RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 NOP16Q9Y3C1 178 aaKnown RBP0.33□□□□□ -2.36
PRPF40A-208ENST00000472760 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
PRPF40A-208ENST00000472760 ARAP1Q96P48 1450 aa0.33□□□□□ -2.36
PRPF40A-208ENST00000472760 MYH1P12882 1939 aa0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 RBBP6Q7Z6E9 1792 aaKnown RBP0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 AFDNP55196 1824 aaKnown RBP0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 TNCP24821 2201 aa0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 YPEL1O60688 119 aa0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 PYYP10082 97 aa0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 CLLU1Q5K131 121 aa0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 BET1LQ9NYM9 111 aa0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 DLEC1Q9Y238 1755 aa0.32□□□□□ -2.36
PRPF40A-208ENST00000472760 TRAV12-2A0A075B6T6 113 aa0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 MCRIP1C9JLW8 97 aa0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 ZNF670-ZNF695F2Z2N8 137 aa0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 DBIP07108 87 aaKnown RBP0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 ATP6V0E2Q8NHE4 81 aa0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 DYNLRB2Q8TF09 96 aa0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 AIF1LQ9BQI0 150 aa0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
PRPF40A-208ENST00000472760 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
PRPF40A-208ENST00000472760 TCRBV3S1A0A5B6 114 aa0.3□□□□□ -2.36
PRPF40A-208ENST00000472760 PROK2Q9HC23 129 aa0.3□□□□□ -2.36
PRPF40A-208ENST00000472760 UHRF1BP1LA0JNW5 1464 aa0.29□□□□□ -2.36
PRPF40A-208ENST00000472760 F2Z2F3 143 aa0.29□□□□□ -2.36
PRPF40A-208ENST00000472760 VMO1Q7Z5L0 202 aa0.29□□□□□ -2.36
PRPF40A-208ENST00000472760 KDM6BO15054 1643 aa0.28□□□□□ -2.36
PRPF40A-208ENST00000472760 SLC25A6P12236 298 aa0.28□□□□□ -2.36
PRPF40A-208ENST00000472760 PRR15LQ9BU68 103 aa0.28□□□□□ -2.36
PRPF40A-208ENST00000472760 XIRP1Q702N8 1843 aaKnown RBP0.28□□□□□ -2.36
PRPF40A-208ENST00000472760 NAV2Q8IVL1 2488 aa0.28□□□□□ -2.36
PRPF40A-208ENST00000472760 NINQ8N4C6 2090 aa0.27□□□□□ -2.37
PRPF40A-208ENST00000472760 J3QLW9 94 aa0.27□□□□□ -2.37
PRPF40A-208ENST00000472760 ELOF1P60002 83 aaKnown RBP0.27□□□□□ -2.37
PRPF40A-208ENST00000472760 DR1Q01658 176 aa0.27□□□□□ -2.37
PRPF40A-208ENST00000472760 ATP11AUNQ6ZP68 121 aa0.27□□□□□ -2.37
PRPF40A-208ENST00000472760 CYP2G1PQ6ZSU1 146 aa0.27□□□□□ -2.37
PRPF40A-208ENST00000472760 HELZP42694 1942 aaKnown RBP0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 SCGB1A1P11684 91 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 MORN2Q502X0 79 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 OR2T2Q6IF00 324 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 AKAP14Q86UN6 197 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 NDUFA11Q86Y39 141 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 PYDC1Q8WXC3 89 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 ERG28Q9UKR5 140 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 LSM2Q9Y333 95 aaKnown RBP0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 ANKRD30AQ9BXX3 1397 aa0.26□□□□□ -2.37
PRPF40A-208ENST00000472760 BDP1A6H8Y1 2624 aa0.25□□□□□ -2.37
PRPF40A-208ENST00000472760 ESPL1Q14674 2120 aa0.25□□□□□ -2.37
PRPF40A-208ENST00000472760 EMX2Q04743 252 aa0.25□□□□□ -2.37
PRPF40A-208ENST00000472760 IFI27L1Q96BM0 104 aa0.25□□□□□ -2.37
PRPF40A-208ENST00000472760 RBAKDNA6NC62 111 aa0.24□□□□□ -2.37
PRPF40A-208ENST00000472760 M0R2P5 195 aa0.24□□□□□ -2.37
PRPF40A-208ENST00000472760 SPAG17Q6Q759 2223 aa0.23□□□□□ -2.37
PRPF40A-208ENST00000472760 TANC1Q9C0D5 1861 aa0.23□□□□□ -2.37
PRPF40A-208ENST00000472760 CCDC179H3BU77 68 aa0.23□□□□□ -2.37
PRPF40A-208ENST00000472760 NCS1P62166 190 aa0.23□□□□□ -2.37
PRPF40A-208ENST00000472760 MMGT1Q8N4V1 131 aa0.23□□□□□ -2.37
PRPF40A-208ENST00000472760 BPESC1Q9GZL8 116 aa0.23□□□□□ -2.37
PRPF40A-208ENST00000472760 PTPRMP28827 1452 aa0.22□□□□□ -2.37
PRPF40A-208ENST00000472760 COX4I1P13073 169 aa0.21□□□□□ -2.38
PRPF40A-208ENST00000472760 CDK13Q14004 1512 aaKnown RBP0.2□□□□□ -2.38
PRPF40A-208ENST00000472760 TRBV20-1A0A075B6N2 111 aa0.2□□□□□ -2.38
PRPF40A-208ENST00000472760 ERCC6Q03468 1493 aa0.2□□□□□ -2.38
PRPF40A-208ENST00000472760 SOGA1O94964 1423 aa0.2□□□□□ -2.38
PRPF40A-208ENST00000472760 SYNJ1O43426 1573 aa0.19□□□□□ -2.38
PRPF40A-208ENST00000472760 CASZ1Q86V15 1759 aa0.19□□□□□ -2.38
PRPF40A-208ENST00000472760 CCL3L1P16619 93 aa0.19□□□□□ -2.38
PRPF40A-208ENST00000472760 SSBP1Q04837 148 aaKnown RBP0.19□□□□□ -2.38
PRPF40A-208ENST00000472760 C4orf33Q8N1A6 199 aa0.19□□□□□ -2.38
PRPF40A-208ENST00000472760 MAP2P11137 1827 aaKnown RBP0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 SPINK1P00995 79 aa0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 NPC2P61916 151 aa0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 FAM74A4Q5TZK3 123 aa0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 SAR1AQ9NR31 198 aa0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 OVOS2A0A0J9YW53 1432 aa0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 OVOS2Q6IE36 1432 aa0.18□□□□□ -2.38
PRPF40A-208ENST00000472760 GVQW2A0A096LPI5 108 aaPredicted RBP0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 TRAV12-3A0A0B4J271 114 aa0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 HIST1H1AQ02539 215 aaPredicted RBP0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 SPCS2Q15005 226 aa0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 SLC48A1Q6P1K1 146 aa0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 C20orf197Q8N268 126 aa0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 SMIM11BQ8TCY0 68 aa0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 TPRP12270 2363 aaKnown RBP0.17□□□□□ -2.38
PRPF40A-208ENST00000472760 PLXNA2O75051 1894 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 LAMC3Q9Y6N6 1575 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 MAST4O15021 2626 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 A0A087WTM6 91 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 APODP05090 189 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 CKS1BP61024 79 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 Q5BKY6 102 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 LINC01545Q5VT33 79 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 COX7B2Q8TF08 81 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 LZICQ8WZA0 190 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 NDUFA12Q9UI09 145 aa0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 ZNF142P52746 1687 aaPredicted RBP0.16□□□□□ -2.38
PRPF40A-208ENST00000472760 TTC28Q96AY4 2481 aa0.15□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms