
UPF3A-208ENST00000484246 TRBV6-4A0A1B0GX49 114 aa10.99□□□□□ -0.65
UPF3A-208ENST00000484246 RHODO00212 210 aa10.99□□□□□ -0.65
UPF3A-208ENST00000484246 MGST1P10620 155 aaKnown RBP10.99□□□□□ -0.65
UPF3A-208ENST00000484246 UFSP1Q6NVU6 142 aa10.99□□□□□ -0.65
UPF3A-208ENST00000484246 MRPS16Q9Y3D3 137 aaKnown RBP10.99□□□□□ -0.65
UPF3A-208ENST00000484246 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
UPF3A-208ENST00000484246 K7EQD1 137 aa10.98□□□□□ -0.65
UPF3A-208ENST00000484246 RPS20P60866 119 aaKnown RBP10.98□□□□□ -0.65
UPF3A-208ENST00000484246 ESRGQ1W209 222 aa10.98□□□□□ -0.65
UPF3A-208ENST00000484246 Q6ZR54 194 aa10.98□□□□□ -0.65
UPF3A-208ENST00000484246 LY96Q9Y6Y9 160 aa10.98□□□□□ -0.65
UPF3A-208ENST00000484246 RHOHQ15669 191 aa10.97□□□□□ -0.65
UPF3A-208ENST00000484246 SH2D6Q7Z4S9 175 aa10.97□□□□□ -0.65
UPF3A-208ENST00000484246 PCNPQ8WW12 178 aaKnown RBP10.97□□□□□ -0.65
UPF3A-208ENST00000484246 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
UPF3A-208ENST00000484246 SFRP2Q96HF1 295 aa10.97□□□□□ -0.65
UPF3A-208ENST00000484246 EIF5A2Q9GZV4 153 aaKnown RBP10.97□□□□□ -0.65
UPF3A-208ENST00000484246 P01737 135 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
UPF3A-208ENST00000484246 IGLC6P0CF74 106 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 GYPEP15421 78 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 SRIP30626 198 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 NEGR1Q7Z3B1 354 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 SLC25A29Q8N8R3 303 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 OR2D3Q8NGH3 330 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 SMDT1Q9H4I9 107 aa10.96□□□□□ -0.65
UPF3A-208ENST00000484246 XKRY2A2RUG3 117 aa10.95□□□□□ -0.66
UPF3A-208ENST00000484246 K7EN84 100 aa10.95□□□□□ -0.66
UPF3A-208ENST00000484246 M0R381 172 aa10.95□□□□□ -0.66
UPF3A-208ENST00000484246 TIRAPP58753 221 aa10.95□□□□□ -0.66
UPF3A-208ENST00000484246 OR10AG1Q8NH19 301 aa10.95□□□□□ -0.66
UPF3A-208ENST00000484246 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
UPF3A-208ENST00000484246 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
UPF3A-208ENST00000484246 CRYGDP07320 174 aa10.94□□□□□ -0.66
UPF3A-208ENST00000484246 SAMD10Q9BYL1 202 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms