RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 DEFB112Q30KQ8 113 aa15.55■□□□□ 0.08
TMED4-204ENST00000477639 SELENOKQ9Y6D0 94 aa15.55■□□□□ 0.08
TMED4-204ENST00000477639 IGHV4-59P01825 116 aa15.54■□□□□ 0.08
TMED4-204ENST00000477639 SLC25A16P16260 332 aa15.54■□□□□ 0.08
TMED4-204ENST00000477639 S100A4P26447 101 aaKnown RBP15.54■□□□□ 0.08
TMED4-204ENST00000477639 NMUP48645 174 aa15.54■□□□□ 0.08
TMED4-204ENST00000477639 OTOGQ6ZRI0 2925 aa15.54■□□□□ 0.08
TMED4-204ENST00000477639 GNRH2O43555 120 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 IGKCP01834 107 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 SRD5A1P18405 259 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 ADAMTSL5Q6ZMM2 481 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 SMIM2Q9BVW6 85 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 CELSR1Q9NYQ6 3014 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 A0A096LNT2 108 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 LINC01356Q8N9X3 169 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 MYOZ3Q8TDC0 251 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 RASL10AQ92737 203 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 DPH3P1Q9H4G8 78 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 PHLDA3Q9Y5J5 127 aa15.53■□□□□ 0.08
TMED4-204ENST00000477639 RNASE3P12724 160 aaKnown RBP15.52■□□□□ 0.07
TMED4-204ENST00000477639 HSD52Q0P140 79 aa15.52■□□□□ 0.07
TMED4-204ENST00000477639 IGKV2D-26A0A0A0MRZ7 120 aa15.51■□□□□ 0.07
TMED4-204ENST00000477639 DPM2O94777 84 aa15.51■□□□□ 0.07
TMED4-204ENST00000477639 DCANP1Q8TF63 244 aa15.51■□□□□ 0.07
TMED4-204ENST00000477639 KLLNB2CW77 178 aa15.51■□□□□ 0.07
TMED4-204ENST00000477639 C14orf178Q8N769 122 aaPredicted RBP15.51■□□□□ 0.07
TMED4-204ENST00000477639 ID1P41134 155 aa15.5■□□□□ 0.07
TMED4-204ENST00000477639 C20orf78Q9BR46 151 aa15.5■□□□□ 0.07
TMED4-204ENST00000477639 TMEM89A2RUT3 159 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 C7orf71A4D174 169 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 C10orf99Q6UWK7 81 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 RNF223E7ERA6 249 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 NXPH4O95158 308 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 SUMO2P61956 95 aaKnown RBP15.49■□□□□ 0.07
TMED4-204ENST00000477639 DEFB113Q30KQ7 82 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 SAMD13Q5VXD3 122 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 AMMECR1LQ6DCA0 310 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 POM121L12Q8N7R1 296 aa15.49■□□□□ 0.07
TMED4-204ENST00000477639 MRPL35Q9NZE8 188 aaKnown RBP15.49■□□□□ 0.07
TMED4-204ENST00000477639 OR4C5Q8NGB2 326 aa15.48■□□□□ 0.07
TMED4-204ENST00000477639 RPL39LQ96EH5 51 aaKnown RBP15.48■□□□□ 0.07
TMED4-204ENST00000477639 A0A087WX48 190 aa15.47■□□□□ 0.07
TMED4-204ENST00000477639 TRAV8-6A0A0B4J262 113 aa15.47■□□□□ 0.07
TMED4-204ENST00000477639 J3QLI3 93 aa15.47■□□□□ 0.07
TMED4-204ENST00000477639 K7EP13 123 aa15.47■□□□□ 0.07
TMED4-204ENST00000477639 ORMDL2Q53FV1 153 aa15.47■□□□□ 0.07
TMED4-204ENST00000477639 GTSCR1Q86UQ5 136 aa15.47■□□□□ 0.07
TMED4-204ENST00000477639 MAP1AP78559 2803 aaPredicted RBP15.47■□□□□ 0.07
TMED4-204ENST00000477639 PRRC2AP48634 2157 aaKnown RBP15.46■□□□□ 0.07
TMED4-204ENST00000477639 A6NDN8 102 aa15.46■□□□□ 0.07
TMED4-204ENST00000477639 H3BRM9 83 aa15.46■□□□□ 0.07
TMED4-204ENST00000477639 ZC2HC1BQ5TFG8 222 aa15.46■□□□□ 0.07
TMED4-204ENST00000477639 HIGD1BQ9P298 99 aa15.46■□□□□ 0.07
TMED4-204ENST00000477639 K7EMI3 77 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 MGPP08493 103 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 TOMM6Q96B49 74 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 AP1S3Q96PC3 154 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 TMEM160Q9NX00 188 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 KIF25-AS1Q9Y6Z4 181 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.45■□□□□ 0.061e-8■■■■■ 43.5
TMED4-204ENST00000477639 HLA-DRB4P13762 266 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 LINC00315P59091 139 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 TTTY13Q9BZ97 58 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 HLA-DRB4X5D2U9 266 aa15.45■□□□□ 0.06
TMED4-204ENST00000477639 TRAV12-1A0A0B4J245 112 aa15.44■□□□□ 0.06
TMED4-204ENST00000477639 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.44■□□□□ 0.06
TMED4-204ENST00000477639 BEX4Q9NWD9 120 aaPredicted RBP15.44■□□□□ 0.06
TMED4-204ENST00000477639 TGFAP01135 160 aa15.44■□□□□ 0.06
TMED4-204ENST00000477639 FAM159AQ6UWV7 190 aa15.43■□□□□ 0.06
TMED4-204ENST00000477639 C9orf118A6NHY6 69 aa15.42■□□□□ 0.06
TMED4-204ENST00000477639 MAPK1IP1LQ8NDC0 245 aa15.42■□□□□ 0.06
TMED4-204ENST00000477639 PPP1R17O96001 155 aa15.42■□□□□ 0.06
TMED4-204ENST00000477639 FSHBP01225 129 aa15.42■□□□□ 0.06
TMED4-204ENST00000477639 RNASE8Q8TDE3 154 aaKnown RBP15.42■□□□□ 0.06
TMED4-204ENST00000477639 WFDC12Q8WWY7 111 aa15.42■□□□□ 0.06
TMED4-204ENST00000477639 ODF3Q96PU9 254 aa15.42■□□□□ 0.06
TMED4-204ENST00000477639 SCGB3A1Q96QR1 104 aa15.42■□□□□ 0.06
TMED4-204ENST00000477639 H7C1H1 209 aa15.41■□□□□ 0.06
TMED4-204ENST00000477639 PLNP26678 52 aa15.41■□□□□ 0.06
TMED4-204ENST00000477639 K7EQG2 157 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 ZNF688P0C7X2 276 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 IGHV4OR15-8A0A075B7B6 117 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 A0A087WW49 117 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 TRAV12-3A0A0B4J271 114 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 A0A0J9YX75 114 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 NEXN-AS1Q8NBZ9 246 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 VPREB3Q9UKI3 123 aa15.4■□□□□ 0.06
TMED4-204ENST00000477639 ZNF469Q96JG9 3925 aaPredicted RBP15.4■□□□□ 0.06
TMED4-204ENST00000477639 MUC4Q99102 2169 aa15.39■□□□□ 0.06
TMED4-204ENST00000477639 ITPR3Q14573 2671 aa15.39■□□□□ 0.05
TMED4-204ENST00000477639 TRBV25-1A0A075B6N4 114 aa15.39■□□□□ 0.05
TMED4-204ENST00000477639 F8VRH5 84 aa15.39■□□□□ 0.05
TMED4-204ENST00000477639 LGALS1P09382 135 aaKnown RBP15.39■□□□□ 0.05
TMED4-204ENST00000477639 WFDC11Q8NEX6 87 aa15.39■□□□□ 0.05
TMED4-204ENST00000477639 CHAC1Q9BUX1 264 aa15.39■□□□□ 0.05
TMED4-204ENST00000477639 CSTL1Q9H114 145 aa15.39■□□□□ 0.05
TMED4-204ENST00000477639 RPL32P62910 135 aaKnown RBP15.38■□□□□ 0.05
TMED4-204ENST00000477639 Q5PR19 223 aa15.38■□□□□ 0.05
TMED4-204ENST00000477639 C2orf66Q6UXQ4 117 aa15.38■□□□□ 0.05
TMED4-204ENST00000477639 Q6YL49 198 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms