RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RPL7P18124 248 aaKnown RBP10.57□□□□□ -0.72
COL27A1-203ENST00000468565 SRIP30626 198 aa10.57□□□□□ -0.72
COL27A1-203ENST00000468565 LINC00310P59036 64 aa10.57□□□□□ -0.72
COL27A1-203ENST00000468565 SNRPD3P62318 126 aaKnown RBP10.57□□□□□ -0.72
COL27A1-203ENST00000468565 PSG9Q00887 426 aa10.57□□□□□ -0.72
COL27A1-203ENST00000468565 MORN3Q6PF18 240 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-203ENST00000468565 C17orf77Q96MU5 243 aa10.57□□□□□ -0.72
COL27A1-203ENST00000468565 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 SERTM2A0A1B0GWG4 89 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 FAM231BA6NCW3 169 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 ZNF253O75346 499 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 CSN1S1P47710 185 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 PSMG4Q5JS54 123 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 NPIPB6E9PJ23 425 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 NPSP0C0P6 89 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 HBBP68871 147 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 PSG3Q16557 428 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 COL5A1-AS1Q5SY13 56 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 NAGKQ9UJ70 344 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 PSG8Q9UQ74 426 aa10.56□□□□□ -0.72
COL27A1-203ENST00000468565 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
COL27A1-203ENST00000468565 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
COL27A1-203ENST00000468565 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
COL27A1-203ENST00000468565 F2Z2F3 143 aa10.55□□□□□ -0.72
COL27A1-203ENST00000468565 SLAQ13239 276 aa10.55□□□□□ -0.72
COL27A1-203ENST00000468565 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
COL27A1-203ENST00000468565 RYR2Q92736 4967 aa10.55□□□□□ -0.72
COL27A1-203ENST00000468565 CIDEAO60543 219 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 OR11H2Q8NH07 326 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 HSBP1L1C9JCN9 74 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 GIG44P09565 113 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-203ENST00000468565 CAMPP49913 170 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 GDF5OSQ5U4N7 250 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 OR2D3Q8NGH3 330 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 PGLYRP4Q96LB8 373 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 C20orf144Q9BQM9 153 aa10.54□□□□□ -0.72
COL27A1-203ENST00000468565 C11orf68Q9H3H3 251 aaKnown RBP10.54□□□□□ -0.72
COL27A1-203ENST00000468565 FBLL1A6NHQ2 334 aaKnown RBP10.53□□□□□ -0.72
COL27A1-203ENST00000468565 K7EP13 123 aa10.53□□□□□ -0.72
COL27A1-203ENST00000468565 SOCS3O14543 225 aa10.53□□□□□ -0.72
COL27A1-203ENST00000468565 GPX1P07203 203 aa10.53□□□□□ -0.72
COL27A1-203ENST00000468565 ID1P41134 155 aa10.53□□□□□ -0.72
COL27A1-203ENST00000468565 SAMD13Q5VXD3 122 aa10.53□□□□□ -0.72
COL27A1-203ENST00000468565 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
COL27A1-203ENST00000468565 ZNF705FA8MVS1 300 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-203ENST00000468565 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-203ENST00000468565 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-203ENST00000468565 RBX1P62877 108 aa10.52□□□□□ -0.72
COL27A1-203ENST00000468565 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.72
COL27A1-203ENST00000468565 PLECQ15149 4684 aaKnown RBP10.52□□□□□ -0.73
COL27A1-203ENST00000468565 CT45A10P0DMU9 189 aa10.52□□□□□ -0.73
COL27A1-203ENST00000468565 HLA-DRB4P13762 266 aa10.52□□□□□ -0.73
COL27A1-203ENST00000468565 AMTP48728 403 aa10.52□□□□□ -0.73
COL27A1-203ENST00000468565 C18orf32Q8TCD1 76 aa10.52□□□□□ -0.73
COL27A1-203ENST00000468565 MIEN1Q9BRT3 115 aa10.52□□□□□ -0.73
COL27A1-203ENST00000468565 HLA-DRB4X5D2U9 266 aa10.52□□□□□ -0.73
COL27A1-203ENST00000468565 DNAH1Q9P2D7 4330 aa10.51□□□□□ -0.73
COL27A1-203ENST00000468565 NUPR2A6NF83 97 aa10.51□□□□□ -0.73
COL27A1-203ENST00000468565 H3BMM0 161 aa10.51□□□□□ -0.73
COL27A1-203ENST00000468565 M0R3E3 92 aa10.51□□□□□ -0.73
COL27A1-203ENST00000468565 ZNF324O75467 553 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-203ENST00000468565 FAM162BQ5T6X4 162 aa10.51□□□□□ -0.73
COL27A1-203ENST00000468565 ALKBH7Q9BT30 221 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-203ENST00000468565 C20orf202A1L168 122 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 PPBPP02775 128 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-203ENST00000468565 FOXI2Q6ZQN5 318 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 ORAOV1Q8WV07 137 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 SSBP4Q9BWG4 385 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-203ENST00000468565 PMCHP20382 165 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 Q6AWC8 147 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 CSNK1G2-AS1Q8NCQ2 148 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 C1QTNF4Q9BXJ3 329 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 ALMS1Q8TCU4 4167 aa10.5□□□□□ -0.73
COL27A1-203ENST00000468565 RIGQ13278 110 aa10.49□□□□□ -0.73
COL27A1-203ENST00000468565 CLUHP3Q96NS8 147 aa10.49□□□□□ -0.73
COL27A1-203ENST00000468565 A0A087X0K7 114 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 A0A1B0GW15 77 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 MIFP14174 115 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 RPS20P60866 119 aaKnown RBP10.48□□□□□ -0.73
COL27A1-203ENST00000468565 CEMP1Q6PRD7 247 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-203ENST00000468565 ZNF705AQ6ZN79 300 aaPredicted RBP10.48□□□□□ -0.73
COL27A1-203ENST00000468565 Q8NAQ8 132 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 BORCS7Q96B45 105 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 A0A1B0GUT8 65 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 HSBP1O75506 76 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 KRTDAPP60985 99 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 C16orf92Q96LL3 132 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 X6R8D5 127 aa10.48□□□□□ -0.73
COL27A1-203ENST00000468565 IGKV2-40A0A087WW87 121 aaPredicted RBP10.47□□□□□ -0.73
COL27A1-203ENST00000468565 IGKV2D-40P01614 121 aaPredicted RBP10.47□□□□□ -0.73
COL27A1-203ENST00000468565 TEX43Q6ZNM6 134 aa10.47□□□□□ -0.73
COL27A1-203ENST00000468565 COX8CQ7Z4L0 72 aa10.47□□□□□ -0.73
COL27A1-203ENST00000468565 CLEC5AQ9NY25 188 aa10.47□□□□□ -0.73
COL27A1-203ENST00000468565 KLK5Q9Y337 293 aaPredicted RBP10.47□□□□□ -0.73
COL27A1-203ENST00000468565 NTF3P20783 257 aa10.46□□□□□ -0.73
COL27A1-203ENST00000468565 CRIP1P50238 77 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms