RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 SMIM3Q9BZL3 60 aa7.8□□□□□ -1.16
HDAC6-219ENST00000476625 TRBV6-4A0A1B0GX49 114 aa7.79□□□□□ -1.16
HDAC6-219ENST00000476625 H2AFB2P0C5Z0 115 aa7.79□□□□□ -1.16
HDAC6-219ENST00000476625 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
HDAC6-219ENST00000476625 OR2T35Q8NGX2 323 aa7.79□□□□□ -1.16
HDAC6-219ENST00000476625 NMES1Q9C002 83 aa7.79□□□□□ -1.16
HDAC6-219ENST00000476625 OTORQ9NRC9 128 aa7.79□□□□□ -1.16
HDAC6-219ENST00000476625 MBD2Q9UBB5 411 aa7.79□□□□□ -1.16
HDAC6-219ENST00000476625 LENEPQ9Y5L5 61 aa7.79□□□□□ -1.16
HDAC6-219ENST00000476625 IGKV2D-24A0A075B6R9 120 aa7.78□□□□□ -1.16
HDAC6-219ENST00000476625 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
HDAC6-219ENST00000476625 TMED6Q8WW62 240 aa7.78□□□□□ -1.16
HDAC6-219ENST00000476625 PARLQ9H300 379 aa7.78□□□□□ -1.16
HDAC6-219ENST00000476625 RNF222A6NCQ9 220 aa7.77□□□□□ -1.17
HDAC6-219ENST00000476625 ODF1Q14990 250 aa7.77□□□□□ -1.17
HDAC6-219ENST00000476625 KHDC3LQ587J8 217 aa7.77□□□□□ -1.17
HDAC6-219ENST00000476625 CMTM2Q8TAZ6 248 aa7.77□□□□□ -1.17
HDAC6-219ENST00000476625 WFDC1Q9HC57 220 aa7.77□□□□□ -1.17
HDAC6-219ENST00000476625 KLK12Q9UKR0 248 aa7.77□□□□□ -1.17
HDAC6-219ENST00000476625 TRAV8-3A0A0A6YYJ7 113 aa7.76□□□□□ -1.17
HDAC6-219ENST00000476625 PANO1I0J062 215 aa7.76□□□□□ -1.17
HDAC6-219ENST00000476625 PTTG1O95997 202 aa7.76□□□□□ -1.17
HDAC6-219ENST00000476625 GCGP01275 180 aa7.76□□□□□ -1.17
HDAC6-219ENST00000476625 RAB2AP61019 212 aa7.76□□□□□ -1.17
HDAC6-219ENST00000476625 RPL37AP61513 92 aaKnown RBP7.76□□□□□ -1.17
HDAC6-219ENST00000476625 ATP5SQ99766 215 aa7.76□□□□□ -1.17
HDAC6-219ENST00000476625 GGTLC3B5MD39 225 aa7.75□□□□□ -1.17
HDAC6-219ENST00000476625 C17orf112F2Z3M2 114 aa7.75□□□□□ -1.17
HDAC6-219ENST00000476625 IGLV2-11P01706 119 aa7.75□□□□□ -1.17
HDAC6-219ENST00000476625 MGST1P10620 155 aaKnown RBP7.75□□□□□ -1.17
HDAC6-219ENST00000476625 KCNS1Q96KK3 526 aa7.75□□□□□ -1.17
HDAC6-219ENST00000476625 MARVELD1Q9BSK0 173 aa7.75□□□□□ -1.17
HDAC6-219ENST00000476625 IGKV3D-20A0A0C4DH25 116 aa7.74□□□□□ -1.17
HDAC6-219ENST00000476625 NIT1Q86X76 327 aa7.74□□□□□ -1.17
HDAC6-219ENST00000476625 CYB561D1Q8N8Q1 229 aa7.74□□□□□ -1.17
HDAC6-219ENST00000476625 UBE2WQ96B02 151 aa7.74□□□□□ -1.17
HDAC6-219ENST00000476625 KCNIP2Q9NS61 270 aa7.74□□□□□ -1.17
HDAC6-219ENST00000476625 INMT-MINDY4F8WBC2 141 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 IFITM3Q01628 133 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 RGS21Q2M5E4 152 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 LGALSLQ3ZCW2 172 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-219ENST00000476625 UFSP1Q6NVU6 142 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 Q8N976 141 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 LINC00479Q96M42 142 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 PSG8Q9UQ74 426 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 HSPB11Q9Y547 144 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-219ENST00000476625 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
HDAC6-219ENST00000476625 TCRAP04437 139 aa7.72□□□□□ -1.17
HDAC6-219ENST00000476625 ARL14EPLP0DKL9 152 aa7.72□□□□□ -1.17
HDAC6-219ENST00000476625 H2BFSP57053 126 aa7.72□□□□□ -1.17
HDAC6-219ENST00000476625 TAS2R45P59539 299 aa7.72□□□□□ -1.17
HDAC6-219ENST00000476625 CYCSP99999 105 aaKnown RBP7.72□□□□□ -1.17
HDAC6-219ENST00000476625 A0A087WWL8 130 aa7.71□□□□□ -1.18
HDAC6-219ENST00000476625 TRAV34A0A0B4J273 112 aa7.71□□□□□ -1.18
HDAC6-219ENST00000476625 H3BVH4 76 aa7.71□□□□□ -1.18
HDAC6-219ENST00000476625 TAAR5O14804 337 aa7.71□□□□□ -1.18
HDAC6-219ENST00000476625 FAM74A1Q5RGS3 127 aa7.71□□□□□ -1.18
HDAC6-219ENST00000476625 FAM74A4Q5TZK3 123 aa7.71□□□□□ -1.18
HDAC6-219ENST00000476625 TOR2AQ5JU69 321 aa7.7□□□□□ -1.18
HDAC6-219ENST00000476625 ENHOQ6UWT2 76 aa7.7□□□□□ -1.18
HDAC6-219ENST00000476625 SCGB1C1Q8TD33 95 aa7.7□□□□□ -1.18
HDAC6-219ENST00000476625 PPP1R1CQ8WVI7 109 aa7.7□□□□□ -1.18
HDAC6-219ENST00000476625 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
HDAC6-219ENST00000476625 URGCP-MRPS24S4R325 110 aa7.7□□□□□ -1.18
HDAC6-219ENST00000476625 TNXBP22105 4242 aa7.7□□□□□ -1.18
HDAC6-219ENST00000476625 A0A1W2PPV4 95 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 GRIFINA4D1Z8 144 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 USP17L23D6RBM5 183 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 CIDEAO60543 219 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 HLA-DQA1P01909 254 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 PRSS1P07477 247 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 FLI1Q01543 452 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-219ENST00000476625 SMUG1Q53HV7 270 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 ZFP2Q6ZN57 461 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 OR10G9Q8NGN4 311 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 OR10G7Q8NGN6 311 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 PTH2Q96A98 100 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 RMI2Q96E14 147 aa7.69□□□□□ -1.18
HDAC6-219ENST00000476625 A8MWV9 139 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 M0R036 132 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 MPC2O95563 127 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 GCHFRP30047 84 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 RPL12P30050 165 aaKnown RBP7.68□□□□□ -1.18
HDAC6-219ENST00000476625 SUMO1P63165 101 aaKnown RBP7.68□□□□□ -1.18
HDAC6-219ENST00000476625 ACOT6Q3I5F7 207 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-219ENST00000476625 ATRAIDQ6UW56 229 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 PQLC2Q6ZP29 291 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 C15orf54Q8N8G6 183 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 COX11Q9Y6N1 276 aa7.68□□□□□ -1.18
HDAC6-219ENST00000476625 A0A087WX48 190 aa7.67□□□□□ -1.18
HDAC6-219ENST00000476625 SSNA1O43805 119 aa7.67□□□□□ -1.18
HDAC6-219ENST00000476625 S100A4P26447 101 aaKnown RBP7.67□□□□□ -1.18
HDAC6-219ENST00000476625 CDC34P49427 236 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-219ENST00000476625 MPV17L2Q567V2 206 aa7.67□□□□□ -1.18
HDAC6-219ENST00000476625 C5orf17Q8NAS9 161 aa7.67□□□□□ -1.18
HDAC6-219ENST00000476625 OR2G3Q8NGZ4 309 aa7.67□□□□□ -1.18
HDAC6-219ENST00000476625 EPDR1Q9UM22 224 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms