RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NPBQ8NG41 125 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 OR11H6Q8NGC7 330 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
VPS52-218ENST00000482399 FAM159AQ6UWV7 190 aa9.75□□□□□ -0.85
VPS52-218ENST00000482399 ZFP2Q6ZN57 461 aa9.75□□□□□ -0.85
VPS52-218ENST00000482399 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
VPS52-218ENST00000482399 DUSP14O95147 198 aaKnown RBP9.75□□□□□ -0.85
VPS52-218ENST00000482399 NPC2P61916 151 aa9.75□□□□□ -0.85
VPS52-218ENST00000482399 CDSNQ15517 529 aa9.75□□□□□ -0.85
VPS52-218ENST00000482399 TRAV2A0A0B4J234 112 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 RPL39P62891 51 aaKnown RBP9.74□□□□□ -0.85
VPS52-218ENST00000482399 KIR2DL4Q99706 377 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 SPANXB1Q9NS25 103 aaPredicted RBP9.74□□□□□ -0.85
VPS52-218ENST00000482399 MYO18BQ8IUG5 2567 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 TRAV12-3A0A0B4J271 114 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 TRBV12-3P01733 135 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 SPINK8P0C7L1 97 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 PRR9Q5T870 116 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 PLEKHB2Q96CS7 222 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 BPESC1Q9GZL8 116 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 DPH3P1Q9H4G8 78 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
VPS52-218ENST00000482399 C1orf122Q6ZSJ8 110 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 DLX4Q92988 240 aaPredicted RBP9.74□□□□□ -0.85
VPS52-218ENST00000482399 HIGD1BQ9P298 99 aa9.74□□□□□ -0.85
VPS52-218ENST00000482399 IGHV3-73A0A0B4J1V6 119 aa9.73□□□□□ -0.85
VPS52-218ENST00000482399 E9PLD3 99 aa9.73□□□□□ -0.85
VPS52-218ENST00000482399 M0R1W7 72 aa9.73□□□□□ -0.85
VPS52-218ENST00000482399 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
VPS52-218ENST00000482399 CCDC140Q96MF4 163 aa9.73□□□□□ -0.85
VPS52-218ENST00000482399 MSRB2Q9Y3D2 182 aa9.73□□□□□ -0.85
VPS52-218ENST00000482399 ADARB2-AS1A8MUL3 147 aa9.72□□□□□ -0.85
VPS52-218ENST00000482399 FAM110DQ8TAY7 271 aaPredicted RBP9.72□□□□□ -0.85
VPS52-218ENST00000482399 TRAV41A0A0B4J266 112 aa9.72□□□□□ -0.85
VPS52-218ENST00000482399 IGHV4-39P01824 125 aa9.72□□□□□ -0.85
VPS52-218ENST00000482399 TM2D2Q9BX73 214 aa9.72□□□□□ -0.85
VPS52-218ENST00000482399 TRAV12-2A0A075B6T6 113 aa9.72□□□□□ -0.85
VPS52-218ENST00000482399 LGALS1P09382 135 aaKnown RBP9.72□□□□□ -0.85
VPS52-218ENST00000482399 PSMG4Q5JS54 123 aa9.72□□□□□ -0.85
VPS52-218ENST00000482399 GATD1Q8NB37 220 aa9.72□□□□□ -0.85
VPS52-218ENST00000482399 ZNF688P0C7X2 276 aa9.71□□□□□ -0.85
VPS52-218ENST00000482399 NRACQ8N912 160 aa9.71□□□□□ -0.85
VPS52-218ENST00000482399 ATP6V0BQ99437 205 aa9.71□□□□□ -0.85
VPS52-218ENST00000482399 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
VPS52-218ENST00000482399 TRAV8-2A0A0B4J237 113 aa9.7□□□□□ -0.86
VPS52-218ENST00000482399 BAALCQ8WXS3 180 aa9.7□□□□□ -0.86
VPS52-218ENST00000482399 IGHV7-4-1A0A0J9YVY3 117 aa9.7□□□□□ -0.86
VPS52-218ENST00000482399 C20orf173Q96LM9 149 aa9.7□□□□□ -0.86
VPS52-218ENST00000482399 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
VPS52-218ENST00000482399 COL27A1Q8IZC6 1860 aaPredicted RBP9.69□□□□□ -0.86
VPS52-218ENST00000482399 CUBNO60494 3623 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 RASL10AQ92737 203 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
VPS52-218ENST00000482399 ZFYVE26Q68DK2 2539 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 C11orf86A6NJI1 115 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 C9JAW5 83 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
VPS52-218ENST00000482399 LYRM7Q5U5X0 104 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 DUX5Q96PT3 197 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 MINOS1Q5TGZ0 78 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 LY6G5BQ8NDX9 201 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 RHPN1-AS1Q9BWJ2 59 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 MINOS1-NBL1R4GNA1 71 aa9.69□□□□□ -0.86
VPS52-218ENST00000482399 A8MWV9 139 aa9.68□□□□□ -0.86
VPS52-218ENST00000482399 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
VPS52-218ENST00000482399 NPFFO15130 113 aa9.68□□□□□ -0.86
VPS52-218ENST00000482399 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
VPS52-218ENST00000482399 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
VPS52-218ENST00000482399 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
VPS52-218ENST00000482399 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
VPS52-218ENST00000482399 TRBV7-1A0A0A6YYK4 115 aa9.67□□□□□ -0.86
VPS52-218ENST00000482399 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
VPS52-218ENST00000482399 CLPSL1A2RUU4 121 aa9.67□□□□□ -0.86
VPS52-218ENST00000482399 ODF3BA8MYP8 253 aa9.67□□□□□ -0.86
VPS52-218ENST00000482399 MT-ATP8P03928 68 aa9.67□□□□□ -0.86
VPS52-218ENST00000482399 JMJD1CQ15652 2540 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 SPXQ9BT56 116 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 ZMAT4Q9H898 229 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 CELSR1Q9NYQ6 3014 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 H3BUX3 64 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 FOXI1Q12951 378 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 IGLV2-18A0A075B6J9 118 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 TAL2Q16559 108 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
VPS52-218ENST00000482399 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 KNCNA6PVL3 124 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 UBE2E1P51965 193 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 BLCAPP62952 87 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 LY6DQ14210 128 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 TSPAN13O95857 204 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 Q6ZS46 218 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 CNFNQ9BYD5 112 aa9.65□□□□□ -0.86
VPS52-218ENST00000482399 OVOL1O14753 267 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 TOMM6Q96B49 74 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 TRBV7-3A0A075B6L6 115 aa9.64□□□□□ -0.87
VPS52-218ENST00000482399 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms