RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 FAM231CP0DMU5 169 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 DUX4L9Q6RFH8 374 aaPredicted RBP4.31□□□□□ -1.72
USF3-202ENST00000478658 A0A087WWL8 130 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 CXCL3P19876 107 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 C1orf195Q5TG92 126 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 CBLN3Q6UW01 205 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 FAM231DQ6ZW35 169 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 HIST3H2BBQ8N257 126 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 LINC00337Q8N6G1 96 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 XCL2Q9UBD3 114 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 Q6JHZ5 121 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 GTSF1Q8WW33 167 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 TRAV26-1A0A087WT03 109 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 SRRM5B3KS81 715 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 IGHV3-48P01763 117 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 CISD3P0C7P0 127 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 GP9P14770 177 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 HHLA3Q9XRX5 114 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 THSD7AQ9UPZ6 1657 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 BLCAPP62952 87 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 SERTAD4-AS1Q5TG53 156 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 LYPD6BQ8NI32 183 aa4.31□□□□□ -1.72
USF3-202ENST00000478658 WIPF2Q8TF74 440 aaPredicted RBP4.31□□□□□ -1.72
USF3-202ENST00000478658 H0YJW9 148 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 WDR83OSQ9Y284 106 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 IGKV1D-16P01601 117 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 IGKV1-16P04430 117 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 SAA4P35542 130 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 CFHR3Q02985 330 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 DEFB112Q30KQ8 113 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 C1QL2Q7Z5L3 287 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 FOXL2P58012 376 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 A0A0J9YXY3 114 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 C17orf98A8MV24 154 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 ACYP2P14621 99 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 EDN2P20800 178 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 MYCNOSP40205 109 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 UNQ6494/PRO21346Q6UXR6 183 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 VN1R4Q7Z5H5 301 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 NRXN2Q9P2S2 1712 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 HIST1H2BDP58876 126 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 HIST1H2BCP62807 126 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.3□□□□□ -1.72
USF3-202ENST00000478658 HIST1H2BHQ93079 126 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 HIST1H2BNQ99877 126 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 HIST1H2BMQ99879 126 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 LEAP2Q969E1 77 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 IGLV1-36A0A0B4J1U3 117 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 IGKV1-39P01597 117 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 IGKV1D-39P04432 117 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 FAM120AOSQ5T036 256 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 Q6ZRM9 215 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 TMEM219Q86XT9 240 aa4.3□□□□□ -1.72
USF3-202ENST00000478658 CNOT1A5YKK6 2376 aaKnown RBP4.3□□□□□ -1.72
USF3-202ENST00000478658 MUC21A0A0G2JKD1 596 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 MUC21A0A140T8X8 626 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 NUPR2A6NF83 97 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 Q6ZS49 121 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 Q8N976 141 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 FAM30AQ9NZY2 134 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 IGLC2P0DOY2 106 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 IGLC3P0DOY3 106 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 TMEM92Q6UXU6 159 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 A0A087WZ39 114 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 SPRY2O43597 315 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 IGHV1-2P23083 117 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 OCC1Q8TAD7 63 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 NOP10Q9NPE3 64 aaKnown RBP4.29□□□□□ -1.72
USF3-202ENST00000478658 IGLV3-32A0A0A0MS00 114 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 SPINK13Q1W4C9 94 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 SPACA3Q8IXA5 215 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 LINC01555Q8NAE3 123 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 SIRPDQ9H106 197 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 LOC101059948A0A1B0GTJ6 334 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 TMEM200BQ69YZ2 307 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 C11orf45Q8TAV5 145 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 Q96MF0 132 aa4.29□□□□□ -1.72
USF3-202ENST00000478658 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 A0A087WW49 117 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 PIFOQ8TCI5 191 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 PYGO1Q9Y3Y4 419 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 CT62P0C5K7 136 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 LINC00467Q9BRT7 94 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 SCRT1Q9BWW7 348 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 DKK1O94907 266 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 MIAQ16674 131 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 TREML4Q6UXN2 200 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 APRG1Q8IVJ8 170 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 RPP25LQ8N5L8 163 aaKnown RBP4.28□□□□□ -1.72
USF3-202ENST00000478658 HIGD2AQ9BW72 106 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 COL24A1Q17RW2 1714 aa4.28□□□□□ -1.72
USF3-202ENST00000478658 CTSGP08311 255 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 LOC107984640A0A0U1RRK4 108 aa4.27□□□□□ -1.73
USF3-202ENST00000478658 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms