RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 SGK494Q96LW2 274 aa6.08□□□□□ -1.44
SSBP1-208ENST00000469123 TRGV2A0A075B6R0 118 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 IGHV4-4A0A075B6R2 117 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 TRGV1A0A0A0MS02 117 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 LCE6AA0A183 80 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 SCO2A0A1W2PP80 73 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 IGLL5B9A064 214 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 M0R2P5 195 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 PRM2P04554 102 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 SLAQ13239 276 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 PIK3CD-AS1Q5SR53 167 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 MUC21Q5SSG8 566 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 BAGE2Q86Y30 109 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 SVBPQ8N300 66 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 MTURNQ8N3F0 131 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 RASL10AQ92737 203 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 PTH2Q96A98 100 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 LINC00479Q96M42 142 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 C8orf49Q96NF6 230 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 TENM2Q9NT68 2774 aa6.07□□□□□ -1.44
SSBP1-208ENST00000469123 IGHV3-16A0A0C4DH30 117 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 C1orf196B1AJZ1 125 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 TMEM250H0YL14 139 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 H3BNG1 76 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 TYMSP04818 313 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 CXCL1P09341 107 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 CCL20P78556 96 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 C10orf91Q5T1B1 145 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 LGALS9CQ6DKI2 356 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 C15orf54Q8N8G6 183 aa6.06□□□□□ -1.44
SSBP1-208ENST00000469123 GAGE12BA1L429 117 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 RBFOX3A6NFN3 312 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 B4DEV8 164 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 F5H768 121 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 GAGE7O76087 117 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 GAGE12FP0CL80 117 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 GAGE12GP0CL81 117 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 GAGE12IP0CL82 117 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 HTN3P15516 51 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 S100A4P26447 101 aaKnown RBP6.05□□□□□ -1.44
SSBP1-208ENST00000469123 ASIPP42127 132 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 ZNF80P51504 273 aaPredicted RBP6.05□□□□□ -1.44
SSBP1-208ENST00000469123 LINC01559Q495D7 138 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 ZNF506Q5JVG8 444 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 Q6ZTI0 123 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 LINC00476Q8WZB0 136 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 ZC2HC1AQ96GY0 325 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 MLST8Q9BVC4 326 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 APLNQ9ULZ1 77 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 STARD9Q9P2P6 4700 aa6.05□□□□□ -1.44
SSBP1-208ENST00000469123 C9JCJ5 164 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 M0R143 59 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 SH2D1AO60880 128 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 ORM1P02763 201 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 P0DMU3 169 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 FAM231AP0DMU4 169 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 FAM231CP0DMU5 169 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 GNG4P50150 75 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 FAM3BP58499 235 aaPredicted RBP6.04□□□□□ -1.44
SSBP1-208ENST00000469123 SNRPEP62304 92 aaKnown RBP6.04□□□□□ -1.44
SSBP1-208ENST00000469123 Q6ZQT7 251 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 C9orf85Q96MD7 179 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 SMDT1Q9H4I9 107 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 IL36BQ9NZH7 164 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 MDFICQ9P1T7 246 aa6.04□□□□□ -1.44
SSBP1-208ENST00000469123 TRAV4A0A0B4J268 109 aa6.03□□□□□ -1.44
SSBP1-208ENST00000469123 IGKV3D-20A0A0C4DH25 116 aa6.03□□□□□ -1.44
SSBP1-208ENST00000469123 GNRH2O43555 120 aa6.03□□□□□ -1.44
SSBP1-208ENST00000469123 ZNF25P17030 456 aaPredicted RBP6.03□□□□□ -1.44
SSBP1-208ENST00000469123 HOXA5P20719 270 aa6.03□□□□□ -1.44
SSBP1-208ENST00000469123 CENPWQ5EE01 88 aa6.03□□□□□ -1.44
SSBP1-208ENST00000469123 TMEM88Q6PEY1 159 aa6.03□□□□□ -1.44
SSBP1-208ENST00000469123 SYT8Q8NBV8 401 aa6.03□□□□□ -1.44
SSBP1-208ENST00000469123 DAZAP1Q96EP5 407 aaKnown RBP6.03□□□□□ -1.44
SSBP1-208ENST00000469123 MRPL16Q9NX20 251 aaKnown RBP6.03□□□□□ -1.44
SSBP1-208ENST00000469123 CARHSP1Q9Y2V2 147 aaKnown RBP6.03□□□□□ -1.44
SSBP1-208ENST00000469123 NACAE9PAV3 2078 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 LY6G6CO95867 125 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 MT-ND4LP03901 98 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 CRIP1P50238 77 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 OR5I1Q13606 314 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 OR4C5Q8NGB2 326 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 PACRGQ96M98 296 aaPredicted RBP6.02□□□□□ -1.45
SSBP1-208ENST00000469123 EIF5A2Q9GZV4 153 aaKnown RBP6.02□□□□□ -1.45
SSBP1-208ENST00000469123 C11orf21Q9P2W6 132 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 PRO0255Q9UI72 69 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 LY96Q9Y6Y9 160 aa6.02□□□□□ -1.45
SSBP1-208ENST00000469123 TRGV4A0A0C4DH28 118 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 A0A1B0GV72 72 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 A8MWV9 139 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 RHODO00212 210 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 APOC3P02656 99 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 RNASE3P12724 160 aaKnown RBP6.01□□□□□ -1.45
SSBP1-208ENST00000469123 S100A2P29034 98 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 PEA15Q15121 130 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 ZNF876PQ49A33 203 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 PET117Q6UWS5 81 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 SH2D6Q7Z4S9 175 aa6.01□□□□□ -1.45
SSBP1-208ENST00000469123 ZFP82Q8N141 532 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms