RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 TCF15Q12870 199 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 FAM104AQ969W3 186 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 H3BVH4 76 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 NXPH4O95158 308 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 IFITM1P13164 125 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 LY6G5BQ8NDX9 201 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 C20orf173Q96LM9 149 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 M0R381 172 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 RNASE6Q93091 150 aaKnown RBP3.54□□□□□ -1.84
U2SURP-208ENST00000473835 A0A0B4J2C4 111 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 COX7A1P24310 79 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 EMP1P54849 157 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 DEFB121Q5J5C9 76 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 NTN5Q8WTR8 489 aaPredicted RBP3.54□□□□□ -1.84
U2SURP-208ENST00000473835 CCDC140Q96MF4 163 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 INTS1Q8N201 2190 aaKnown RBP3.54□□□□□ -1.84
U2SURP-208ENST00000473835 C9JAW5 83 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 CNIH1O95406 144 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 SRSF9Q13242 221 aaKnown RBP eCLIP3.54□□□□□ -1.84
U2SURP-208ENST00000473835 SCGB1D4Q6XE38 83 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 ZFAND2AQ8N6M9 145 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 U3KQE9 123 aa3.54□□□□□ -1.84
U2SURP-208ENST00000473835 HEATR1Q9H583 2144 aaKnown RBP3.54□□□□□ -1.84
U2SURP-208ENST00000473835 A4D1N5 150 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 EBI3Q14213 229 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 ZNF876PQ49A33 203 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 GAGE2BQ13066 116 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 GAGE2EQ4V326 116 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 GAGE2DQ9UEU5 116 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 CADP27708 2225 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 RNASE3P12724 160 aaKnown RBP3.53□□□□□ -1.84
U2SURP-208ENST00000473835 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
U2SURP-208ENST00000473835 MRPL53Q96EL3 112 aaKnown RBP3.53□□□□□ -1.84
U2SURP-208ENST00000473835 ZNF580Q9UK33 172 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 NCOR1O75376 2440 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 IGHV3-35A0A0C4DH35 117 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 LGALS9O00182 355 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 POLR2KP53803 58 aaKnown RBP3.53□□□□□ -1.84
U2SURP-208ENST00000473835 LINC01620Q4KN68 170 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 IGHV3-66A0A0C4DH42 116 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 SOCS3O14543 225 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 MALRD1Q5VYJ5 2156 aa3.53□□□□□ -1.84
U2SURP-208ENST00000473835 IGHV4OR15-8A0A075B7B6 117 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 A0A087WW49 117 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 IGHV7-81A0A0B4J1V7 117 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TMEM223A0PJW6 202 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 LYNX1G3V0Z9 82 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TRIAP1O43715 76 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 LYNX1P0DP58 116 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 LYRM7Q5U5X0 104 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 SPANXN1Q5VSR9 72 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 APRG1Q8IVJ8 170 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 VPREB3Q9UKI3 123 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TP53TG1Q9Y2A0 90 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 ZNF318Q5VUA4 2279 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TRBV7-7A0A0K0K1E9 115 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 SCGB1C2P0DMR2 95 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 ATMQ13315 3056 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 IGHV1-69DA0A0B4J2H0 117 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 E7EQL1 145 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 H7C423 109 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 M0R2P5 195 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 C15orf53Q8NAA6 179 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 FAM57AQ8TBR7 257 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TIMD4Q96H15 378 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 PPDPFQ9H3Y8 114 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 DPH3P1Q9H4G8 78 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 LRBAP50851 2863 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 J3QQQ9 107 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 SNCGO76070 127 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 MUSTN1Q8IVN3 82 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 A0A0G2JNJ9 132 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TRBV30A0A0K0K1B3 111 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 PMVKQ15126 192 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 TIMM17AQ99595 171 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 Q9UFV3 132 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 AHCTF1Q8WYP5 2266 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 PIEZO2Q9H5I5 2752 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 GVINP1Q7Z2Y8 2422 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 HIF1ANQ9NWT6 349 aa3.52□□□□□ -1.85
U2SURP-208ENST00000473835 A0A0J9YX75 114 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 TTC32Q5I0X7 151 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 DEFB104AQ8WTQ1 72 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 DEFB1P60022 68 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 CHCHD5Q9BSY4 110 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 HRNRQ86YZ3 2850 aaPredicted RBP3.51□□□□□ -1.85
U2SURP-208ENST00000473835 MED14OSP0DP75 135 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 OPRPNQ99935 248 aaPredicted RBP3.51□□□□□ -1.85
U2SURP-208ENST00000473835 VPS13CQ709C8 3753 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 IGHV3OR16-13A0A075B7E8 117 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 IGHV3-74A0A0B4J1X5 117 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 OR10J6PQ8NGY7 276 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 SMCR5Q8TEV8 140 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 FAM240AA0A1B0GVK7 77 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 MRPL23Q16540 153 aaKnown RBP3.51□□□□□ -1.85
U2SURP-208ENST00000473835 C15orf32Q32M92 178 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 Q6ZSV7 163 aa3.51□□□□□ -1.85
U2SURP-208ENST00000473835 CLEC3BP05452 202 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 297.6 ms