RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.76
CLK3-204ENST00000483723 IGHV1OR15-1A0A075B7D0 117 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 PF4P02776 101 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 NIT1Q86X76 327 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 ORMDL3Q8N138 153 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 C19orf73Q9NVV2 129 aa10.33□□□□□ -0.76
CLK3-204ENST00000483723 IGHV3-16A0A0C4DH30 117 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 D6R8Y8 96 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 PPBPP02775 128 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 CD7P09564 240 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 RBMY1A1P0DJD3 496 aaKnown RBP10.32□□□□□ -0.76
CLK3-204ENST00000483723 RBMY1CP0DJD4 496 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 EVI2AP22794 236 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 RBMY1FQ15415 496 aaKnown RBP10.32□□□□□ -0.76
CLK3-204ENST00000483723 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 TRPT1Q86TN4 253 aaKnown RBP10.32□□□□□ -0.76
CLK3-204ENST00000483723 C12orf57Q99622 126 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 C20orf144Q9BQM9 153 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 PHLDA3Q9Y5J5 127 aa10.32□□□□□ -0.76
CLK3-204ENST00000483723 FXYD7P58549 80 aa10.31□□□□□ -0.76
CLK3-204ENST00000483723 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
CLK3-204ENST00000483723 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
CLK3-204ENST00000483723 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
CLK3-204ENST00000483723 LINC00467Q9BRT7 94 aa10.31□□□□□ -0.76
CLK3-204ENST00000483723 MUC4Q99102 2169 aa10.31□□□□□ -0.76
CLK3-204ENST00000483723 JOSD1Q15040 202 aaPredicted RBP10.3□□□□□ -0.76
CLK3-204ENST00000483723 Q8N1Y9 231 aa10.3□□□□□ -0.76
CLK3-204ENST00000483723 LINC00614P0C842 121 aa10.3□□□□□ -0.76
CLK3-204ENST00000483723 CKS2P33552 79 aa10.3□□□□□ -0.76
CLK3-204ENST00000483723 INSL3P51460 131 aa10.3□□□□□ -0.76
CLK3-204ENST00000483723 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
CLK3-204ENST00000483723 LAMTOR2Q9Y2Q5 125 aa10.3□□□□□ -0.76
CLK3-204ENST00000483723 TIMM8BQ9Y5J9 83 aaPredicted RBP10.3□□□□□ -0.76
CLK3-204ENST00000483723 M0R381 172 aa10.29□□□□□ -0.76
CLK3-204ENST00000483723 SPRY2O43597 315 aa10.29□□□□□ -0.76
CLK3-204ENST00000483723 STHQ8IWL8 128 aa10.29□□□□□ -0.76
CLK3-204ENST00000483723 POM121L12Q8N7R1 296 aa10.29□□□□□ -0.76
CLK3-204ENST00000483723 SAMD10Q9BYL1 202 aa10.29□□□□□ -0.76
CLK3-204ENST00000483723 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
CLK3-204ENST00000483723 HSBP1O75506 76 aa10.28□□□□□ -0.76
CLK3-204ENST00000483723 AMTP48728 403 aa10.28□□□□□ -0.76
CLK3-204ENST00000483723 KIF25-AS1Q9Y6Z4 181 aa10.28□□□□□ -0.76
CLK3-204ENST00000483723 PRSS47A8MTI9 375 aa10.27□□□□□ -0.76
CLK3-204ENST00000483723 SMKR1H3BMG3 65 aa10.27□□□□□ -0.76
CLK3-204ENST00000483723 NPYP01303 97 aa10.27□□□□□ -0.76
CLK3-204ENST00000483723 C9orf66Q5T8R8 295 aa10.27□□□□□ -0.76
CLK3-204ENST00000483723 RNASEKQ6P5S7 137 aaKnown RBP10.27□□□□□ -0.76
CLK3-204ENST00000483723 Q6ZWC4 215 aa10.27□□□□□ -0.76
CLK3-204ENST00000483723 DEFB125Q8N687 156 aa10.27□□□□□ -0.76
CLK3-204ENST00000483723 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.76
CLK3-204ENST00000483723 GAS8-AS1O95177 125 aa10.27□□□□□ -0.77
CLK3-204ENST00000483723 PMCHP20382 165 aa10.27□□□□□ -0.77
CLK3-204ENST00000483723 LINC00315P59091 139 aa10.27□□□□□ -0.77
CLK3-204ENST00000483723 FAM19A2Q8N3H0 131 aa10.27□□□□□ -0.77
CLK3-204ENST00000483723 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
CLK3-204ENST00000483723 SPATA3Q8NHX4 192 aa10.27□□□□□ -0.77
CLK3-204ENST00000483723 MRAP2Q96G30 205 aa10.27□□□□□ -0.77
CLK3-204ENST00000483723 NCR2O95944 276 aa10.26□□□□□ -0.77
CLK3-204ENST00000483723 INSP01308 110 aa10.26□□□□□ -0.77
CLK3-204ENST00000483723 KRTAP24-1Q3LI83 254 aa10.26□□□□□ -0.77
CLK3-204ENST00000483723 GSN-AS1Q9NRJ2 163 aa10.26□□□□□ -0.77
CLK3-204ENST00000483723 LINC01546A6NGU7 62 aa10.25□□□□□ -0.77
CLK3-204ENST00000483723 TNFRSF6BO95407 300 aa10.25□□□□□ -0.77
CLK3-204ENST00000483723 IFI27P40305 119 aaPredicted RBP10.25□□□□□ -0.77
CLK3-204ENST00000483723 C14orf178Q8N769 122 aaPredicted RBP10.25□□□□□ -0.77
CLK3-204ENST00000483723 NRACQ8N912 160 aa10.25□□□□□ -0.77
CLK3-204ENST00000483723 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
CLK3-204ENST00000483723 PTH2Q96A98 100 aa10.25□□□□□ -0.77
CLK3-204ENST00000483723 AP1S3Q96PC3 154 aa10.25□□□□□ -0.77
CLK3-204ENST00000483723 CBY3A6NI87 242 aa10.24□□□□□ -0.77
CLK3-204ENST00000483723 GATA1P15976 413 aaPredicted RBP10.24□□□□□ -0.77
CLK3-204ENST00000483723 NUTF2P61970 127 aaKnown RBP10.24□□□□□ -0.77
CLK3-204ENST00000483723 C1orf158Q8N1D5 194 aa10.24□□□□□ -0.77
CLK3-204ENST00000483723 GIG44P09565 113 aaPredicted RBP10.24□□□□□ -0.77
CLK3-204ENST00000483723 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
CLK3-204ENST00000483723 LINC01587Q99440 93 aa10.24□□□□□ -0.77
CLK3-204ENST00000483723 MAP1LC3AQ9H492 121 aa10.24□□□□□ -0.77
CLK3-204ENST00000483723 NIT2Q9NQR4 276 aa10.24□□□□□ -0.77
CLK3-204ENST00000483723 AP5S1Q9NUS5 200 aa10.24□□□□□ -0.77
CLK3-204ENST00000483723 IGHV1-24A0A0C4DH33 117 aa10.23□□□□□ -0.77
CLK3-204ENST00000483723 PIK3CD-AS1Q5SR53 167 aa10.23□□□□□ -0.77
CLK3-204ENST00000483723 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
CLK3-204ENST00000483723 FA2HQ7L5A8 372 aa10.23□□□□□ -0.77
CLK3-204ENST00000483723 MCRIP2Q9BUT9 160 aaKnown RBP10.23□□□□□ -0.77
CLK3-204ENST00000483723 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
CLK3-204ENST00000483723 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
CLK3-204ENST00000483723 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
CLK3-204ENST00000483723 LOC389332A0A1B0GUA5 103 aa10.22□□□□□ -0.77
CLK3-204ENST00000483723 WIPF1O43516 503 aa10.22□□□□□ -0.77
CLK3-204ENST00000483723 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
CLK3-204ENST00000483723 WFDC10AQ9H1F0 79 aa10.22□□□□□ -0.77
CLK3-204ENST00000483723 JPT2Q9H910 190 aa10.22□□□□□ -0.77
CLK3-204ENST00000483723 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.77
CLK3-204ENST00000483723 NXT2Q9NPJ8 142 aaKnown RBP10.21□□□□□ -0.77
CLK3-204ENST00000483723 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.78
CLK3-204ENST00000483723 PRM2P04554 102 aa10.21□□□□□ -0.78
CLK3-204ENST00000483723 CRYGDP07320 174 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms