RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SFTA3P0C7M3 94 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 MGST1P10620 155 aaKnown RBP14.31□□□□□ -0.12
VARS-224ENST00000479051 CCL18P55774 89 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 FHL2Q14192 279 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 ZNF506Q5JVG8 444 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 SYT8Q8NBV8 401 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 DAZAP1Q96EP5 407 aaKnown RBP14.31□□□□□ -0.12
VARS-224ENST00000479051 ZNF479Q96JC4 524 aa14.31□□□□□ -0.12
VARS-224ENST00000479051 RAB19A4D1S5 217 aa14.3□□□□□ -0.12
VARS-224ENST00000479051 GRIFINA4D1Z8 144 aa14.3□□□□□ -0.12
VARS-224ENST00000479051 TMEM250H0YL14 139 aa14.3□□□□□ -0.12
VARS-224ENST00000479051 PIK3CD-AS1Q5SR53 167 aa14.3□□□□□ -0.12
VARS-224ENST00000479051 EIF5A2Q9GZV4 153 aaKnown RBP14.3□□□□□ -0.12
VARS-224ENST00000479051 RYR2Q92736 4967 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 PGPEP1LA6NFU8 196 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 CXCL1P09341 107 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 ARMS2P0C7Q2 107 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 CRYBA4P53673 196 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 FAM3BP58499 235 aaPredicted RBP14.29□□□□□ -0.12
VARS-224ENST00000479051 TOR2AQ5JU69 321 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 VSIG2Q96IQ7 327 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 PHLDA3Q9Y5J5 127 aa14.29□□□□□ -0.12
VARS-224ENST00000479051 PCNPQ8WW12 178 aaKnown RBP14.28□□□□□ -0.12
VARS-224ENST00000479051 ICOSQ9Y6W8 199 aa14.28□□□□□ -0.12
VARS-224ENST00000479051 RYR3Q15413 4870 aa14.27□□□□□ -0.12
VARS-224ENST00000479051 A8MWV9 139 aa14.27□□□□□ -0.13
VARS-224ENST00000479051 RS1O15537 224 aa14.27□□□□□ -0.13
VARS-224ENST00000479051 IGLV2-8P01709 118 aa14.27□□□□□ -0.13
VARS-224ENST00000479051 MED14OSP0DP75 135 aa14.27□□□□□ -0.13
VARS-224ENST00000479051 FAM210AQ96ND0 272 aa14.27□□□□□ -0.13
VARS-224ENST00000479051 NDUFS6O75380 124 aaKnown RBP14.26□□□□□ -0.13
VARS-224ENST00000479051 CFAP126Q5VTH2 177 aa14.26□□□□□ -0.13
VARS-224ENST00000479051 A0A096LPF7 62 aa14.25□□□□□ -0.13
VARS-224ENST00000479051 CEBPGP53567 150 aa14.25□□□□□ -0.13
VARS-224ENST00000479051 RPS20P60866 119 aaKnown RBP14.25□□□□□ -0.13
VARS-224ENST00000479051 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
VARS-224ENST00000479051 MRPL23Q16540 153 aaKnown RBP14.25□□□□□ -0.13
VARS-224ENST00000479051 ZFP82Q8N141 532 aa14.25□□□□□ -0.13
VARS-224ENST00000479051 PARLQ9H300 379 aa14.25□□□□□ -0.13
VARS-224ENST00000479051 TRBV20OR9-2A0A075B6H5 130 aa14.24□□□□□ -0.13
VARS-224ENST00000479051 XKRY2A2RUG3 117 aa14.24□□□□□ -0.13
VARS-224ENST00000479051 SCRT2Q9NQ03 307 aa14.24□□□□□ -0.13
VARS-224ENST00000479051 P01737 135 aa14.23□□□□□ -0.13
VARS-224ENST00000479051 GATA1P15976 413 aaPredicted RBP14.23□□□□□ -0.13
VARS-224ENST00000479051 VPS13DQ5THJ4 4388 aa14.23□□□□□ -0.13
VARS-224ENST00000479051 M0R381 172 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 RHODO00212 210 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 GYPEP15421 78 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 SRIP30626 198 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 DMRTA1Q5VZB9 504 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 ZFP2Q6ZN57 461 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 OR2D3Q8NGH3 330 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 PRADC1Q9BSG0 188 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 LINC00588Q9Y4M8 146 aa14.22□□□□□ -0.13
VARS-224ENST00000479051 HYDINQ4G0P3 5121 aa14.21□□□□□ -0.13
VARS-224ENST00000479051 IGHV3-73A0A0B4J1V6 119 aa14.21□□□□□ -0.13
VARS-224ENST00000479051 C19orf71A6NCJ1 209 aa14.21□□□□□ -0.13
VARS-224ENST00000479051 ZNF575Q86XF7 245 aa14.21□□□□□ -0.13
VARS-224ENST00000479051 TRBV6-4A0A1B0GX49 114 aa14.2□□□□□ -0.14
VARS-224ENST00000479051 K7EQD1 137 aa14.2□□□□□ -0.14
VARS-224ENST00000479051 OR5AL1P0C617 328 aa14.2□□□□□ -0.14
VARS-224ENST00000479051 RHOHQ15669 191 aa14.2□□□□□ -0.14
VARS-224ENST00000479051 NEGR1Q7Z3B1 354 aa14.2□□□□□ -0.14
VARS-224ENST00000479051 SH2D6Q7Z4S9 175 aa14.2□□□□□ -0.14
VARS-224ENST00000479051 OCC1Q8TAD7 63 aa14.2□□□□□ -0.14
VARS-224ENST00000479051 SNAI2O43623 268 aa14.19□□□□□ -0.14
VARS-224ENST00000479051 ESRGQ1W209 222 aa14.19□□□□□ -0.14
VARS-224ENST00000479051 SPANXN1Q5VSR9 72 aa14.19□□□□□ -0.14
VARS-224ENST00000479051 SLC25A29Q8N8R3 303 aa14.19□□□□□ -0.14
VARS-224ENST00000479051 SFRP2Q96HF1 295 aa14.19□□□□□ -0.14
VARS-224ENST00000479051 SMIM7Q9BQ49 75 aa14.19□□□□□ -0.14
VARS-224ENST00000479051 MRPS16Q9Y3D3 137 aaKnown RBP14.19□□□□□ -0.14
VARS-224ENST00000479051 NACAE9PAV3 2078 aa14.19□□□□□ -0.14
VARS-224ENST00000479051 IGLV2-18A0A075B6J9 118 aa14.18□□□□□ -0.14
VARS-224ENST00000479051 SRP19P09132 144 aaKnown RBP14.18□□□□□ -0.14
VARS-224ENST00000479051 RAB14P61106 215 aa14.18□□□□□ -0.14
VARS-224ENST00000479051 PEA15Q15121 130 aa14.18□□□□□ -0.14
VARS-224ENST00000479051 FAM74A4Q5TZK3 123 aa14.18□□□□□ -0.14
VARS-224ENST00000479051 SSBP4Q9BWG4 385 aaPredicted RBP14.18□□□□□ -0.14
VARS-224ENST00000479051 LY96Q9Y6Y9 160 aa14.18□□□□□ -0.14
VARS-224ENST00000479051 ZNF727A8MUV8 499 aa14.17□□□□□ -0.14
VARS-224ENST00000479051 FER1L6-AS1Q8NA97 138 aa14.17□□□□□ -0.14
VARS-224ENST00000479051 ZNRF2Q8NHG8 242 aa14.17□□□□□ -0.14
VARS-224ENST00000479051 UPK3BQ9BT76 320 aa14.17□□□□□ -0.14
VARS-224ENST00000479051 TPPP3Q9BW30 176 aa14.17□□□□□ -0.14
VARS-224ENST00000479051 SMDT1Q9H4I9 107 aa14.17□□□□□ -0.14
VARS-224ENST00000479051 JPT2Q9H910 190 aa14.17□□□□□ -0.14
VARS-224ENST00000479051 K7EN84 100 aa14.16□□□□□ -0.14
VARS-224ENST00000479051 M0R2N4 97 aa14.16□□□□□ -0.14
VARS-224ENST00000479051 NXPH4O95158 308 aa14.16□□□□□ -0.14
VARS-224ENST00000479051 NUDT10Q8NFP7 164 aa14.16□□□□□ -0.14
VARS-224ENST00000479051 OR10AG1Q8NH19 301 aa14.16□□□□□ -0.14
VARS-224ENST00000479051 NUDT11Q96G61 164 aa14.16□□□□□ -0.14
VARS-224ENST00000479051 RPP21Q9H633 154 aaKnown RBP14.16□□□□□ -0.14
VARS-224ENST00000479051 A0A087WWL8 130 aa14.15□□□□□ -0.14
VARS-224ENST00000479051 GZMBP10144 247 aa14.15□□□□□ -0.14
VARS-224ENST00000479051 SAMD10Q9BYL1 202 aa14.15□□□□□ -0.14
VARS-224ENST00000479051 LOC100131303A0A0U1RQF7 123 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 A0A1W2PPQ1 181 aa14.14□□□□□ -0.15
VARS-224ENST00000479051 F2Z2F3 143 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 288.1 ms