RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 HHLA3Q9XRX5 114 aa10.67□□□□□ -0.7
SDC3-203ENST00000471567 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
SDC3-203ENST00000471567 PGPEP1LA6NFU8 196 aa10.66□□□□□ -0.7
SDC3-203ENST00000471567 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
SDC3-203ENST00000471567 IGLV2-8P01709 118 aa10.66□□□□□ -0.7
SDC3-203ENST00000471567 CXCL1P09341 107 aa10.66□□□□□ -0.7
SDC3-203ENST00000471567 FAM3BP58499 235 aaPredicted RBP10.66□□□□□ -0.7
SDC3-203ENST00000471567 ZNF575Q86XF7 245 aa10.66□□□□□ -0.7
SDC3-203ENST00000471567 BIN3Q9NQY0 253 aa10.66□□□□□ -0.7
SDC3-203ENST00000471567 GRIFINA4D1Z8 144 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 RS1O15537 224 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 PAX4O43316 350 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 SFTA3P0C7M3 94 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 ARMS2P0C7Q2 107 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 CRYBA4P53673 196 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 PRR27Q6MZM9 219 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 FAM210AQ96ND0 272 aa10.65□□□□□ -0.7
SDC3-203ENST00000471567 TRBV20OR9-2A0A075B6H5 130 aa10.64□□□□□ -0.71
SDC3-203ENST00000471567 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
SDC3-203ENST00000471567 H3BVH4 76 aa10.64□□□□□ -0.71
SDC3-203ENST00000471567 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
SDC3-203ENST00000471567 MGST1P10620 155 aaKnown RBP10.64□□□□□ -0.71
SDC3-203ENST00000471567 EIF5A2Q9GZV4 153 aaKnown RBP10.64□□□□□ -0.71
SDC3-203ENST00000471567 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
SDC3-203ENST00000471567 A8MWV9 139 aa10.63□□□□□ -0.71
SDC3-203ENST00000471567 CCL18P55774 89 aa10.63□□□□□ -0.71
SDC3-203ENST00000471567 TOR2AQ5JU69 321 aa10.63□□□□□ -0.71
SDC3-203ENST00000471567 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
SDC3-203ENST00000471567 SYT8Q8NBV8 401 aa10.63□□□□□ -0.71
SDC3-203ENST00000471567 DAZAP1Q96EP5 407 aaKnown RBP10.63□□□□□ -0.71
SDC3-203ENST00000471567 A0A096LPF7 62 aa10.62□□□□□ -0.71
SDC3-203ENST00000471567 C19orf71A6NCJ1 209 aa10.62□□□□□ -0.71
SDC3-203ENST00000471567 RPL19P84098 196 aaKnown RBP10.62□□□□□ -0.71
SDC3-203ENST00000471567 PARLQ9H300 379 aa10.62□□□□□ -0.71
SDC3-203ENST00000471567 PHLDA3Q9Y5J5 127 aa10.62□□□□□ -0.71
SDC3-203ENST00000471567 ICOSQ9Y6W8 199 aa10.62□□□□□ -0.71
SDC3-203ENST00000471567 VPS13DQ5THJ4 4388 aa10.62□□□□□ -0.71
SDC3-203ENST00000471567 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
SDC3-203ENST00000471567 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
SDC3-203ENST00000471567 MRPL23Q16540 153 aaKnown RBP10.61□□□□□ -0.71
SDC3-203ENST00000471567 DMRTA1Q5VZB9 504 aa10.61□□□□□ -0.71
SDC3-203ENST00000471567 ZFP2Q6ZN57 461 aa10.61□□□□□ -0.71
SDC3-203ENST00000471567 OR5AL1P0C617 328 aa10.6□□□□□ -0.71
SDC3-203ENST00000471567 ZFP82Q8N141 532 aa10.6□□□□□ -0.71
SDC3-203ENST00000471567 OCC1Q8TAD7 63 aa10.6□□□□□ -0.71
SDC3-203ENST00000471567 SSBP4Q9BWG4 385 aaPredicted RBP10.6□□□□□ -0.71
SDC3-203ENST00000471567 LINC00588Q9Y4M8 146 aa10.6□□□□□ -0.71
SDC3-203ENST00000471567 HYDINQ4G0P3 5121 aa10.6□□□□□ -0.71
SDC3-203ENST00000471567 TRBV6-4A0A1B0GX49 114 aa10.59□□□□□ -0.71
SDC3-203ENST00000471567 SNAI2O43623 268 aa10.59□□□□□ -0.71
SDC3-203ENST00000471567 P01737 135 aa10.59□□□□□ -0.71
SDC3-203ENST00000471567 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
SDC3-203ENST00000471567 ESRGQ1W209 222 aa10.59□□□□□ -0.71
SDC3-203ENST00000471567 OR2D3Q8NGH3 330 aa10.59□□□□□ -0.71
SDC3-203ENST00000471567 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
SDC3-203ENST00000471567 LY96Q9Y6Y9 160 aa10.59□□□□□ -0.71
SDC3-203ENST00000471567 NACAE9PAV3 2078 aa10.59□□□□□ -0.71
SDC3-203ENST00000471567 XKRY2A2RUG3 117 aa10.58□□□□□ -0.72
SDC3-203ENST00000471567 K7EQD1 137 aa10.58□□□□□ -0.72
SDC3-203ENST00000471567 M0R381 172 aa10.58□□□□□ -0.72
SDC3-203ENST00000471567 RHODO00212 210 aa10.58□□□□□ -0.72
SDC3-203ENST00000471567 GYPEP15421 78 aa10.58□□□□□ -0.72
SDC3-203ENST00000471567 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
SDC3-203ENST00000471567 NXPH4O95158 308 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 SRIP30626 198 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 CEBPGP53567 150 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 RAB14P61106 215 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 RHOHQ15669 191 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 UFSP1Q6NVU6 142 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 SH2D6Q7Z4S9 175 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 SLC25A29Q8N8R3 303 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 NUDT10Q8NFP7 164 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 ZNRF2Q8NHG8 242 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 NUDT11Q96G61 164 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 PRADC1Q9BSG0 188 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 UPK3BQ9BT76 320 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 SMDT1Q9H4I9 107 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 JPT2Q9H910 190 aa10.57□□□□□ -0.72
SDC3-203ENST00000471567 MRPS16Q9Y3D3 137 aaKnown RBP10.57□□□□□ -0.72
SDC3-203ENST00000471567 KMT2AQ03164 3969 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 K7EN84 100 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 IFITM2Q01629 132 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 PEA15Q15121 130 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 OR10AG1Q8NH19 301 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 SMIM7Q9BQ49 75 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 SAMD10Q9BYL1 202 aa10.56□□□□□ -0.72
SDC3-203ENST00000471567 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
SDC3-203ENST00000471567 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
SDC3-203ENST00000471567 SPANXN1Q5VSR9 72 aa10.55□□□□□ -0.72
SDC3-203ENST00000471567 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
SDC3-203ENST00000471567 DNAH6Q9C0G6 4158 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 F2Z2F3 143 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 CRYGDP07320 174 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 FAM74A3Q4VXF1 159 aa10.54□□□□□ -0.72
SDC3-203ENST00000471567 LYPD5Q6UWN5 251 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms