RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 MUC4Q99102 2169 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 IGHV4-4A0A075B6R2 117 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 TRAV10A0A0B4J240 114 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 INSP01308 110 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 AMBPP02760 352 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 TMEM88Q6PEY1 159 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 ZNF705AQ6ZN79 300 aaPredicted RBP8.23□□□□□ -1.09
HLA-C-206ENST00000470363 LINC01587Q99440 93 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 TP53TG3Q9ULZ0 132 aa8.23□□□□□ -1.09
HLA-C-206ENST00000470363 IGHV1OR15-1A0A075B7D0 117 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 A0A087WWC5 75 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 TYMSP04818 313 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 FAM3BP58499 235 aaPredicted RBP8.22□□□□□ -1.09
HLA-C-206ENST00000470363 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 FAM159AQ6UWV7 190 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 CBLN2Q8IUK8 224 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 NEU1Q99519 415 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 TMEM208Q9BTX3 173 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 PCLOQ9Y6V0 5065 aa8.22□□□□□ -1.09
HLA-C-206ENST00000470363 PKHD1P08F94 4074 aa8.21□□□□□ -1.09
HLA-C-206ENST00000470363 A8MWL6 223 aa8.21□□□□□ -1.1
HLA-C-206ENST00000470363 SSTP61278 116 aa8.21□□□□□ -1.1
HLA-C-206ENST00000470363 GTSF1Q8WW33 167 aa8.21□□□□□ -1.1
HLA-C-206ENST00000470363 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.1
HLA-C-206ENST00000470363 IL36BQ9NZH7 164 aa8.21□□□□□ -1.1
HLA-C-206ENST00000470363 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
HLA-C-206ENST00000470363 URGCP-MRPS24S4R325 110 aa8.21□□□□□ -1.1
HLA-C-206ENST00000470363 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 A0A1B0GVY2 172 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 CBY3A6NI87 242 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 SPINK4O60575 86 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 AZU1P20160 251 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 RPS20P60866 119 aaKnown RBP8.2□□□□□ -1.1
HLA-C-206ENST00000470363 TSKUQ8WUA8 353 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 PGLYRP4Q96LB8 373 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 C20orf144Q9BQM9 153 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 TPPP3Q9BW30 176 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 TMEM242Q9NWH2 141 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 GOLT1BQ9Y3E0 138 aa8.2□□□□□ -1.1
HLA-C-206ENST00000470363 DEFB131BA0A096LNP1 70 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 SMIM27A0A1W2PRY6 76 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 H3BVH4 76 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 TDRG1Q3Y452 100 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 CT83Q5H943 113 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 KCNS1Q96KK3 526 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 PYGO2Q9BRQ0 406 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 SMCO4Q9NRQ5 59 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
HLA-C-206ENST00000470363 IGHV3-16A0A0C4DH30 117 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 A0A1W2PPQ1 181 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 XKRY2A2RUG3 117 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 HIGD1CA8MV81 97 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 ARMS2P0C7Q2 107 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 IGLC6P0CF74 106 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 RNASE3P12724 160 aaKnown RBP8.18□□□□□ -1.1
HLA-C-206ENST00000470363 ASIPP42127 132 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 LYZL1Q6UWQ5 148 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 TMEM256Q8N2U0 113 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 FER1L6-AS1Q8NA97 138 aa8.18□□□□□ -1.1
HLA-C-206ENST00000470363 PKD1P98161 4303 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 TGIF2-C20orf24A0A0A6YYL0 155 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 CXCL1P09341 107 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 S100A4P26447 101 aaKnown RBP8.17□□□□□ -1.1
HLA-C-206ENST00000470363 ELOBQ15370 118 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 POM121L12Q8N7R1 296 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 GSN-AS1Q9NRJ2 163 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 NAT8BQ9UHF3 227 aa8.17□□□□□ -1.1
HLA-C-206ENST00000470363 DYNC1H1Q14204 4646 aaKnown RBP8.17□□□□□ -1.1
HLA-C-206ENST00000470363 TRGV11A0A075B6L2 103 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 RTL8CO15255 209 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 S100PP25815 95 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 MRPL54Q6P161 138 aaKnown RBP8.16□□□□□ -1.1
HLA-C-206ENST00000470363 LINC00336Q6ZUF6 198 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 OR10AG1Q8NH19 301 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 LINC00467Q9BRT7 94 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 DKK2Q9UBU2 259 aa8.16□□□□□ -1.1
HLA-C-206ENST00000470363 DNAH11Q96DT5 4516 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 SPART-AS1P0CW21 52 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 P0DMU3 169 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 FAM231AP0DMU4 169 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 FAM231CP0DMU5 169 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 CTRLP40313 264 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 FOXA3P55318 350 aaPredicted RBP8.15□□□□□ -1.1
HLA-C-206ENST00000470363 RRN3P1Q2M238 152 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 DNLZQ5SXM8 178 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 C11orf72Q8NBR9 251 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 C9orf85Q96MD7 179 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 NDUFAF3Q9BU61 184 aa8.15□□□□□ -1.1
HLA-C-206ENST00000470363 SSBP4Q9BWG4 385 aaPredicted RBP8.15□□□□□ -1.1
HLA-C-206ENST00000470363 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms