RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 BRWD1Q9NSI6 2320 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 LAMB4A4D0S4 1761 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 TCRBV3S1A0A5B6 114 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 TMEM30CPA0ZSE6 113 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 RBAKDNA6NC62 111 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 H3BRM9 83 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 J3QRE1 110 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 DNAL4O96015 105 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 COX7CP15954 63 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 UBA52P62987 128 aaKnown RBP1.58□□□□□ -2.16
CLCC1-209ENST00000482889 FAM74A1Q5RGS3 127 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 LYPD5Q6UWN5 251 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.58□□□□□ -2.16
CLCC1-209ENST00000482889 KRTAP13-1Q8IUC0 172 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 PATE1Q8WXA2 126 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 SPANXDQ9BXN6 97 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 WDR97A6NE52 1622 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 LRP5O75197 1615 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 RP1P56715 2156 aa1.58□□□□□ -2.16
CLCC1-209ENST00000482889 CECR2Q9BXF3 1484 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 COL11A1P12107 1806 aaPredicted RBP1.57□□□□□ -2.16
CLCC1-209ENST00000482889 A6NIN4 97 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 PPYP01298 95 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 MT-ATP8P03928 68 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 RHOHQ15669 191 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 SLC48A1Q6P1K1 146 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 COA5Q86WW8 74 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 OR10AG1Q8NH19 301 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 C10orf82Q8WW14 230 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 PRO1933Q9H354 126 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 DPH3P1Q9H4G8 78 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 COL4A5P29400 1685 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 COL5A3P25940 1745 aaPredicted RBP1.57□□□□□ -2.16
CLCC1-209ENST00000482889 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.57□□□□□ -2.16
CLCC1-209ENST00000482889 KIDINS220Q9ULH0 1771 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 FREM1Q5H8C1 2179 aa1.57□□□□□ -2.16
CLCC1-209ENST00000482889 RAPGEF2Q9Y4G8 1499 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 TRBV6-5A0A0K0K1A5 114 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 TMEM262E9PQX1 116 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 RNASE3P12724 160 aaKnown RBP1.56□□□□□ -2.16
CLCC1-209ENST00000482889 SPRNQ5BIV9 151 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 C9orf116Q5BN46 136 aaPredicted RBP1.56□□□□□ -2.16
CLCC1-209ENST00000482889 C10orf55Q5SWW7 151 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 IFI27L1Q96BM0 104 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 AQP10Q96PS8 301 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 WFDC10AQ9H1F0 79 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 TMEM106BQ9NUM4 274 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 MRPL35Q9NZE8 188 aaKnown RBP1.56□□□□□ -2.16
CLCC1-209ENST00000482889 MRPL36Q9P0J6 103 aaKnown RBP1.56□□□□□ -2.16
CLCC1-209ENST00000482889 KLK9Q9UKQ9 250 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 CASZ1Q86V15 1759 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 PCDH15Q96QU1 1955 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 SCN3AQ9NY46 2000 aa1.56□□□□□ -2.16
CLCC1-209ENST00000482889 NRKQ7Z2Y5 1582 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 RBBP6Q7Z6E9 1792 aaKnown RBP1.55□□□□□ -2.16
CLCC1-209ENST00000482889 TRAV23DV6A0A075B6W5 121 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 TRBV6-4A0A1B0GX49 114 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 CBLN1P23435 193 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 C12orf73Q69YU5 71 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 Q6ZRN7 208 aaPredicted RBP1.55□□□□□ -2.16
CLCC1-209ENST00000482889 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 SBSPONQ8IVN8 264 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 C9orf62Q8N4C0 152 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 C4orf3Q8WVX3 66 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 VAMP8Q9BV40 100 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 LINC00474Q9P2X8 69 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 ALPK3Q96L96 1907 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 RTTNQ86VV8 2226 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
CLCC1-209ENST00000482889 TRPM7Q96QT4 1865 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 CXorf51AA0A1B0GTR3 108 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 GNGT2O14610 69 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 IGHV3-33P01772 117 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 DEFB103AP81534 67 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 PPDPFLQ8WWR9 84 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 TSLPQ969D9 159 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 DPY30Q9C005 99 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 ATG5Q9H1Y0 275 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 AP4S1Q9Y587 144 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 V9GYS6 101 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 PTPRMP28827 1452 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 DISP1Q96F81 1524 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 SCRIBQ14160 1630 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 MUC4Q99102 2169 aa1.54□□□□□ -2.16
CLCC1-209ENST00000482889 IGKV3-7A0A075B6H7 116 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 TRAV2A0A0B4J234 112 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 TRAV12-3A0A0B4J271 114 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 UBE2L5PA0A1B0GUS4 154 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 NUPR2A6NF83 97 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 JMJD7-PLA2G4BH0Y9G9 81 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 MAPKBP1O60336 1514 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 IGLV3-1P01715 115 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 FREM3P0C091 2139 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 IL9P15248 144 aa1.53□□□□□ -2.16
CLCC1-209ENST00000482889 MYH9P35579 1960 aaKnown RBP1.53□□□□□ -2.16
CLCC1-209ENST00000482889 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
CLCC1-209ENST00000482889 DCDP81605 110 aaKnown RBP1.53□□□□□ -2.16
CLCC1-209ENST00000482889 CPSF1Q10570 1443 aaKnown RBP1.53□□□□□ -2.16
CLCC1-209ENST00000482889 MYLKQ15746 1914 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms