RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SHISA9B4DS77 424 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 TMEM178BH3BS89 294 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 ANGP03950 147 aaKnown RBP9.16□□□□□ -0.94
U2AF1-209ENST00000475639 POU2AF1Q16633 256 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 SPINK13Q1W4C9 94 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 TNRC6BQ9UPQ9 1833 aaKnown RBP9.16□□□□□ -0.94
U2AF1-209ENST00000475639 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 SMIM20Q8N5G0 67 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 IGHV1OR15-1A0A075B7D0 117 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 IGHV3-16A0A0C4DH30 117 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 RNASE2P10153 161 aaKnown RBP9.16□□□□□ -0.94
U2AF1-209ENST00000475639 PRR20EP86478 221 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 PRR20CP86479 221 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 PRR20DP86480 221 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 PRR20BP86481 221 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 PRR20AP86496 221 aa9.16□□□□□ -0.94
U2AF1-209ENST00000475639 IGLV3-12A0A075B6K2 115 aa9.15□□□□□ -0.94
U2AF1-209ENST00000475639 TRAV3A0A0B4J244 114 aa9.15□□□□□ -0.94
U2AF1-209ENST00000475639 SEC61GP60059 68 aa9.15□□□□□ -0.94
U2AF1-209ENST00000475639 FOXI2Q6ZQN5 318 aa9.15□□□□□ -0.94
U2AF1-209ENST00000475639 FAM231DQ6ZW35 169 aa9.15□□□□□ -0.94
U2AF1-209ENST00000475639 MRPL35Q9NZE8 188 aaKnown RBP9.15□□□□□ -0.94
U2AF1-209ENST00000475639 ORMDL1Q9P0S3 153 aa9.15□□□□□ -0.94
U2AF1-209ENST00000475639 ZFHX3Q15911 3703 aa9.15□□□□□ -0.94
U2AF1-209ENST00000475639 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.95
U2AF1-209ENST00000475639 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.95
U2AF1-209ENST00000475639 BAALC-AS2P0C853 105 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 BOD1L2Q8IYS8 172 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 C14orf132Q9NPU4 83 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 FRYLO94915 3013 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 AMTNQ6UX39 209 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 BUB1B-PAK6H3BSN5 160 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 CFHR4Q92496 578 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 EYSQ5T1H1 3165 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 FREM1Q5H8C1 2179 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 NPYP01303 97 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 IGHG2P01859 326 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 CFC1P0CG37 223 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 CFHR3Q02985 330 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 IGFBPL1Q8WX77 278 aa9.14□□□□□ -0.95
U2AF1-209ENST00000475639 ATOX1O00244 68 aa9.13□□□□□ -0.95
U2AF1-209ENST00000475639 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
U2AF1-209ENST00000475639 FREM2Q5SZK8 3169 aa9.13□□□□□ -0.95
U2AF1-209ENST00000475639 PTPRBP23467 1997 aa9.13□□□□□ -0.95
U2AF1-209ENST00000475639 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
U2AF1-209ENST00000475639 SRSF2Q01130 221 aaKnown RBP9.12□□□□□ -0.95
U2AF1-209ENST00000475639 Q8TCH9 128 aa9.12□□□□□ -0.95
U2AF1-209ENST00000475639 NREPQ16612 68 aa9.12□□□□□ -0.95
U2AF1-209ENST00000475639 APOC4P55056 127 aa9.12□□□□□ -0.95
U2AF1-209ENST00000475639 CFHR1Q03591 330 aa9.12□□□□□ -0.95
U2AF1-209ENST00000475639 WFDC2Q14508 124 aa9.12□□□□□ -0.95
U2AF1-209ENST00000475639 DEFB105AQ8NG35 78 aa9.12□□□□□ -0.95
U2AF1-209ENST00000475639 ZNF747Q9BV97 191 aa9.12□□□□□ -0.95
U2AF1-209ENST00000475639 H0YGX0 51 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 IGHV3-38A0A0C4DH36 116 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 IGLL5B9A064 214 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 PRB1P04280 392 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 PSMB8P28062 276 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 MLANAQ16655 118 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
U2AF1-209ENST00000475639 SS18L2Q9UHA2 77 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 SAA4P35542 130 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 CEND1Q8N111 149 aa9.11□□□□□ -0.95
U2AF1-209ENST00000475639 CR1LQ2VPA4 569 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 SIVA1O15304 175 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 CD177Q8N6Q3 437 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 IGKV1OR2-108A0A075B7D4 117 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 J3KT08 172 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 GATA3P23771 443 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 C12orf74Q32Q52 190 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 PRR25Q96S07 402 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 CELSR3Q9NYQ7 3312 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
U2AF1-209ENST00000475639 C20orf78Q9BR46 151 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 KLK9Q9UKQ9 250 aa9.1□□□□□ -0.95
U2AF1-209ENST00000475639 ZNF503-AS2A6NEH8 195 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 C10orf142B7Z368 130 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 K7ERS5 55 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 IGKV2D-24A0A075B6R9 120 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 INSL3P51460 131 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
U2AF1-209ENST00000475639 MUSTN1Q8IVN3 82 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 FAM110DQ8TAY7 271 aaPredicted RBP9.09□□□□□ -0.95
U2AF1-209ENST00000475639 TRBV19A0A075B6N1 114 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 PROP1O75360 226 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 VSIG2Q96IQ7 327 aa9.09□□□□□ -0.95
U2AF1-209ENST00000475639 BUB3O43684 328 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
U2AF1-209ENST00000475639 PCP2Q8IVA1 136 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 K7ERJ3 54 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 HERV-K104P63124 156 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 LY6DQ14210 128 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 RHOHQ15669 191 aa9.08□□□□□ -0.96
U2AF1-209ENST00000475639 WDR86Q86TI4 376 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms