RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 LYPD1Q8N2G4 141 aa7.82□□□□□ -1.16
COMMD4-203ENST00000480484 SS18L2Q9UHA2 77 aa7.82□□□□□ -1.16
COMMD4-203ENST00000480484 RNF183Q96D59 192 aa7.82□□□□□ -1.16
COMMD4-203ENST00000480484 C1QTNF4Q9BXJ3 329 aa7.82□□□□□ -1.16
COMMD4-203ENST00000480484 UFC1Q9Y3C8 167 aa7.82□□□□□ -1.16
COMMD4-203ENST00000480484 COX7A1P24310 79 aa7.82□□□□□ -1.16
COMMD4-203ENST00000480484 LOXP28300 417 aaPredicted RBP7.82□□□□□ -1.16
COMMD4-203ENST00000480484 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
COMMD4-203ENST00000480484 RNASE6Q93091 150 aaKnown RBP7.82□□□□□ -1.16
COMMD4-203ENST00000480484 OR11H12B2RN74 326 aa7.81□□□□□ -1.16
COMMD4-203ENST00000480484 OR11H1Q8NG94 326 aa7.81□□□□□ -1.16
COMMD4-203ENST00000480484 OR11H2Q8NH07 326 aa7.81□□□□□ -1.16
COMMD4-203ENST00000480484 LINC01560Q8TB33 94 aa7.81□□□□□ -1.16
COMMD4-203ENST00000480484 DYNLRB1Q9NP97 96 aa7.81□□□□□ -1.16
COMMD4-203ENST00000480484 LINC01549A6NIU2 74 aa7.81□□□□□ -1.16
COMMD4-203ENST00000480484 DTX2Q86UW9 622 aa7.81□□□□□ -1.16
COMMD4-203ENST00000480484 H3BVH4 76 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 TNFRSF13BO14836 293 aaPredicted RBP7.8□□□□□ -1.16
COMMD4-203ENST00000480484 PVRIGQ6DKI7 326 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 IGHV3OR16-13A0A075B7E8 117 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 IGHV3-74A0A0B4J1X5 117 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 K7EIM0 57 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 IGLC6P0CF74 106 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 IGHV1-8P0DP01 117 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
COMMD4-203ENST00000480484 TAL2Q16559 108 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 MORN3Q6PF18 240 aaPredicted RBP7.8□□□□□ -1.16
COMMD4-203ENST00000480484 ZFP2Q6ZN57 461 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 Q6ZUT4 128 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
COMMD4-203ENST00000480484 LINC01548A6NM66 108 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 MRPS12O15235 138 aaKnown RBP7.8□□□□□ -1.16
COMMD4-203ENST00000480484 TRGV3P03979 118 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 RPL13AP40429 203 aaKnown RBP7.8□□□□□ -1.16
COMMD4-203ENST00000480484 ERCC8Q13216 396 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 SCGB1D4Q6XE38 83 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 APRG1Q8IVJ8 170 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 ANAPC13Q9BS18 74 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 VPREB3Q9UKI3 123 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 CENPEQ02224 2701 aa7.8□□□□□ -1.16
COMMD4-203ENST00000480484 SPG11Q96JI7 2443 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 DLX6P56179 175 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 KLRD1Q13241 179 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 SRSF9Q13242 221 aaKnown RBP eCLIP7.79□□□□□ -1.16
COMMD4-203ENST00000480484 LAGE3Q14657 143 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 Q8N8P6 123 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 ZANQ9Y493 2812 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 A0A087WX48 190 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 HLA-DRB4P13762 266 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 KLRB1Q12918 225 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 CFAP126Q5VTH2 177 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 HLA-DRB4X5D2U9 266 aa7.79□□□□□ -1.16
COMMD4-203ENST00000480484 IGHV1-3A0A0C4DH29 117 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 IGHV3-66A0A0C4DH42 116 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 SMIM9A6NGZ8 99 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 FABP5P3A8MUU1 101 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 PLNP26678 52 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 ANXA2RQ3ZCQ2 193 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 TMEM155Q4W5P6 130 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
COMMD4-203ENST00000480484 B5MCH6 92 aa7.77□□□□□ -1.17
COMMD4-203ENST00000480484 PDE6HQ13956 83 aa7.77□□□□□ -1.17
COMMD4-203ENST00000480484 K7ENP7 123 aa7.77□□□□□ -1.17
COMMD4-203ENST00000480484 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
COMMD4-203ENST00000480484 SORL1Q92673 2214 aa7.77□□□□□ -1.17
COMMD4-203ENST00000480484 IGHV3-49A0A0A0MS15 119 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 ZNF815PA8K554 130 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 LGALS1P09382 135 aaKnown RBP7.76□□□□□ -1.17
COMMD4-203ENST00000480484 TMEM78Q5T7P6 136 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 ERG28Q9UKR5 140 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 KMT2BQ9UMN6 2715 aaPredicted RBP7.76□□□□□ -1.17
COMMD4-203ENST00000480484 H7C1H1 209 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 IGLV2-18A0A075B6J9 118 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 PRAC2D3DTV9 90 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 F8VRH5 84 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 RPL7P18124 248 aaKnown RBP7.76□□□□□ -1.17
COMMD4-203ENST00000480484 DYNAPQ8N1N2 210 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 SCGB3A1Q96QR1 104 aa7.76□□□□□ -1.17
COMMD4-203ENST00000480484 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 CARD19Q96LW7 228 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 PRADC1Q9BSG0 188 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 LINC01546A6NGU7 62 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 DEFB1P60022 68 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 SPANXN1Q5VSR9 72 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 KLHL30-AS1Q8NEE0 82 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 ATP6V0E2Q8NHE4 81 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 PPDPFLQ8WWR9 84 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
COMMD4-203ENST00000480484 BUB1B-PAK6H3BSN5 160 aa7.74□□□□□ -1.17
COMMD4-203ENST00000480484 HES1Q14469 280 aa7.74□□□□□ -1.17
COMMD4-203ENST00000480484 TEX29Q8N6K0 151 aa7.74□□□□□ -1.17
COMMD4-203ENST00000480484 PRORYQ9H606 182 aa7.74□□□□□ -1.17
COMMD4-203ENST00000480484 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.17
COMMD4-203ENST00000480484 SLC25A16P16260 332 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms