RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 PRIMA1Q86XR5 153 aa8.2□□□□□ -1.1
RRP1B-202ENST00000470886 RNF183Q96D59 192 aa8.2□□□□□ -1.1
RRP1B-202ENST00000470886 CHCHD5Q9BSY4 110 aa8.2□□□□□ -1.1
RRP1B-202ENST00000470886 K7ERJ3 54 aa8.19□□□□□ -1.1
RRP1B-202ENST00000470886 FGF6P10767 208 aa8.19□□□□□ -1.1
RRP1B-202ENST00000470886 FOXE3Q13461 319 aa8.19□□□□□ -1.1
RRP1B-202ENST00000470886 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
RRP1B-202ENST00000470886 PLCE1Q9P212 2302 aa8.19□□□□□ -1.1
RRP1B-202ENST00000470886 BPTFQ12830 3046 aa8.19□□□□□ -1.1
RRP1B-202ENST00000470886 TRGV1A0A0A0MS02 117 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 ELANEP08246 267 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 MYCNOSP40205 109 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 UTF1Q5T230 341 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 NDUFA12Q9UI09 145 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 MALP21145 153 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 SYNJ2BPP57105 145 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 ODF1Q14990 250 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 RUSC1-AS1Q66K80 236 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 C15orf53Q8NAA6 179 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 CACNA1GO43497 2377 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 CFC1P0CG37 223 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 GDF5OSQ5U4N7 250 aa8.18□□□□□ -1.1
RRP1B-202ENST00000470886 TRAV8-3A0A0A6YYJ7 113 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 DEFB131AP59861 70 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 E9PLD3 99 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 M0QXV9 152 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 Q8N9W7 124 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 LY6DQ14210 128 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
RRP1B-202ENST00000470886 HERVK_113P63121 156 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 TCF15Q12870 199 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 CHD3Q12873 2000 aaKnown RBP8.16□□□□□ -1.1
RRP1B-202ENST00000470886 TCTEX1D4Q5JR98 221 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 RNF152Q8N8N0 203 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 PIFOQ8TCI5 191 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 G3V4G9 280 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 GNLYP22749 145 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 MSRB1Q9NZV6 116 aa8.16□□□□□ -1.1
RRP1B-202ENST00000470886 LINC01619G3V211 115 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 PAX4O43316 350 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 CRYGBP07316 175 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 IGLC6P0CF74 106 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 FXYD2P54710 66 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 Q8N7P7 452 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 PTH2Q96A98 100 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 A0A0U1RRA0 63 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 K7EMT4 169 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 GATA1P15976 413 aaPredicted RBP8.15□□□□□ -1.1
RRP1B-202ENST00000470886 NBL1P41271 181 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 FANCD2OSQ96PS1 177 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 PCNX2A6NKB5 2137 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 MED13Q9UHV7 2174 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 AMTNQ6UX39 209 aa8.15□□□□□ -1.1
RRP1B-202ENST00000470886 NPC2P61916 151 aa8.15□□□□□ -1.11
RRP1B-202ENST00000470886 LINC00322Q6ZN03 302 aaPredicted RBP8.15□□□□□ -1.11
RRP1B-202ENST00000470886 LCNL1Q6ZST4 164 aa8.15□□□□□ -1.11
RRP1B-202ENST00000470886 POLEQ07864 2286 aa8.15□□□□□ -1.11
RRP1B-202ENST00000470886 IGHG4P01861 327 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
RRP1B-202ENST00000470886 SH2D6Q7Z4S9 175 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 ACYP1P07311 99 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 ZFP2Q6ZN57 461 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 C1orf229Q6ZS94 237 aaPredicted RBP8.14□□□□□ -1.11
RRP1B-202ENST00000470886 U3KQK5 164 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 TEN1Q86WV5 123 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 KLK9Q9UKQ9 250 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 MED12LQ86YW9 2145 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 TMEM89A2RUT3 159 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 C6orf226Q5I0X4 101 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 RETNQ9HD89 108 aa8.14□□□□□ -1.11
RRP1B-202ENST00000470886 TRAV13-2A0A0B4J235 113 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 TRAV13-1A0A0B4J241 112 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 GNRH2O43555 120 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 SS18Q15532 418 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 C1orf195Q5TG92 126 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 KLHL30-AS1Q8NEE0 82 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 PHLDA1Q8WV24 401 aaPredicted RBP8.13□□□□□ -1.11
RRP1B-202ENST00000470886 GATD1Q8NB37 220 aa8.13□□□□□ -1.11
RRP1B-202ENST00000470886 A0A1W2PRX2 142 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 SUMO4Q6EEV6 95 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 C5orf56Q8N8D9 126 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 ODF3BA8MYP8 253 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 RIF1Q5UIP0 2472 aaKnown RBP8.12□□□□□ -1.11
RRP1B-202ENST00000470886 KNCNA6PVL3 124 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 DEFB104AQ8WTQ1 72 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 BAALCQ8WXS3 180 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 TMEM243Q9BU79 118 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 TM2D2Q9BX73 214 aa8.12□□□□□ -1.11
RRP1B-202ENST00000470886 PRAC2D3DTV9 90 aa8.11□□□□□ -1.11
RRP1B-202ENST00000470886 SPTAN1Q13813 2472 aaKnown RBP8.11□□□□□ -1.11
RRP1B-202ENST00000470886 RPL39LQ96EH5 51 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms