RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 IGHV3-35A0A0C4DH35 117 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 PLNP26678 52 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 NRACQ8N912 160 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
SCAMP4-207ENST00000472442 OR11H12B2RN74 326 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 FOXI1Q12951 378 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 OR11H1Q8NG94 326 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 OR11H2Q8NH07 326 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 GEMIN7Q9H840 131 aaKnown RBP10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 LINC00527Q9UJ94 153 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 IGKV3D-20A0A0C4DH25 116 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 CCDC140Q96MF4 163 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 C11orf21Q9P2W6 132 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 CLEC3BP05452 202 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 CRYBA4P53673 196 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 LY6EQ16553 131 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 RNF182Q8N6D2 247 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 C1QTNF4Q9BXJ3 329 aa10.08□□□□□ -0.8
SCAMP4-207ENST00000472442 ZANQ9Y493 2812 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 USP9YO00507 2555 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.07□□□□□ -0.82e-9■■□□□ 11.4
SCAMP4-207ENST00000472442 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 SLC25A16P16260 332 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 SMCPP49901 116 aaPredicted RBP10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 C8orf86Q6ZUL3 223 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 MAPK1IP1LQ8NDC0 245 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 KLK15Q9H2R5 256 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 CDIP1Q9H305 208 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 MRPL16Q9NX20 251 aaKnown RBP10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 PTPN13Q12923 2485 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 F8VRH5 84 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 H3BUX3 64 aa10.07□□□□□ -0.8
SCAMP4-207ENST00000472442 CFAP126Q5VTH2 177 aa10.06□□□□□ -0.8
SCAMP4-207ENST00000472442 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
SCAMP4-207ENST00000472442 A6NDX4 124 aa10.06□□□□□ -0.8
SCAMP4-207ENST00000472442 H7C1H1 209 aa10.06□□□□□ -0.8
SCAMP4-207ENST00000472442 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 FHL3Q13643 280 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 GLMPQ8WWB7 406 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 ZFAND3Q9H8U3 227 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 CLEC19AQ6UXS0 136 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 Q6ZS46 218 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 LINC01619G3V211 115 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 LINC01356Q8N9X3 169 aa10.05□□□□□ -0.8
SCAMP4-207ENST00000472442 ZNF469Q96JG9 3925 aaPredicted RBP10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 LOC107984156A0A0G2JMH3 177 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 IGHV7-4-1A0A0J9YVY3 117 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 GATA3P23771 443 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 BLCAPP62952 87 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 ARL17AQ8IVW1 177 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 CSPG4Q6UVK1 2322 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 PRSS47A8MTI9 375 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 PSMB2P49721 201 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 TMEM78Q5T7P6 136 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 Q6ZQT7 251 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 ATP6V0E2Q8NHE4 81 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 PTH2Q96A98 100 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 ABCA12Q86UK0 2595 aa10.04□□□□□ -0.8
SCAMP4-207ENST00000472442 IGHV3-66A0A0C4DH42 116 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 IGF1P05019 195 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 CLPSL1A2RUU4 121 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 SCGB2A1O75556 95 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 IGHG2P01859 326 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 XGP55808 180 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 SCGB3A1Q96QR1 104 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
SCAMP4-207ENST00000472442 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.8
SCAMP4-207ENST00000472442 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.8
SCAMP4-207ENST00000472442 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.8
SCAMP4-207ENST00000472442 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 RNF223E7ERA6 249 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 TSPAN13O95857 204 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 Q6ZUT4 128 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 PLEKHB2Q96CS7 222 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 IGHV3OR16-13A0A075B7E8 117 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 IGHV3-74A0A0B4J1X5 117 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 ZNF815PA8K554 130 aa10.02□□□□□ -0.81
SCAMP4-207ENST00000472442 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
SCAMP4-207ENST00000472442 TGFAP01135 160 aa10.01□□□□□ -0.81
SCAMP4-207ENST00000472442 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.01□□□□□ -0.81
SCAMP4-207ENST00000472442 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
SCAMP4-207ENST00000472442 TENM4Q6N022 2769 aa10.01□□□□□ -0.81
SCAMP4-207ENST00000472442 A6NJY4 79 aa10.01□□□□□ -0.81
SCAMP4-207ENST00000472442 H3BVH4 76 aa10.01□□□□□ -0.81
SCAMP4-207ENST00000472442 BUB3O43684 328 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms