RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 GNRH2O43555 120 aa13.12□□□□□ -0.31
COL7A1-207ENST00000467985 ORM1P02763 201 aa13.12□□□□□ -0.31
COL7A1-207ENST00000467985 CEBPGP53567 150 aa13.12□□□□□ -0.31
COL7A1-207ENST00000467985 TMEM75Q8N9X5 138 aa13.12□□□□□ -0.31
COL7A1-207ENST00000467985 ZNF479Q96JC4 524 aa13.12□□□□□ -0.31
COL7A1-207ENST00000467985 SGK494Q96LW2 274 aa13.12□□□□□ -0.31
COL7A1-207ENST00000467985 TRAV4A0A0B4J268 109 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 TRAV34A0A0B4J273 112 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 NXPH4O95158 308 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 FLI1Q01543 452 aaPredicted RBP13.11□□□□□ -0.31
COL7A1-207ENST00000467985 PEA15Q15121 130 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 NEGR1Q7Z3B1 354 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 ZNF575Q86XF7 245 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 FMC1Q96HJ9 113 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 MED9Q9NWA0 146 aa13.11□□□□□ -0.31
COL7A1-207ENST00000467985 TYMSP04818 313 aa13.1□□□□□ -0.31
COL7A1-207ENST00000467985 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
COL7A1-207ENST00000467985 SFTA3P0C7M3 94 aa13.1□□□□□ -0.31
COL7A1-207ENST00000467985 SRIP30626 198 aa13.1□□□□□ -0.31
COL7A1-207ENST00000467985 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
COL7A1-207ENST00000467985 OR4C5Q8NGB2 326 aa13.1□□□□□ -0.31
COL7A1-207ENST00000467985 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
COL7A1-207ENST00000467985 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
COL7A1-207ENST00000467985 C11orf52Q96A22 123 aa13.09□□□□□ -0.31
COL7A1-207ENST00000467985 LINC00479Q96M42 142 aa13.09□□□□□ -0.31
COL7A1-207ENST00000467985 PCLOQ9Y6V0 5065 aa13.08□□□□□ -0.31
COL7A1-207ENST00000467985 C16orf90A8MZG2 172 aa13.08□□□□□ -0.32
COL7A1-207ENST00000467985 C9JCJ5 164 aa13.08□□□□□ -0.32
COL7A1-207ENST00000467985 K7EQD1 137 aa13.08□□□□□ -0.32
COL7A1-207ENST00000467985 GCGP01275 180 aa13.08□□□□□ -0.32
COL7A1-207ENST00000467985 PFN1P07737 140 aaKnown RBP13.08□□□□□ -0.32
COL7A1-207ENST00000467985 GYPEP15421 78 aa13.08□□□□□ -0.32
COL7A1-207ENST00000467985 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
COL7A1-207ENST00000467985 Q86TA4 180 aa13.08□□□□□ -0.32
COL7A1-207ENST00000467985 TMEM250H0YL14 139 aa13.07□□□□□ -0.32
COL7A1-207ENST00000467985 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
COL7A1-207ENST00000467985 ZNF674Q2M3X9 581 aa13.07□□□□□ -0.32
COL7A1-207ENST00000467985 SH2D6Q7Z4S9 175 aa13.07□□□□□ -0.32
COL7A1-207ENST00000467985 TRAV9-2A0A087WT02 112 aa13.06□□□□□ -0.32
COL7A1-207ENST00000467985 RAB19A4D1S5 217 aa13.06□□□□□ -0.32
COL7A1-207ENST00000467985 K7EP13 123 aa13.06□□□□□ -0.32
COL7A1-207ENST00000467985 CIDEAO60543 219 aa13.06□□□□□ -0.32
COL7A1-207ENST00000467985 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
COL7A1-207ENST00000467985 ZNF80P51504 273 aaPredicted RBP13.06□□□□□ -0.32
COL7A1-207ENST00000467985 RYR1P21817 5038 aa13.06□□□□□ -0.32
COL7A1-207ENST00000467985 LINC00315P59091 139 aa13.05□□□□□ -0.32
COL7A1-207ENST00000467985 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
COL7A1-207ENST00000467985 COMMD7Q86VX2 200 aa13.05□□□□□ -0.32
COL7A1-207ENST00000467985 DERL1Q9BUN8 251 aa13.05□□□□□ -0.32
COL7A1-207ENST00000467985 SMDT1Q9H4I9 107 aa13.05□□□□□ -0.32
COL7A1-207ENST00000467985 ZFP30Q9Y2G7 519 aa13.05□□□□□ -0.32
COL7A1-207ENST00000467985 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
COL7A1-207ENST00000467985 SRP19P09132 144 aaKnown RBP13.04□□□□□ -0.32
COL7A1-207ENST00000467985 GNG4P50150 75 aa13.04□□□□□ -0.32
COL7A1-207ENST00000467985 BAGE2Q86Y30 109 aa13.04□□□□□ -0.32
COL7A1-207ENST00000467985 PTH2Q96A98 100 aa13.04□□□□□ -0.32
COL7A1-207ENST00000467985 PARLQ9H300 379 aa13.04□□□□□ -0.32
COL7A1-207ENST00000467985 C11orf21Q9P2W6 132 aa13.04□□□□□ -0.32
COL7A1-207ENST00000467985 TRBV6-1A0A0K0K1D8 114 aa13.03□□□□□ -0.32
COL7A1-207ENST00000467985 GATA1P15976 413 aaPredicted RBP13.03□□□□□ -0.32
COL7A1-207ENST00000467985 SRSF3P84103 164 aaKnown RBP13.03□□□□□ -0.32
COL7A1-207ENST00000467985 CENPWQ5EE01 88 aa13.03□□□□□ -0.32
COL7A1-207ENST00000467985 SPATA12Q7Z6I5 190 aa13.03□□□□□ -0.32
COL7A1-207ENST00000467985 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
COL7A1-207ENST00000467985 KRTAP17-1Q9BYP8 105 aa13.03□□□□□ -0.32
COL7A1-207ENST00000467985 LY96Q9Y6Y9 160 aa13.03□□□□□ -0.32
COL7A1-207ENST00000467985 CDK2AP2O75956 126 aa13.02□□□□□ -0.33
COL7A1-207ENST00000467985 LTAP01374 205 aa13.02□□□□□ -0.33
COL7A1-207ENST00000467985 NHLRC2Q8NBF2 726 aa13.02□□□□□ -0.33
COL7A1-207ENST00000467985 C9orf85Q96MD7 179 aa13.02□□□□□ -0.33
COL7A1-207ENST00000467985 SMIM7Q9BQ49 75 aa13.02□□□□□ -0.33
COL7A1-207ENST00000467985 MGST1P10620 155 aaKnown RBP13.01□□□□□ -0.33
COL7A1-207ENST00000467985 EVI2AP22794 236 aa13.01□□□□□ -0.33
COL7A1-207ENST00000467985 TIRAPP58753 221 aa13.01□□□□□ -0.33
COL7A1-207ENST00000467985 Q6ZRN7 208 aaPredicted RBP13.01□□□□□ -0.33
COL7A1-207ENST00000467985 LRP1BQ9NZR2 4599 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 LINC00862A6NCI5 91 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 FABP5P3A8MUU1 101 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 ZNF727A8MUV8 499 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 RS1O15537 224 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 CFAP126Q5VTH2 177 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 UQCC3Q6UW78 93 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 PRADC1Q9BSG0 188 aa13□□□□□ -0.33
COL7A1-207ENST00000467985 TRBV6-4A0A1B0GX49 114 aa12.99□□□□□ -0.33
COL7A1-207ENST00000467985 PRR27Q6MZM9 219 aa12.99□□□□□ -0.33
COL7A1-207ENST00000467985 C9JQL5 133 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 EREGO14944 169 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 DNAH10OSP0CZ25 163 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 RNASE3P12724 160 aaKnown RBP12.98□□□□□ -0.33
COL7A1-207ENST00000467985 S100A4P26447 101 aaKnown RBP12.98□□□□□ -0.33
COL7A1-207ENST00000467985 RHOHQ15669 191 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 FAM74A3Q4VXF1 159 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 PIK3CD-AS1Q5SR53 167 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 WFDC10BQ8IUB3 73 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 SLC25A29Q8N8R3 303 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 ZC2HC1AQ96GY0 325 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
COL7A1-207ENST00000467985 LOC100131303A0A0U1RQF7 123 aa12.97□□□□□ -0.33
COL7A1-207ENST00000467985 ASIPP42127 132 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms