RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 COX8CQ7Z4L0 72 aa15.66■□□□□ 0.1
TRAF4-211ENST00000478021 PCNPQ8WW12 178 aaKnown RBP15.66■□□□□ 0.1
TRAF4-211ENST00000478021 IGHV3-73A0A0B4J1V6 119 aa15.65■□□□□ 0.1
TRAF4-211ENST00000478021 GRIFINA4D1Z8 144 aa15.65■□□□□ 0.1
TRAF4-211ENST00000478021 SOHLH1Q5JUK2 328 aa15.65■□□□□ 0.1
TRAF4-211ENST00000478021 CFAP126Q5VTH2 177 aa15.65■□□□□ 0.1
TRAF4-211ENST00000478021 C9orf62Q8N4C0 152 aa15.65■□□□□ 0.1
TRAF4-211ENST00000478021 KRBOX1C9JBD0 128 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 H3BVH4 76 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 SRIP30626 198 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 ZNF674Q2M3X9 581 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 NEGR1Q7Z3B1 354 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 KRTAP1-5Q9BYS1 174 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 MANBALQ9NQG1 85 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 DNAH2Q9P225 4427 aa15.64■□□□□ 0.09
TRAF4-211ENST00000478021 TMSB15BA0A087X1C1 80 aa15.63■□□□□ 0.09
TRAF4-211ENST00000478021 TRAV1-1A0A0B4J248 108 aa15.63■□□□□ 0.09
TRAF4-211ENST00000478021 GATA1P15976 413 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-211ENST00000478021 LYPD5Q6UWN5 251 aa15.63■□□□□ 0.09
TRAF4-211ENST00000478021 DNAH17Q9UFH2 4485 aa15.62■□□□□ 0.09
TRAF4-211ENST00000478021 HECTD4Q9Y4D8 3996 aa15.62■□□□□ 0.09
TRAF4-211ENST00000478021 A0A1B0GVG6 124 aa15.62■□□□□ 0.09
TRAF4-211ENST00000478021 A0A1B0GVY2 172 aa15.62■□□□□ 0.09
TRAF4-211ENST00000478021 NXPH4O95158 308 aa15.62■□□□□ 0.09
TRAF4-211ENST00000478021 S100A9P06702 114 aaKnown RBP15.62■□□□□ 0.09
TRAF4-211ENST00000478021 C6orf223Q8N319 242 aa15.62■□□□□ 0.09
TRAF4-211ENST00000478021 PTH2Q96A98 100 aa15.62■□□□□ 0.09
TRAF4-211ENST00000478021 TEX46H3BTG2 121 aa15.61■□□□□ 0.09
TRAF4-211ENST00000478021 BAGE2Q86Y30 109 aa15.61■□□□□ 0.09
TRAF4-211ENST00000478021 IL36BQ9NZH7 164 aa15.61■□□□□ 0.09
TRAF4-211ENST00000478021 ARMS2P0C7Q2 107 aa15.6■□□□□ 0.09
TRAF4-211ENST00000478021 LINC01559Q495D7 138 aa15.6■□□□□ 0.09
TRAF4-211ENST00000478021 TTC32Q5I0X7 151 aa15.6■□□□□ 0.09
TRAF4-211ENST00000478021 DERL1Q9BUN8 251 aa15.6■□□□□ 0.09
TRAF4-211ENST00000478021 DNLZQ5SXM8 178 aa15.59■□□□□ 0.09
TRAF4-211ENST00000478021 SLC25A29Q8N8R3 303 aa15.59■□□□□ 0.09
TRAF4-211ENST00000478021 TXNDC17Q9BRA2 123 aa15.59■□□□□ 0.09
TRAF4-211ENST00000478021 JPT2Q9H910 190 aa15.59■□□□□ 0.09
TRAF4-211ENST00000478021 FAT2Q9NYQ8 4349 aa15.58■□□□□ 0.09
TRAF4-211ENST00000478021 SIVA1O15304 175 aa15.58■□□□□ 0.08
TRAF4-211ENST00000478021 RPL35P42766 123 aaKnown RBP15.58■□□□□ 0.08
TRAF4-211ENST00000478021 RPL19P84098 196 aaKnown RBP15.58■□□□□ 0.08
TRAF4-211ENST00000478021 ZNF575Q86XF7 245 aa15.58■□□□□ 0.08
TRAF4-211ENST00000478021 MLST8Q9BVC4 326 aa15.58■□□□□ 0.08
TRAF4-211ENST00000478021 PARLQ9H300 379 aa15.58■□□□□ 0.08
TRAF4-211ENST00000478021 CIDEAO60543 219 aa15.57■□□□□ 0.08
TRAF4-211ENST00000478021 DMRTA1Q5VZB9 504 aa15.57■□□□□ 0.08
TRAF4-211ENST00000478021 PRR27Q6MZM9 219 aa15.57■□□□□ 0.08
TRAF4-211ENST00000478021 C11orf52Q96A22 123 aa15.57■□□□□ 0.08
TRAF4-211ENST00000478021 HERC2O95714 4834 aa15.56■□□□□ 0.08
TRAF4-211ENST00000478021 A8MWV9 139 aa15.56■□□□□ 0.08
TRAF4-211ENST00000478021 NKX2-5P52952 324 aaPredicted RBP15.56■□□□□ 0.08
TRAF4-211ENST00000478021 TNP2Q05952 138 aa15.56■□□□□ 0.08
TRAF4-211ENST00000478021 PRADC1Q9BSG0 188 aa15.56■□□□□ 0.08
TRAF4-211ENST00000478021 TRBV6-4A0A1B0GX49 114 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 IFNA1P01562 189 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 RHOHQ15669 191 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 ALKAL2Q6UX46 152 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 Q6ZSN1 163 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 SYT8Q8NBV8 401 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 SAMD10Q9BYL1 202 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 PHLDA3Q9Y5J5 127 aa15.55■□□□□ 0.08
TRAF4-211ENST00000478021 A0A1W2PPQ1 181 aa15.54■□□□□ 0.08
TRAF4-211ENST00000478021 MGST1P10620 155 aaKnown RBP15.54■□□□□ 0.08
TRAF4-211ENST00000478021 MEF2BQ02080 365 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-211ENST00000478021 PIK3CD-AS1Q5SR53 167 aa15.54■□□□□ 0.08
TRAF4-211ENST00000478021 WFDC10BQ8IUB3 73 aa15.54■□□□□ 0.08
TRAF4-211ENST00000478021 KRTAP17-1Q9BYP8 105 aa15.54■□□□□ 0.08
TRAF4-211ENST00000478021 M0R381 172 aa15.53■□□□□ 0.08
TRAF4-211ENST00000478021 BCL2P10415 239 aa15.53■□□□□ 0.08
TRAF4-211ENST00000478021 CENPWQ5EE01 88 aa15.53■□□□□ 0.08
TRAF4-211ENST00000478021 SCRT2Q9NQ03 307 aa15.53■□□□□ 0.08
TRAF4-211ENST00000478021 RAB19A4D1S5 217 aa15.52■□□□□ 0.08
TRAF4-211ENST00000478021 ZFP2Q6ZN57 461 aa15.52■□□□□ 0.08
TRAF4-211ENST00000478021 FAM74A4Q5TZK3 123 aa15.51■□□□□ 0.07
TRAF4-211ENST00000478021 UFSP1Q6NVU6 142 aa15.51■□□□□ 0.07
TRAF4-211ENST00000478021 SH2D6Q7Z4S9 175 aa15.51■□□□□ 0.07
TRAF4-211ENST00000478021 BOLA1Q9Y3E2 137 aa15.51■□□□□ 0.07
TRAF4-211ENST00000478021 A0A087WWL8 130 aa15.5■□□□□ 0.07
TRAF4-211ENST00000478021 PDE6DO43924 150 aa15.5■□□□□ 0.07
TRAF4-211ENST00000478021 LINC00315P59091 139 aa15.5■□□□□ 0.07
TRAF4-211ENST00000478021 ZFP82Q8N141 532 aa15.5■□□□□ 0.07
TRAF4-211ENST00000478021 MED9Q9NWA0 146 aa15.5■□□□□ 0.07
TRAF4-211ENST00000478021 VAX2Q9UIW0 290 aa15.5■□□□□ 0.07
TRAF4-211ENST00000478021 IGLV2-8P01709 118 aa15.49■□□□□ 0.07
TRAF4-211ENST00000478021 C14orf178Q8N769 122 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-211ENST00000478021 SFRP2Q96HF1 295 aa15.49■□□□□ 0.07
TRAF4-211ENST00000478021 LY96Q9Y6Y9 160 aa15.49■□□□□ 0.07
TRAF4-211ENST00000478021 GAGE12JA6NER3 117 aa15.48■□□□□ 0.07
TRAF4-211ENST00000478021 GNG4P50150 75 aa15.48■□□□□ 0.07
TRAF4-211ENST00000478021 GAGE1Q13065 139 aa15.48■□□□□ 0.07
TRAF4-211ENST00000478021 GAGE4Q13068 117 aa15.48■□□□□ 0.07
TRAF4-211ENST00000478021 GAGE5Q13069 117 aa15.48■□□□□ 0.07
TRAF4-211ENST00000478021 GAGE13Q4V321 117 aa15.48■□□□□ 0.07
TRAF4-211ENST00000478021 OR10AG1Q8NH19 301 aa15.48■□□□□ 0.07
TRAF4-211ENST00000478021 MUC21A0A0G2JKD1 596 aa15.47■□□□□ 0.07
TRAF4-211ENST00000478021 MUC21A0A140T8X8 626 aa15.47■□□□□ 0.07
TRAF4-211ENST00000478021 RHODO00212 210 aa15.47■□□□□ 0.07
TRAF4-211ENST00000478021 CXCL1P09341 107 aa15.47■□□□□ 0.07
TRAF4-211ENST00000478021 MED14OSP0DP75 135 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms