RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TNP2Q05952 138 aa14.5□□□□□ -0.09
LIME1-204ENST00000476183 TTC32Q5I0X7 151 aa14.5□□□□□ -0.09
LIME1-204ENST00000476183 PTH2Q96A98 100 aa14.5□□□□□ -0.09
LIME1-204ENST00000476183 SH2D1AO60880 128 aa14.49□□□□□ -0.09
LIME1-204ENST00000476183 LTAP01374 205 aa14.49□□□□□ -0.09
LIME1-204ENST00000476183 ORM1P02763 201 aa14.49□□□□□ -0.09
LIME1-204ENST00000476183 SRIP30626 198 aa14.49□□□□□ -0.09
LIME1-204ENST00000476183 AKR1C3P42330 323 aa14.49□□□□□ -0.09
LIME1-204ENST00000476183 PCNPQ8WW12 178 aaKnown RBP14.49□□□□□ -0.09
LIME1-204ENST00000476183 SCO2A0A1W2PP80 73 aa14.48□□□□□ -0.09
LIME1-204ENST00000476183 A0A1W2PPQ1 181 aa14.48□□□□□ -0.09
LIME1-204ENST00000476183 ZNF575Q86XF7 245 aa14.48□□□□□ -0.09
LIME1-204ENST00000476183 IGHV3-73A0A0B4J1V6 119 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 B4DEV8 164 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 KRBOX1C9JBD0 128 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 SIVA1O15304 175 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 ASIPP42127 132 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 CCL20P78556 96 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 ZNF674Q2M3X9 581 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 FAM162BQ5T6X4 162 aa14.47□□□□□ -0.09
LIME1-204ENST00000476183 M0R036 132 aa14.46□□□□□ -0.09
LIME1-204ENST00000476183 C1QBP02746 253 aa14.46□□□□□ -0.09
LIME1-204ENST00000476183 S100A4P26447 101 aaKnown RBP14.46□□□□□ -0.09
LIME1-204ENST00000476183 SLC25A29Q8N8R3 303 aa14.46□□□□□ -0.09
LIME1-204ENST00000476183 NHLRC2Q8NBF2 726 aa14.46□□□□□ -0.09
LIME1-204ENST00000476183 TXNDC17Q9BRA2 123 aa14.45□□□□□ -0.1
LIME1-204ENST00000476183 IL36BQ9NZH7 164 aa14.45□□□□□ -0.1
LIME1-204ENST00000476183 GRIFINA4D1Z8 144 aa14.44□□□□□ -0.1
LIME1-204ENST00000476183 H3BVH4 76 aa14.44□□□□□ -0.1
LIME1-204ENST00000476183 DNLZQ5SXM8 178 aa14.44□□□□□ -0.1
LIME1-204ENST00000476183 hCG_2014768A0A024R1R8 64 aa14.43□□□□□ -0.1
LIME1-204ENST00000476183 TRAV1-1A0A0B4J248 108 aa14.43□□□□□ -0.1
LIME1-204ENST00000476183 CIDEAO60543 219 aa14.43□□□□□ -0.1
LIME1-204ENST00000476183 LINC01559Q495D7 138 aa14.43□□□□□ -0.1
LIME1-204ENST00000476183 JPT2Q9H910 190 aa14.43□□□□□ -0.1
LIME1-204ENST00000476183 LRP1BQ9NZR2 4599 aa14.43□□□□□ -0.1
LIME1-204ENST00000476183 TMSB15BA0A087X1C1 80 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 TRBV6-4A0A1B0GX49 114 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 ARMS2P0C7Q2 107 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 SULT1A2P50226 295 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 RAB5CP51148 216 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 LINC00315P59091 139 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 Q6ZSN1 163 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 WFDC10BQ8IUB3 73 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 PARLQ9H300 379 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 GNG13Q9P2W3 67 aa14.42□□□□□ -0.1
LIME1-204ENST00000476183 S100A9P06702 114 aaKnown RBP14.41□□□□□ -0.1
LIME1-204ENST00000476183 RHOHQ15669 191 aa14.41□□□□□ -0.1
LIME1-204ENST00000476183 PIK3CD-AS1Q5SR53 167 aa14.41□□□□□ -0.1
LIME1-204ENST00000476183 DMRTA1Q5VZB9 504 aa14.41□□□□□ -0.1
LIME1-204ENST00000476183 EIF5AL1Q6IS14 154 aaKnown RBP14.41□□□□□ -0.1
LIME1-204ENST00000476183 MLST8Q9BVC4 326 aa14.41□□□□□ -0.1
LIME1-204ENST00000476183 A8MWV9 139 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 BTF3P20290 206 aaKnown RBP14.4□□□□□ -0.1
LIME1-204ENST00000476183 UFSP1Q6NVU6 142 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 AKAP14Q86UN6 197 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 SLC51BQ86UW2 128 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 PRADC1Q9BSG0 188 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 SAMD10Q9BYL1 202 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 SCRT2Q9NQ03 307 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 MANBALQ9NQG1 85 aa14.4□□□□□ -0.1
LIME1-204ENST00000476183 DNAH5Q8TE73 4624 aa14.39□□□□□ -0.11
LIME1-204ENST00000476183 MGST1P10620 155 aaKnown RBP14.39□□□□□ -0.11
LIME1-204ENST00000476183 ZFP2Q6ZN57 461 aa14.39□□□□□ -0.11
LIME1-204ENST00000476183 Q6ZRN7 208 aaPredicted RBP14.39□□□□□ -0.11
LIME1-204ENST00000476183 SH2D6Q7Z4S9 175 aa14.39□□□□□ -0.11
LIME1-204ENST00000476183 BAGE2Q86Y30 109 aa14.39□□□□□ -0.11
LIME1-204ENST00000476183 TIRAPP58753 221 aa14.38□□□□□ -0.11
LIME1-204ENST00000476183 C9orf62Q8N4C0 152 aa14.38□□□□□ -0.11
LIME1-204ENST00000476183 DERL1Q9BUN8 251 aa14.38□□□□□ -0.11
LIME1-204ENST00000476183 TNFRSF18Q9Y5U5 241 aa14.38□□□□□ -0.11
LIME1-204ENST00000476183 LY96Q9Y6Y9 160 aa14.38□□□□□ -0.11
LIME1-204ENST00000476183 RPL35P42766 123 aaKnown RBP14.37□□□□□ -0.11
LIME1-204ENST00000476183 RPL19P84098 196 aaKnown RBP14.37□□□□□ -0.11
LIME1-204ENST00000476183 C11orf52Q96A22 123 aa14.37□□□□□ -0.11
LIME1-204ENST00000476183 DNAH10OSP0CZ25 163 aa14.36□□□□□ -0.11
LIME1-204ENST00000476183 SYT8Q8NBV8 401 aa14.36□□□□□ -0.11
LIME1-204ENST00000476183 Q9UF83 564 aa14.36□□□□□ -0.11
LIME1-204ENST00000476183 PHLDA3Q9Y5J5 127 aa14.36□□□□□ -0.11
LIME1-204ENST00000476183 RYR1P21817 5038 aa14.36□□□□□ -0.11
LIME1-204ENST00000476183 M0R381 172 aa14.34□□□□□ -0.11
LIME1-204ENST00000476183 LINC00694P0DN24 101 aa14.34□□□□□ -0.11
LIME1-204ENST00000476183 MED14OSP0DP75 135 aa14.34□□□□□ -0.11
LIME1-204ENST00000476183 PRR27Q6MZM9 219 aa14.34□□□□□ -0.11
LIME1-204ENST00000476183 C14orf178Q8N769 122 aaPredicted RBP14.34□□□□□ -0.11
LIME1-204ENST00000476183 SFRP2Q96HF1 295 aa14.34□□□□□ -0.11
LIME1-204ENST00000476183 TEX46H3BTG2 121 aa14.33□□□□□ -0.12
LIME1-204ENST00000476183 TRAV9-2A0A087WT02 112 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 A0A087WWL8 130 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 GAGE12JA6NER3 117 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 CRYGDP07320 174 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 EVI2AP22794 236 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 GAGE1Q13065 139 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 GAGE4Q13068 117 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 GAGE5Q13069 117 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 GAGE13Q4V321 117 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 FAM74A4Q5TZK3 123 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 ZFP82Q8N141 532 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 ATP6V0E2Q8NHE4 81 aa14.32□□□□□ -0.12
LIME1-204ENST00000476183 HSPG2P98160 4391 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms