RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 POM121L12Q8N7R1 296 aa16.2■□□□□ 0.18
CCM2-206ENST00000474617 LINC01006Q8NI28 216 aa16.2■□□□□ 0.18
CCM2-206ENST00000474617 C20orf78Q9BR46 151 aa16.2■□□□□ 0.18
CCM2-206ENST00000474617 NCR2O95944 276 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 CMC4P56277 68 aaPredicted RBP16.19■□□□□ 0.18
CCM2-206ENST00000474617 DEFB114Q30KQ6 69 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 SPATA45Q537H7 98 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 Q6ZQT7 251 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 SYT8Q8NBV8 401 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 C14orf144Q96I85 54 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 NBPF19A0A087WUL8 3843 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 TRGV11A0A075B6L2 103 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 SMKR1H3BMG3 65 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 CCL24O00175 119 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 AMTNQ6UX39 209 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 ZNF705AQ6ZN79 300 aaPredicted RBP16.19■□□□□ 0.18
CCM2-206ENST00000474617 RAX2Q96IS3 184 aa16.19■□□□□ 0.18
CCM2-206ENST00000474617 IGHV1OR15-1A0A075B7D0 117 aa16.18■□□□□ 0.18
CCM2-206ENST00000474617 TRAV12-3A0A0B4J271 114 aa16.18■□□□□ 0.18
CCM2-206ENST00000474617 LINC01545Q5VT33 79 aa16.18■□□□□ 0.18
CCM2-206ENST00000474617 TMEM61Q8N0U2 210 aa16.18■□□□□ 0.18
CCM2-206ENST00000474617 NRACQ8N912 160 aa16.18■□□□□ 0.18
CCM2-206ENST00000474617 UQCR10Q9UDW1 63 aa16.18■□□□□ 0.18
CCM2-206ENST00000474617 SMIM17P0DL12 118 aa16.17■□□□□ 0.18
CCM2-206ENST00000474617 FCER1GP30273 86 aa16.17■□□□□ 0.18
CCM2-206ENST00000474617 HSBP1L1C9JCN9 74 aa16.16■□□□□ 0.18
CCM2-206ENST00000474617 GNRH2O43555 120 aa16.16■□□□□ 0.18
CCM2-206ENST00000474617 CD7P09564 240 aa16.16■□□□□ 0.18
CCM2-206ENST00000474617 C9orf85Q96MD7 179 aa16.16■□□□□ 0.18
CCM2-206ENST00000474617 ST20Q9HBF5 79 aa16.16■□□□□ 0.18
CCM2-206ENST00000474617 TIMM8BQ9Y5J9 83 aaPredicted RBP16.16■□□□□ 0.18
CCM2-206ENST00000474617 A0A096LNJ9 63 aa16.15■□□□□ 0.18
CCM2-206ENST00000474617 DEFB131AP59861 70 aa16.15■□□□□ 0.18
CCM2-206ENST00000474617 KIR3DS1Q14943 382 aa16.15■□□□□ 0.18
CCM2-206ENST00000474617 ITPR2Q14571 2701 aa16.15■□□□□ 0.18
CCM2-206ENST00000474617 IGHV3-16A0A0C4DH30 117 aa16.14■□□□□ 0.18
CCM2-206ENST00000474617 H3BMM0 161 aa16.14■□□□□ 0.18
CCM2-206ENST00000474617 CD28P10747 220 aa16.14■□□□□ 0.18
CCM2-206ENST00000474617 RPL32P62910 135 aaKnown RBP16.14■□□□□ 0.18
CCM2-206ENST00000474617 SELENOKQ9Y6D0 94 aa16.14■□□□□ 0.18
CCM2-206ENST00000474617 IGLV2-18A0A075B6J9 118 aa16.14■□□□□ 0.17
CCM2-206ENST00000474617 LINC01549A6NIU2 74 aa16.14■□□□□ 0.17
CCM2-206ENST00000474617 LGALS9BQ3B8N2 356 aa16.14■□□□□ 0.17
CCM2-206ENST00000474617 PIK3CD-AS1Q5SR53 167 aa16.14■□□□□ 0.17
CCM2-206ENST00000474617 LGALS9CQ6DKI2 356 aa16.14■□□□□ 0.17
CCM2-206ENST00000474617 LINC00467Q9BRT7 94 aa16.14■□□□□ 0.17
CCM2-206ENST00000474617 SONP18583 2426 aaKnown RBP16.13■□□□□ 0.17
CCM2-206ENST00000474617 G0S2P27469 103 aa16.13■□□□□ 0.17
CCM2-206ENST00000474617 SPINK13Q1W4C9 94 aa16.13■□□□□ 0.17
CCM2-206ENST00000474617 IGLC3P0DOY3 106 aa16.12■□□□□ 0.17
CCM2-206ENST00000474617 LAGE3Q14657 143 aa16.12■□□□□ 0.17
CCM2-206ENST00000474617 ORMDL2Q53FV1 153 aa16.12■□□□□ 0.17
CCM2-206ENST00000474617 LINC00173Q6ZV60 143 aa16.12■□□□□ 0.17
CCM2-206ENST00000474617 SMIM2Q9BVW6 85 aa16.12■□□□□ 0.17
CCM2-206ENST00000474617 MAP6D1Q9H9H5 199 aa16.12■□□□□ 0.17
CCM2-206ENST00000474617 ATP5LO75964 103 aa16.11■□□□□ 0.17
CCM2-206ENST00000474617 FOSL1P15407 271 aa16.11■□□□□ 0.17
CCM2-206ENST00000474617 CD300EQ496F6 205 aaPredicted RBP16.11■□□□□ 0.17
CCM2-206ENST00000474617 C14orf178Q8N769 122 aaPredicted RBP16.11■□□□□ 0.17
CCM2-206ENST00000474617 IFI27L1Q96BM0 104 aa16.11■□□□□ 0.17
CCM2-206ENST00000474617 CITED2Q99967 270 aaPredicted RBP16.11■□□□□ 0.17
CCM2-206ENST00000474617 ZNF469Q96JG9 3925 aaPredicted RBP16.11■□□□□ 0.17
CCM2-206ENST00000474617 SUMO2P61956 95 aaKnown RBP16.1■□□□□ 0.17
CCM2-206ENST00000474617 PTH2Q96A98 100 aa16.1■□□□□ 0.17
CCM2-206ENST00000474617 DUX3Q96PT4 197 aa16.1■□□□□ 0.17
CCM2-206ENST00000474617 ZNF256Q9Y2P7 627 aaPredicted RBP16.1■□□□□ 0.17
CCM2-206ENST00000474617 KIF25-AS1Q9Y6Z4 181 aa16.1■□□□□ 0.17
CCM2-206ENST00000474617 M0R143 59 aa16.09■□□□□ 0.17
CCM2-206ENST00000474617 IGKV3-20P01619 116 aa16.09■□□□□ 0.17
CCM2-206ENST00000474617 FAM110AQ9BQ89 295 aa16.09■□□□□ 0.17
CCM2-206ENST00000474617 Q8N1Y9 231 aa16.09■□□□□ 0.17
CCM2-206ENST00000474617 TRAV12-2A0A075B6T6 113 aa16.08■□□□□ 0.16
CCM2-206ENST00000474617 PROK1P58294 105 aa16.08■□□□□ 0.16
CCM2-206ENST00000474617 C2orf88Q9BSF0 95 aa16.08■□□□□ 0.16
CCM2-206ENST00000474617 GCN1Q92616 2671 aaKnown RBP16.08■□□□□ 0.16
CCM2-206ENST00000474617 KNCNA6PVL3 124 aa16.07■□□□□ 0.16
CCM2-206ENST00000474617 LY6G6DO95868 133 aa16.07■□□□□ 0.16
CCM2-206ENST00000474617 GATA1P15976 413 aaPredicted RBP16.07■□□□□ 0.16
CCM2-206ENST00000474617 RASL10AQ92737 203 aa16.07■□□□□ 0.16
CCM2-206ENST00000474617 GAS8-AS1O95177 125 aa16.06■□□□□ 0.16
CCM2-206ENST00000474617 MGPP08493 103 aa16.06■□□□□ 0.16
CCM2-206ENST00000474617 ATOH7Q8N100 152 aa16.06■□□□□ 0.16
CCM2-206ENST00000474617 AKAP9Q99996 3911 aa16.05■□□□□ 0.16
CCM2-206ENST00000474617 TRAV26-2A0A0B4J265 109 aa16.05■□□□□ 0.16
CCM2-206ENST00000474617 IGLL1P15814 213 aa16.05■□□□□ 0.16
CCM2-206ENST00000474617 LINC00315P59091 139 aa16.05■□□□□ 0.16
CCM2-206ENST00000474617 GOLT1BQ9Y3E0 138 aa16.05■□□□□ 0.16
CCM2-206ENST00000474617 HIVEP2P31629 2446 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 A0A1W2PRX2 142 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 CBY3A6NI87 242 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 INSP01308 110 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 NDUFA11Q86Y39 141 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 MRPS16Q9Y3D3 137 aaKnown RBP16.04■□□□□ 0.16
CCM2-206ENST00000474617 TRBV6-5A0A0K0K1A5 114 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 OR11H12B2RN74 326 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 TCAPO15273 167 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 TMEM158Q8WZ71 300 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 PMCHL2Q9BQD1 86 aa16.04■□□□□ 0.16
CCM2-206ENST00000474617 HNRNPA3P51991 378 aaKnown RBP16.03■□□□□ 0.16
CCM2-206ENST00000474617 NUTF2P61970 127 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms